RNA–Protein interactions for RNA: ENSMUST00000021864.7

Ssr1-201, Transcript of Translocon-associated protein subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr1, Length 9,333 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-201ENSMUST00000021864 Gm19402J3QJV4 266 aa3.62□□□□□ -1.83
Ssr1-201ENSMUST00000021864 Krtap3-2Q9D638 99 aa3.61□□□□□ -1.83
Ssr1-201ENSMUST00000021864 Krtap3-3Q9D7P0 99 aa3.61□□□□□ -1.83
Ssr1-201ENSMUST00000021864 Prm1P02319 51 aa3.61□□□□□ -1.83
Ssr1-201ENSMUST00000021864 Ryr3A2AGL3 4863 aa3.6□□□□□ -1.83
Ssr1-201ENSMUST00000021864 Pkd1O08852 4293 aa3.6□□□□□ -1.83
Ssr1-201ENSMUST00000021864 Krtap19-9aF8WH65 55 aa3.59□□□□□ -1.83
Ssr1-201ENSMUST00000021864 Dnah3Q8BW94 4083 aa3.58□□□□□ -1.84
Ssr1-201ENSMUST00000021864 Ryr2E9Q401 4966 aaKnown RBP3.58□□□□□ -1.84
Ssr1-201ENSMUST00000021864 Herc2Q4U2R1 4836 aa3.56□□□□□ -1.84
Ssr1-201ENSMUST00000021864 ApobE9Q414 4505 aa3.54□□□□□ -1.84
Ssr1-201ENSMUST00000021864 Dnah9B1AR51 4484 aa3.54□□□□□ -1.84
Ssr1-201ENSMUST00000021864 Csmd3Q80T79 3707 aa3.53□□□□□ -1.84
Ssr1-201ENSMUST00000021864 Dnah1E9Q8T7 4250 aa3.53□□□□□ -1.84
Ssr1-201ENSMUST00000021864 Krtap7-1Q9D3I6 87 aa3.52□□□□□ -1.85
Ssr1-201ENSMUST00000021864 Krtap1-5A2A590 122 aa3.52□□□□□ -1.85
Ssr1-201ENSMUST00000021864 Sprr2gO70558 76 aa3.52□□□□□ -1.85
Ssr1-201ENSMUST00000021864 Dnah11E9Q7N9 4488 aa3.52□□□□□ -1.85
Ssr1-201ENSMUST00000021864 SacsQ9JLC8 4582 aa3.52□□□□□ -1.85
Ssr1-201ENSMUST00000021864 Kiaa1109A2AAE1 5005 aa3.52□□□□□ -1.85
Ssr1-201ENSMUST00000021864 Dnah2P0C6F1 4456 aa3.51□□□□□ -1.85
Ssr1-201ENSMUST00000021864 Mycbp2Q7TPH6 4711 aa3.49□□□□□ -1.85
Ssr1-201ENSMUST00000021864 Dnah6E9Q0B6 4144 aa3.48□□□□□ -1.85
Ssr1-201ENSMUST00000021864 Gm7735D3YX18 52 aa3.48□□□□□ -1.85
Ssr1-201ENSMUST00000021864 Krtap19-9bQ99NG9 58 aa3.48□□□□□ -1.85
Ssr1-201ENSMUST00000021864 Sprr2a3Q4KL71 83 aa3.47□□□□□ -1.85
Ssr1-201ENSMUST00000021864 Sprr2a1Q9CQK8 83 aa3.47□□□□□ -1.85
Ssr1-201ENSMUST00000021864 Dnah7aE9Q0T8 4024 aa3.46□□□□□ -1.86
Ssr1-201ENSMUST00000021864 Dnah7cA0A087WR13 4024 aa3.46□□□□□ -1.86
Ssr1-201ENSMUST00000021864 Dnah7bL7N1Y0 4068 aa3.45□□□□□ -1.86
Ssr1-201ENSMUST00000021864 Fat3Q8BNA6 4555 aa3.45□□□□□ -1.86
Ssr1-201ENSMUST00000021864 Fat1A0A1L1SQU7 4645 aa3.45□□□□□ -1.86
Ssr1-201ENSMUST00000021864 Lrp1bQ9JI18 4599 aa3.44□□□□□ -1.86
Ssr1-201ENSMUST00000021864 Krtap1-4Q3V2D6 188 aa3.43□□□□□ -1.86
Ssr1-201ENSMUST00000021864 Fras1Q80T14 4010 aa3.41□□□□□ -1.86
Ssr1-201ENSMUST00000021864 Dnhd1D3Z2X2 4750 aa3.41□□□□□ -1.86
Ssr1-201ENSMUST00000021864 Birc6O88738 4882 aa3.4□□□□□ -1.87
Ssr1-201ENSMUST00000021864 HydinQ80W93 5154 aa3.39□□□□□ -1.87
Ssr1-201ENSMUST00000021864 Gm9789Q8BIG3 52 aa3.38□□□□□ -1.87
Ssr1-201ENSMUST00000021864 Krtap12-1Q9Z287 130 aa3.38□□□□□ -1.87
Ssr1-201ENSMUST00000021864 Hectd4E9Q2E4 4418 aa3.33□□□□□ -1.88
Ssr1-201ENSMUST00000021864 Krtap19-3Q925H6 87 aa3.32□□□□□ -1.88
Ssr1-201ENSMUST00000021864 Herc1E9PZP8 4859 aa3.32□□□□□ -1.88
Ssr1-201ENSMUST00000021864 Krtap16-3Q8C1I6 86 aa3.3□□□□□ -1.88
Ssr1-201ENSMUST00000021864 Lrp2A2ARV4 4660 aa3.3□□□□□ -1.88
Ssr1-201ENSMUST00000021864 Krtap19-1Q925H2 87 aa3.26□□□□□ -1.89
Ssr1-201ENSMUST00000021864 Lce3bQ9CQM7 98 aa3.26□□□□□ -1.89
Ssr1-201ENSMUST00000021864 4932415D10RikA0A1W2P6U8 4986 aa3.26□□□□□ -1.89
Ssr1-201ENSMUST00000021864 Krtap9-5A2A5X3 358 aa3.25□□□□□ -1.89
Ssr1-201ENSMUST00000021864 Krtap1-3A2A588 173 aa3.24□□□□□ -1.89
Ssr1-201ENSMUST00000021864 Vps13bQ80TY5 3993 aa3.24□□□□□ -1.89
Ssr1-201ENSMUST00000021864 Lrp1Q91ZX7 4545 aaKnown RBP3.23□□□□□ -1.89
Ssr1-201ENSMUST00000021864 PcloQ9QYX7 5068 aa3.2□□□□□ -1.9
Ssr1-201ENSMUST00000021864 2310046K23RikA0A0A6YVW6 87 aa3.19□□□□□ -1.9
Ssr1-201ENSMUST00000021864 Lce3cQ91V05 98 aa3.19□□□□□ -1.9
Ssr1-201ENSMUST00000021864 Gm10061D3Z714 54 aa3.18□□□□□ -1.9
Ssr1-201ENSMUST00000021864 Gm11569B1AQB1 180 aa3.15□□□□□ -1.91
Ssr1-201ENSMUST00000021864 Fat2Q5F226 4351 aa3.14□□□□□ -1.91
Ssr1-201ENSMUST00000021864 Gm10100J3QK64 120 aa3.11□□□□□ -1.91
Ssr1-201ENSMUST00000021864 Krtap4-2B1AQ85 167 aa3.1□□□□□ -1.91
Ssr1-201ENSMUST00000021864 Lce3dE9Q8V1 98 aa3.1□□□□□ -1.91
Ssr1-201ENSMUST00000021864 Sprr2iO70560 76 aa3.1□□□□□ -1.91
Ssr1-201ENSMUST00000021864 Lce3eF8VQJ0 98 aa3.09□□□□□ -1.92
Ssr1-201ENSMUST00000021864 Lce3fQ6PAI4 98 aa3.09□□□□□ -1.92
Ssr1-201ENSMUST00000021864 Krtap19-2Q925I0 141 aa3.09□□□□□ -1.92
Ssr1-201ENSMUST00000021864 Pkhd1E9PZ36 4059 aa3.08□□□□□ -1.92
Ssr1-201ENSMUST00000021864 Gm10272F7CZ33 110 aa3.06□□□□□ -1.92
Ssr1-201ENSMUST00000021864 Abca13Q5SSE9 5034 aa3.05□□□□□ -1.92
Ssr1-201ENSMUST00000021864 Pkhd1l1Q80ZA4 4249 aa3.05□□□□□ -1.92
Ssr1-201ENSMUST00000021864 Gm10142J3KMP7 120 aa3.04□□□□□ -1.92
Ssr1-201ENSMUST00000021864 Mt2P02798 61 aa3.03□□□□□ -1.92
Ssr1-201ENSMUST00000021864 Krtap22-2J3QNX6 67 aa3.03□□□□□ -1.92
Ssr1-201ENSMUST00000021864 Lce1gQ9D195 139 aa3.02□□□□□ -1.93
Ssr1-201ENSMUST00000021864 Kmt2cQ8BRH4 4903 aa3.02□□□□□ -1.93
Ssr1-201ENSMUST00000021864 Sprr2fO70557 76 aa3.02□□□□□ -1.93
Ssr1-201ENSMUST00000021864 Gm38119A0A0A6YX29 146 aa3.01□□□□□ -1.93
Ssr1-201ENSMUST00000021864 Lce3aQ497I5 98 aa3.01□□□□□ -1.93
Ssr1-201ENSMUST00000021864 Fat4Q2PZL6 4981 aa3□□□□□ -1.93
Ssr1-201ENSMUST00000021864 Mdn1A2ANY6 5589 aaKnown RBP2.98□□□□□ -1.93
Ssr1-201ENSMUST00000021864 Ush2AQ2QI47 5193 aa2.96□□□□□ -1.94
Ssr1-201ENSMUST00000021864 ZanO88799 5376 aa2.94□□□□□ -1.94
Ssr1-201ENSMUST00000021864 Krtap4-6Q3V4B7 195 aa2.94□□□□□ -1.94
Ssr1-201ENSMUST00000021864 Ubr4A2AN08 5180 aa2.94□□□□□ -1.94
Ssr1-201ENSMUST00000021864 Lce1jD3YUU5 139 aa2.94□□□□□ -1.94
Ssr1-201ENSMUST00000021864 Gm10024A0A0A0MQA4 119 aa2.9□□□□□ -1.95
Ssr1-201ENSMUST00000021864 Lce1iQ9D6P5 149 aa2.89□□□□□ -1.95
Ssr1-201ENSMUST00000021864 Lce1hQ9D6R3 140 aa2.89□□□□□ -1.95
Ssr1-201ENSMUST00000021864 Gm11596B1AQB0 205 aa2.89□□□□□ -1.95
Ssr1-201ENSMUST00000021864 Rnf213E9Q555 5152 aaKnown RBP2.88□□□□□ -1.95
Ssr1-201ENSMUST00000021864 Mt4P47945 62 aa2.88□□□□□ -1.95
Ssr1-201ENSMUST00000021864 Krtap9-3Q3V2C1 136 aa2.87□□□□□ -1.95
Ssr1-201ENSMUST00000021864 Sprr2eO70556 76 aa2.86□□□□□ -1.95
Ssr1-201ENSMUST00000021864 Lce1bQ9D149 137 aa2.86□□□□□ -1.95
Ssr1-201ENSMUST00000021864 Muc5bE9Q5I3 4800 aa2.86□□□□□ -1.95
Ssr1-201ENSMUST00000021864 Krtap4-1Q3UUY3 169 aa2.85□□□□□ -1.95
Ssr1-201ENSMUST00000021864 Gm11562A0PK51 136 aa2.84□□□□□ -1.95
Ssr1-201ENSMUST00000021864 Lce1fB9EJP6 147 aa2.84□□□□□ -1.95
Ssr1-201ENSMUST00000021864 Lce1cQ9D1C5 147 aa2.84□□□□□ -1.95
Ssr1-201ENSMUST00000021864 Lce1lQ9D1G7 135 aa2.84□□□□□ -1.95
Ssr1-201ENSMUST00000021864 Lce1dQ9D731 133 aa2.84□□□□□ -1.95
Retrieved 100 of 22,080 RNA–protein pairs in 157.9 ms