RNA–Protein interactions for RNA: ENSMUST00000021043.4

Ccl1-201, Transcript of C-C motif chemokine 1, mousemouse

TSL 1 (best) BASIC

Gene Ccl1, Length 611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1-201ENSMUST00000021043 Krtap9-5A2A5X3 358 aa5.57□□□□□ -1.52
Ccl1-201ENSMUST00000021043 Defb1P56386 69 aa5.57□□□□□ -1.52
Ccl1-201ENSMUST00000021043 Krtap19-2Q925I0 141 aa5.56□□□□□ -1.52
Ccl1-201ENSMUST00000021043 Gm11555B1AQ89 175 aa5.55□□□□□ -1.52
Ccl1-201ENSMUST00000021043 4930518I15RikQ3V2W7 57 aa5.55□□□□□ -1.52
Ccl1-201ENSMUST00000021043 Lce1jD3YUU5 139 aa5.53□□□□□ -1.52
Ccl1-201ENSMUST00000021043 Gm11563B1AQ90 168 aa5.52□□□□□ -1.53
Ccl1-201ENSMUST00000021043 Atp5eP56382 52 aa5.52□□□□□ -1.53
Ccl1-201ENSMUST00000021043 Coa6Q8BGD8 79 aa5.52□□□□□ -1.53
Ccl1-201ENSMUST00000021043 Krtap4-7Q9D732 168 aa5.52□□□□□ -1.53
Ccl1-201ENSMUST00000021043 A0A1Y7VLE6 161 aa5.51□□□□□ -1.53
Ccl1-201ENSMUST00000021043 Gm11596B1AQB0 205 aa5.51□□□□□ -1.53
Ccl1-201ENSMUST00000021043 Krtap12-1Q9Z287 130 aa5.5□□□□□ -1.53
Ccl1-201ENSMUST00000021043 B230307C23RikQ8BLB2 64 aa5.48□□□□□ -1.53
Ccl1-201ENSMUST00000021043 Cox6b2Q80ZN9 88 aa5.47□□□□□ -1.53
Ccl1-201ENSMUST00000021043 Muc5bE9Q5I3 4800 aa5.47□□□□□ -1.53
Ccl1-201ENSMUST00000021043 Krtap28-13A0A087WQP5 138 aa5.46□□□□□ -1.54
Ccl1-201ENSMUST00000021043 Gm17606F6ZL36 78 aa5.46□□□□□ -1.54
Ccl1-201ENSMUST00000021043 Serp2Q6TAW2 65 aa5.46□□□□□ -1.54
Ccl1-201ENSMUST00000021043 Syne2Q6ZWQ0 6874 aaKnown RBP5.45□□□□□ -1.54
Ccl1-201ENSMUST00000021043 Krtap4-6Q3V4B7 195 aa5.45□□□□□ -1.54
Ccl1-201ENSMUST00000021043 Gm10643Q3URG9 111 aa5.44□□□□□ -1.54
Ccl1-201ENSMUST00000021043 Pla2g10Q9QXX3 151 aa5.43□□□□□ -1.54
Ccl1-201ENSMUST00000021043 BC029722A0A0N4SW31 51 aa5.41□□□□□ -1.54
Ccl1-201ENSMUST00000021043 SptssbQ925E8 76 aa5.39□□□□□ -1.55
Ccl1-201ENSMUST00000021043 Prm2P07978 107 aa5.38□□□□□ -1.55
Ccl1-201ENSMUST00000021043 Krtap19-9aF8WH65 55 aa5.37□□□□□ -1.55
Ccl1-201ENSMUST00000021043 A030005K14RikA0A1Y7VNY1 122 aa5.36□□□□□ -1.55
Ccl1-201ENSMUST00000021043 Anapc13Q8R034 74 aa5.36□□□□□ -1.55
Ccl1-201ENSMUST00000021043 Gm20537G3UYK7 97 aa5.35□□□□□ -1.55
Ccl1-201ENSMUST00000021043 Gm10382Q3V0T5 144 aa5.35□□□□□ -1.55
Ccl1-201ENSMUST00000021043 Coa5Q99M07 74 aa5.34□□□□□ -1.55
Ccl1-201ENSMUST00000021043 Gm6358A0A087WPH4 74 aa5.32□□□□□ -1.56
Ccl1-201ENSMUST00000021043 CriptO70333 101 aa5.3□□□□□ -1.56
Ccl1-201ENSMUST00000021043 Spink7Q6IE32 76 aa5.3□□□□□ -1.56
Ccl1-201ENSMUST00000021043 Mdn1A2ANY6 5589 aaKnown RBP5.28□□□□□ -1.56
Ccl1-201ENSMUST00000021043 Gm11564A2A4L9 201 aa5.24□□□□□ -1.57
Ccl1-201ENSMUST00000021043 Gm11595B1AQA7 289 aa5.24□□□□□ -1.57
Ccl1-201ENSMUST00000021043 Krtap4-8B1AQA8 209 aa5.24□□□□□ -1.57
Ccl1-201ENSMUST00000021043 Limd2Q8BGB5 128 aa5.22□□□□□ -1.57
Ccl1-201ENSMUST00000021043 Smim20D3Z7Q2 69 aa5.18□□□□□ -1.58
Ccl1-201ENSMUST00000021043 Gm20661K7N787 53 aa5.18□□□□□ -1.58
Ccl1-201ENSMUST00000021043 Lce1iQ9D6P5 149 aa5.18□□□□□ -1.58
Ccl1-201ENSMUST00000021043 Sox16Q62247 57 aa5.17□□□□□ -1.58
Ccl1-201ENSMUST00000021043 Smlr1J3QMJ4 66 aa5.13□□□□□ -1.59
Ccl1-201ENSMUST00000021043 SvipQ3UZP4 77 aa5.13□□□□□ -1.59
Ccl1-201ENSMUST00000021043 SnurfQ9WU12 71 aa5.1□□□□□ -1.59
Ccl1-201ENSMUST00000021043 Lce1a2Q9D1K4 149 aa5.09□□□□□ -1.59
Ccl1-201ENSMUST00000021043 A030005L19RikA0A1Y7VIU2 113 aa5.08□□□□□ -1.6
Ccl1-201ENSMUST00000021043 Krtap4-9B1AQA9 244 aa5.08□□□□□ -1.6
Ccl1-201ENSMUST00000021043 Mt2P02798 61 aa5.06□□□□□ -1.6
Ccl1-201ENSMUST00000021043 Pet100P0DJE0 76 aa5.06□□□□□ -1.6
Ccl1-201ENSMUST00000021043 H2al1aQ5M8Q2 105 aa5.06□□□□□ -1.6
Ccl1-201ENSMUST00000021043 H2al1eQ810S6 105 aa5.06□□□□□ -1.6
Ccl1-201ENSMUST00000021043 Sec61gP60060 68 aa5.02□□□□□ -1.61
Ccl1-201ENSMUST00000021043 Serp1Q9Z1W5 66 aa5.02□□□□□ -1.61
Ccl1-201ENSMUST00000021043 Mt4P47945 62 aa5.01□□□□□ -1.61
Ccl1-201ENSMUST00000021043 Cdc42se1Q8BHL7 80 aa5.01□□□□□ -1.61
Ccl1-201ENSMUST00000021043 Sprr2a3Q4KL71 83 aa4.99□□□□□ -1.61
Ccl1-201ENSMUST00000021043 Sprr2a1Q9CQK8 83 aa4.99□□□□□ -1.61
Ccl1-201ENSMUST00000021043 Krtap8-1O08633 61 aa4.97□□□□□ -1.61
Ccl1-201ENSMUST00000021043 Tmem258P61166 79 aa4.96□□□□□ -1.62
Ccl1-201ENSMUST00000021043 Gm9955Q8CEJ8 102 aa4.96□□□□□ -1.62
Ccl1-201ENSMUST00000021043 Uqcr11Q9CPX8 56 aa4.96□□□□□ -1.62
Ccl1-201ENSMUST00000021043 Krtap9-3Q3V2C1 136 aa4.95□□□□□ -1.62
Ccl1-201ENSMUST00000021043 H2al1bA0A087WP11 105 aa4.93□□□□□ -1.62
Ccl1-201ENSMUST00000021043 Gm7544A0A1Y7VJ58 118 aa4.92□□□□□ -1.62
Ccl1-201ENSMUST00000021043 Gm17402F6Z0L5 76 aa4.92□□□□□ -1.62
Ccl1-201ENSMUST00000021043 Phxr4P15974 95 aa4.92□□□□□ -1.62
Ccl1-201ENSMUST00000021043 Gm19935A0A1B0GSF9 52 aa4.89□□□□□ -1.63
Ccl1-201ENSMUST00000021043 Krtap4-13Q9D7P3 165 aa4.89□□□□□ -1.63
Ccl1-201ENSMUST00000021043 A0A1Y7VJ07 166 aa4.88□□□□□ -1.63
Ccl1-201ENSMUST00000021043 Krtap31-2Q8CAY5 177 aa4.85□□□□□ -1.63
Ccl1-201ENSMUST00000021043 Gm19668J3QMD1 248 aa4.83□□□□□ -1.64
Ccl1-201ENSMUST00000021043 Krtap6-3A0A087WQL6 57 aa4.82□□□□□ -1.64
Ccl1-201ENSMUST00000021043 Lce1bQ9D149 137 aa4.82□□□□□ -1.64
Ccl1-201ENSMUST00000021043 Krtap22-2J3QNX6 67 aa4.81□□□□□ -1.64
Ccl1-201ENSMUST00000021043 Ndufb1P0DN34 57 aa4.81□□□□□ -1.64
Ccl1-201ENSMUST00000021043 Brk1Q91VR8 75 aa4.81□□□□□ -1.64
Ccl1-201ENSMUST00000021043 Fsip2A2ARZ3 6995 aa4.81□□□□□ -1.64
Ccl1-201ENSMUST00000021043 Sprr2kO70562 68 aa4.8□□□□□ -1.64
Ccl1-201ENSMUST00000021043 Gm38119A0A0A6YX29 146 aa4.75□□□□□ -1.65
Ccl1-201ENSMUST00000021043 2300003K06RikA2A4M0 262 aa4.73□□□□□ -1.65
Ccl1-201ENSMUST00000021043 A030014E15RikA0A1Y7VJV2 120 aa4.71□□□□□ -1.66
Ccl1-201ENSMUST00000021043 Lce1lQ9D1G7 135 aa4.69□□□□□ -1.66
Ccl1-201ENSMUST00000021043 Pcp4P63054 62 aa4.68□□□□□ -1.66
Ccl1-201ENSMUST00000021043 Krtap31-1Q9D644 177 aa4.66□□□□□ -1.66
Ccl1-201ENSMUST00000021043 SmcpP15265 143 aa4.64□□□□□ -1.67
Ccl1-201ENSMUST00000021043 Krtap19-9bQ99NG9 58 aa4.63□□□□□ -1.67
Ccl1-201ENSMUST00000021043 Camk2n1Q6QWF9 78 aa4.62□□□□□ -1.67
Ccl1-201ENSMUST00000021043 Rps28P62858 69 aaKnown RBP4.56□□□□□ -1.68
Ccl1-201ENSMUST00000021043 Gm3880A0A1B0GSB3 72 aa4.52□□□□□ -1.69
Ccl1-201ENSMUST00000021043 H2al1kJ3QP08 105 aa4.5□□□□□ -1.69
Ccl1-201ENSMUST00000021043 Sprr2gO70558 76 aa4.47□□□□□ -1.69
Ccl1-201ENSMUST00000021043 Lce1hQ9D6R3 140 aa4.47□□□□□ -1.69
Ccl1-201ENSMUST00000021043 H2al1mQ9DAD9 105 aa4.45□□□□□ -1.7
Ccl1-201ENSMUST00000021043 Lce1a1Q9CQH5 143 aa4.43□□□□□ -1.7
Ccl1-201ENSMUST00000021043 A030003K21RikA0A1Y7VIM3 128 aa4.4□□□□□ -1.71
Ccl1-201ENSMUST00000021043 Krtap20-2E9Q0A8 60 aa4.39□□□□□ -1.71
Ccl1-201ENSMUST00000021043 Lce1dQ9D731 133 aa4.34□□□□□ -1.71
Retrieved 100 of 22,080 RNA–protein pairs in 138.6 ms