RNA–Protein interactions for RNA: ENSMUST00000021288.9

Usp43-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp43, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43-201ENSMUST00000021288 Lrp1Q91ZX7 4545 aaKnown RBP7.08□□□□□ -1.28
Usp43-201ENSMUST00000021288 Dync2h1Q45VK7 4306 aa7.08□□□□□ -1.28
Usp43-201ENSMUST00000021288 Dnah6E9Q0B6 4144 aa7.08□□□□□ -1.28
Usp43-201ENSMUST00000021288 Dync1h1Q9JHU4 4644 aaKnown RBP7.07□□□□□ -1.28
Usp43-201ENSMUST00000021288 Fat3Q8BNA6 4555 aa7.06□□□□□ -1.28
Usp43-201ENSMUST00000021288 SacsQ9JLC8 4582 aa7.04□□□□□ -1.28
Usp43-201ENSMUST00000021288 Dnah1E9Q8T7 4250 aa7.02□□□□□ -1.29
Usp43-201ENSMUST00000021288 Hectd4E9Q2E4 4418 aa7□□□□□ -1.29
Usp43-201ENSMUST00000021288 Prm2P07978 107 aa6.99□□□□□ -1.29
Usp43-201ENSMUST00000021288 Dnah3Q8BW94 4083 aa6.97□□□□□ -1.29
Usp43-201ENSMUST00000021288 Gm19668J3QMD1 248 aa6.96□□□□□ -1.3
Usp43-201ENSMUST00000021288 Kiaa1109A2AAE1 5005 aa6.92□□□□□ -1.3
Usp43-201ENSMUST00000021288 Fras1Q80T14 4010 aa6.9□□□□□ -1.31
Usp43-201ENSMUST00000021288 Lrp2A2ARV4 4660 aa6.85□□□□□ -1.31
Usp43-201ENSMUST00000021288 Dnah7cA0A087WR13 4024 aa6.84□□□□□ -1.31
Usp43-201ENSMUST00000021288 Fat1A0A1L1SQU7 4645 aa6.83□□□□□ -1.32
Usp43-201ENSMUST00000021288 Vps13bQ80TY5 3993 aa6.82□□□□□ -1.32
Usp43-201ENSMUST00000021288 Herc2Q4U2R1 4836 aa6.78□□□□□ -1.32
Usp43-201ENSMUST00000021288 Krtap1-5A2A590 122 aa6.77□□□□□ -1.33
Usp43-201ENSMUST00000021288 Gm19402J3QJV4 266 aa6.77□□□□□ -1.33
Usp43-201ENSMUST00000021288 Dnah7aE9Q0T8 4024 aa6.75□□□□□ -1.33
Usp43-201ENSMUST00000021288 LorP18165 486 aa6.75□□□□□ -1.33
Usp43-201ENSMUST00000021288 Sprr2a3Q4KL71 83 aa6.67□□□□□ -1.34
Usp43-201ENSMUST00000021288 Sprr2a1Q9CQK8 83 aa6.67□□□□□ -1.34
Usp43-201ENSMUST00000021288 Krtap7-1Q9D3I6 87 aa6.61□□□□□ -1.35
Usp43-201ENSMUST00000021288 Gm18596A0A1W2P860 280 aa6.61□□□□□ -1.35
Usp43-201ENSMUST00000021288 Krtap1-4Q3V2D6 188 aa6.6□□□□□ -1.35
Usp43-201ENSMUST00000021288 Dnah8Q91XQ0 4731 aa6.59□□□□□ -1.35
Usp43-201ENSMUST00000021288 Pkd1O08852 4293 aa6.49□□□□□ -1.37
Usp43-201ENSMUST00000021288 Fat2Q5F226 4351 aa6.49□□□□□ -1.37
Usp43-201ENSMUST00000021288 Krtap19-9aF8WH65 55 aa6.48□□□□□ -1.37
Usp43-201ENSMUST00000021288 Krtap16-3Q8C1I6 86 aa6.44□□□□□ -1.38
Usp43-201ENSMUST00000021288 Abca13Q5SSE9 5034 aa6.42□□□□□ -1.38
Usp43-201ENSMUST00000021288 Ryr2E9Q401 4966 aaKnown RBP6.41□□□□□ -1.38
Usp43-201ENSMUST00000021288 Kmt2cQ8BRH4 4903 aa6.41□□□□□ -1.38
Usp43-201ENSMUST00000021288 Krtap12-1Q9Z287 130 aa6.41□□□□□ -1.38
Usp43-201ENSMUST00000021288 Krtap19-3Q925H6 87 aa6.37□□□□□ -1.39
Usp43-201ENSMUST00000021288 Krtap19-1Q925H2 87 aa6.29□□□□□ -1.4
Usp43-201ENSMUST00000021288 Lce1mQ9CR91 182 aa6.28□□□□□ -1.4
Usp43-201ENSMUST00000021288 Dnhd1D3Z2X2 4750 aa6.27□□□□□ -1.41
Usp43-201ENSMUST00000021288 Gm6358A0A087WPH4 74 aa6.27□□□□□ -1.41
Usp43-201ENSMUST00000021288 PcloQ9QYX7 5068 aa6.27□□□□□ -1.41
Usp43-201ENSMUST00000021288 Krtap19-9bQ99NG9 58 aa6.18□□□□□ -1.42
Usp43-201ENSMUST00000021288 4933428G20RikQ9D3X4 101 aa6.16□□□□□ -1.42
Usp43-201ENSMUST00000021288 Pkhd1l1Q80ZA4 4249 aa6.14□□□□□ -1.43
Usp43-201ENSMUST00000021288 Mdn1A2ANY6 5589 aaKnown RBP6.08□□□□□ -1.44
Usp43-201ENSMUST00000021288 Krtap9-5A2A5X3 358 aa6.08□□□□□ -1.44
Usp43-201ENSMUST00000021288 Krtap8-1O08633 61 aa6.08□□□□□ -1.44
Usp43-201ENSMUST00000021288 Pkhd1E9PZ36 4059 aa6.06□□□□□ -1.44
Usp43-201ENSMUST00000021288 Ubr4A2AN08 5180 aa6.03□□□□□ -1.44
Usp43-201ENSMUST00000021288 Birc6O88738 4882 aa6.02□□□□□ -1.45
Usp43-201ENSMUST00000021288 Lce1jD3YUU5 139 aa6.01□□□□□ -1.45
Usp43-201ENSMUST00000021288 Herc1E9PZP8 4859 aa5.98□□□□□ -1.45
Usp43-201ENSMUST00000021288 Krtap1-3A2A588 173 aa5.98□□□□□ -1.45
Usp43-201ENSMUST00000021288 Prm1P02319 51 aa5.83□□□□□ -1.48
Usp43-201ENSMUST00000021288 Krtap19-2Q925I0 141 aa5.81□□□□□ -1.48
Usp43-201ENSMUST00000021288 4932415D10RikA0A1W2P6U8 4986 aa5.8□□□□□ -1.48
Usp43-201ENSMUST00000021288 Gm7735D3YX18 52 aa5.79□□□□□ -1.48
Usp43-201ENSMUST00000021288 Fat4Q2PZL6 4981 aa5.75□□□□□ -1.49
Usp43-201ENSMUST00000021288 Mt2P02798 61 aa5.75□□□□□ -1.49
Usp43-201ENSMUST00000021288 ZanO88799 5376 aa5.72□□□□□ -1.49
Usp43-201ENSMUST00000021288 Sprr2kO70562 68 aa5.71□□□□□ -1.5
Usp43-201ENSMUST00000021288 Rnf213E9Q555 5152 aaKnown RBP5.7□□□□□ -1.5
Usp43-201ENSMUST00000021288 Gm9789Q8BIG3 52 aa5.7□□□□□ -1.5
Usp43-201ENSMUST00000021288 Syne1Q6ZWR6 8799 aa5.7□□□□□ -1.5
Usp43-201ENSMUST00000021288 Gm10272F7CZ33 110 aa5.65□□□□□ -1.51
Usp43-201ENSMUST00000021288 Ush2AQ2QI47 5193 aa5.64□□□□□ -1.51
Usp43-201ENSMUST00000021288 Hmcn2A2AJ76 5100 aa5.63□□□□□ -1.51
Usp43-201ENSMUST00000021288 Krtap17-1A2A5X6 109 aa5.57□□□□□ -1.52
Usp43-201ENSMUST00000021288 Krtap22-2J3QNX6 67 aa5.56□□□□□ -1.52
Usp43-201ENSMUST00000021288 2310046K23RikA0A0A6YVW6 87 aa5.53□□□□□ -1.52
Usp43-201ENSMUST00000021288 Gm10061D3Z714 54 aa5.51□□□□□ -1.53
Usp43-201ENSMUST00000021288 Lce1iQ9D6P5 149 aa5.5□□□□□ -1.53
Usp43-201ENSMUST00000021288 Gm10100J3QK64 120 aa5.44□□□□□ -1.54
Usp43-201ENSMUST00000021288 Lce1a2Q9D1K4 149 aa5.44□□□□□ -1.54
Usp43-201ENSMUST00000021288 Lce3bQ9CQM7 98 aa5.42□□□□□ -1.54
Usp43-201ENSMUST00000021288 Muc16A0A140LJ72 8478 aa5.39□□□□□ -1.55
Usp43-201ENSMUST00000021288 Gm38119A0A0A6YX29 146 aa5.36□□□□□ -1.55
Usp43-201ENSMUST00000021288 Lce3cQ91V05 98 aa5.36□□□□□ -1.55
Usp43-201ENSMUST00000021288 Gm11569B1AQB1 180 aa5.33□□□□□ -1.56
Usp43-201ENSMUST00000021288 Krtap9-3Q3V2C1 136 aa5.29□□□□□ -1.56
Usp43-201ENSMUST00000021288 Sprr2gO70558 76 aa5.25□□□□□ -1.57
Usp43-201ENSMUST00000021288 Gm10142J3KMP7 120 aa5.23□□□□□ -1.57
Usp43-201ENSMUST00000021288 Lce3eF8VQJ0 98 aa5.23□□□□□ -1.57
Usp43-201ENSMUST00000021288 Lce3fQ6PAI4 98 aa5.23□□□□□ -1.57
Usp43-201ENSMUST00000021288 Lce1hQ9D6R3 140 aa5.21□□□□□ -1.58
Usp43-201ENSMUST00000021288 Fsip2A2ARZ3 6995 aa5.15□□□□□ -1.58
Usp43-201ENSMUST00000021288 Krtap4-6Q3V4B7 195 aa5.07□□□□□ -1.6
Usp43-201ENSMUST00000021288 Lce3dE9Q8V1 98 aa5.06□□□□□ -1.6
Usp43-201ENSMUST00000021288 Lce1gQ9D195 139 aa5.03□□□□□ -1.6
Usp43-201ENSMUST00000021288 Lce3aQ497I5 98 aa5.02□□□□□ -1.61
Usp43-201ENSMUST00000021288 Mt4P47945 62 aa5.01□□□□□ -1.61
Usp43-201ENSMUST00000021288 Lce1bQ9D149 137 aa4.98□□□□□ -1.61
Usp43-201ENSMUST00000021288 Lce1fB9EJP6 147 aa4.96□□□□□ -1.62
Usp43-201ENSMUST00000021288 Lce1cQ9D1C5 147 aa4.96□□□□□ -1.62
Usp43-201ENSMUST00000021288 Lce1lQ9D1G7 135 aa4.96□□□□□ -1.62
Usp43-201ENSMUST00000021288 Lce1dQ9D731 133 aa4.96□□□□□ -1.62
Usp43-201ENSMUST00000021288 Sprr2iO70560 76 aa4.92□□□□□ -1.62
Usp43-201ENSMUST00000021288 Krtap4-2B1AQ85 167 aa4.92□□□□□ -1.62
Usp43-201ENSMUST00000021288 Muc5bE9Q5I3 4800 aa4.88□□□□□ -1.63
Retrieved 100 of 22,080 RNA–protein pairs in 1103.7 ms