RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeast

Gene SNF8, Length 702 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF8	YPL002C	CSE2	P33308	149 aa		4.56	□□□□□ -1.68
SNF8	YPL002C	SET3	P36124	751 aa		4.56	□□□□□ -1.68
SNF8	YPL002C	RXT2	P38255	430 aa		4.56	□□□□□ -1.68
SNF8	YPL002C	YIR016W	P40572	265 aa		4.56	□□□□□ -1.68
SNF8	YPL002C	OSW7	P43611	510 aa		4.56	□□□□□ -1.68
SNF8	YPL002C	ATG36	P46983	293 aa		4.56	□□□□□ -1.68
SNF8	YPL002C	ASE1	P50275	885 aa		4.56	□□□□□ -1.68
SNF8	YPL002C	UBC9	P50623	157 aa	Predicted RBP	4.56	□□□□□ -1.68
SNF8	YPL002C	TFC6	Q06339	672 aa		4.56	□□□□□ -1.68
SNF8	YPL002C	SMC5	Q08204	1093 aa		4.56	□□□□□ -1.68
SNF8	YPL002C	ZRT2	Q12436	422 aa		4.56	□□□□□ -1.68
SNF8	YPL002C	CSF1	Q12150	2958 aa		4.55	□□□□□ -1.68
SNF8	YPL002C	PEX1	P24004	1043 aa		4.55	□□□□□ -1.68
SNF8	YPL002C	SGF29	P25554	259 aa		4.55	□□□□□ -1.68
SNF8	YPL002C	STO1	P34160	861 aa	Known RBP	4.55	□□□□□ -1.68
SNF8	YPL002C	COY1	P34237	679 aa		4.55	□□□□□ -1.68
SNF8	YPL002C	CCL1	P37366	393 aa		4.55	□□□□□ -1.68
SNF8	YPL002C	RPN10	P38886	268 aa	Known RBP	4.55	□□□□□ -1.68
SNF8	YPL002C	EAF5	P39995	279 aa		4.55	□□□□□ -1.68
SNF8	YPL002C	LAM5	P43560	674 aa		4.55	□□□□□ -1.68
SNF8	YPL002C	YDR341C	Q05506	607 aa	Known RBP	4.55	□□□□□ -1.68
SNF8	YPL002C	FPR4	Q06205	392 aa	Predicted RBP	4.55	□□□□□ -1.68
SNF8	YPL002C	CDC16	P09798	840 aa		4.54	□□□□□ -1.68
SNF8	YPL002C	HMG2	P12684	1045 aa		4.54	□□□□□ -1.68
SNF8	YPL002C	RNR3	P21672	869 aa	Known RBP	4.54	□□□□□ -1.68
SNF8	YPL002C	CCR4	P31384	837 aa	Known RBP	4.54	□□□□□ -1.68
SNF8	YPL002C	CRP1	P38845	465 aa	Known RBP	4.54	□□□□□ -1.68
SNF8	YPL002C	GID8	P40208	455 aa		4.54	□□□□□ -1.68
SNF8	YPL002C	VID28	P40547	921 aa		4.54	□□□□□ -1.68
SNF8	YPL002C	CAF16	P43569	289 aa		4.54	□□□□□ -1.68
SNF8	YPL002C	RTS3	P53289	263 aa		4.54	□□□□□ -1.68
SNF8	YPL002C	DOS2	P54858	310 aa		4.54	□□□□□ -1.68
SNF8	YPL002C	SNP1	Q00916	300 aa	Predicted RBP	4.54	□□□□□ -1.68
SNF8	YPL002C	LEE1	Q02799	301 aa	Known RBP	4.54	□□□□□ -1.68
SNF8	YPL002C	CSM3	Q04659	317 aa		4.54	□□□□□ -1.68
SNF8	YPL002C	YML053C	Q04978	212 aa		4.54	□□□□□ -1.68
SNF8	YPL002C	NSE1	Q07913	336 aa		4.54	□□□□□ -1.68
SNF8	YPL002C	SDH5	Q08230	162 aa		4.54	□□□□□ -1.68
SNF8	YPL002C	RIM20	Q12033	661 aa		4.54	□□□□□ -1.68
SNF8	YPL002C	PKH2	Q12236	1081 aa	Known RBP	4.54	□□□□□ -1.68
SNF8	YPL002C	MDM12	Q92328	271 aa		4.54	□□□□□ -1.68
SNF8	YPL002C	YOR111W	Q99210	232 aa		4.54	□□□□□ -1.68
SNF8	YPL002C	LAA1	P39526	2014 aa		4.54	□□□□□ -1.68
SNF8	YPL002C	VAS1	P07806	1104 aa	Known RBP	4.53	□□□□□ -1.68
SNF8	YPL002C	HOM2	P13663	365 aa	Known RBP	4.53	□□□□□ -1.68
SNF8	YPL002C	KGD2	P19262	463 aa	Predicted RBP	4.53	□□□□□ -1.68
SNF8	YPL002C	MEF1	P25039	761 aa		4.53	□□□□□ -1.68
SNF8	YPL002C	SAS3	P34218	831 aa		4.53	□□□□□ -1.68
SNF8	YPL002C	GCS1	P35197	352 aa		4.53	□□□□□ -1.68
SNF8	YPL002C	UBP11	P36026	717 aa		4.53	□□□□□ -1.68
SNF8	YPL002C	RIM4	P38741	713 aa		4.53	□□□□□ -1.68
SNF8	YPL002C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
SNF8	YPL002C	PAC2	P39937	518 aa		4.53	□□□□□ -1.68
SNF8	YPL002C	YNL195C	P40168	261 aa		4.53	□□□□□ -1.68
SNF8	YPL002C	NOP9	P47077	666 aa	Known RBP	4.53	□□□□□ -1.68
SNF8	YPL002C	BNI5	P53890	448 aa	Known RBP	4.53	□□□□□ -1.68
SNF8	YPL002C	ARP4	P80428	489 aa		4.53	□□□□□ -1.68
SNF8	YPL002C	REC102	Q02721	264 aa		4.53	□□□□□ -1.68
SNF8	YPL002C	SMD2	Q06217	110 aa	Known RBP	4.53	□□□□□ -1.68
SNF8	YPL002C	ECM3	Q99252	613 aa		4.53	□□□□□ -1.68
SNF8	YPL002C	MEX67	Q99257	599 aa	Known RBP	4.53	□□□□□ -1.68
SNF8	YPL002C	RAD50	P12753	1312 aa		4.52	□□□□□ -1.69
SNF8	YPL002C	ATP1	P07251	545 aa	Known RBP	4.52	□□□□□ -1.69
SNF8	YPL002C	BRN1	P38170	754 aa		4.52	□□□□□ -1.69
SNF8	YPL002C	PCM1	P38628	557 aa	Known RBP	4.52	□□□□□ -1.69
SNF8	YPL002C	MUP3	P38734	546 aa		4.52	□□□□□ -1.69
SNF8	YPL002C	TAM41	P53230	385 aa		4.52	□□□□□ -1.69
SNF8	YPL002C	NSE5	Q03718	556 aa		4.52	□□□□□ -1.69
SNF8	YPL002C	YAP7	Q08182	245 aa		4.52	□□□□□ -1.69
SNF8	YPL002C	OSW1	Q08692	278 aa		4.52	□□□□□ -1.69
SNF8	YPL002C	ICT1	Q12385	394 aa		4.52	□□□□□ -1.69
SNF8	YPL002C	MAS1	P10507	462 aa		4.51	□□□□□ -1.69
SNF8	YPL002C	CLN3	P13365	580 aa		4.51	□□□□□ -1.69
SNF8	YPL002C	VPS34	P22543	875 aa		4.51	□□□□□ -1.69
SNF8	YPL002C	RSA4	P25382	515 aa	Known RBP	4.51	□□□□□ -1.69
SNF8	YPL002C	PEX34	P25584	144 aa		4.51	□□□□□ -1.69
SNF8	YPL002C	VBA3	P25594	458 aa		4.51	□□□□□ -1.69
SNF8	YPL002C	PEP3	P27801	918 aa		4.51	□□□□□ -1.69
SNF8	YPL002C	ORC2	P32833	620 aa		4.51	□□□□□ -1.69
SNF8	YPL002C	RPS0A	P32905	252 aa	Known RBP	4.51	□□□□□ -1.69
SNF8	YPL002C	PCL10	P53124	433 aa		4.51	□□□□□ -1.69
SNF8	YPL002C	COX18	P53239	316 aa		4.51	□□□□□ -1.69
SNF8	YPL002C	NHX1	Q04121	633 aa		4.51	□□□□□ -1.69
SNF8	YPL002C	COQ9	Q05779	260 aa		4.51	□□□□□ -1.69
SNF8	YPL002C	ILV1	P00927	576 aa	Known RBP	4.5	□□□□□ -1.69
SNF8	YPL002C	ADE4	P04046	510 aa	Known RBP	4.5	□□□□□ -1.69
SNF8	YPL002C	RPS14A	P06367	137 aa	Known RBP	4.5	□□□□□ -1.69
SNF8	YPL002C	HAP2	P06774	265 aa		4.5	□□□□□ -1.69
SNF8	YPL002C	MCM3	P24279	971 aa	Known RBP	4.5	□□□□□ -1.69
SNF8	YPL002C	VPH1	P32563	840 aa	Known RBP	4.5	□□□□□ -1.69
SNF8	YPL002C	TMT1	P32643	299 aa		4.5	□□□□□ -1.69
SNF8	YPL002C	GMH1	P36125	273 aa		4.5	□□□□□ -1.69
SNF8	YPL002C	HSL7	P38274	827 aa		4.5	□□□□□ -1.69
SNF8	YPL002C	RPS14B	P39516	138 aa	Known RBP	4.5	□□□□□ -1.69
SNF8	YPL002C	GPD2	P41911	440 aa	Known RBP	4.5	□□□□□ -1.69
SNF8	YPL002C	NNF1	P47149	201 aa		4.5	□□□□□ -1.69
SNF8	YPL002C	MRK1	P50873	501 aa		4.5	□□□□□ -1.69
SNF8	YPL002C	AIM33	Q04516	312 aa		4.5	□□□□□ -1.69
SNF8	YPL002C	NKP2	Q06162	153 aa		4.5	□□□□□ -1.69
SNF8	YPL002C	DNL4	Q08387	944 aa	Predicted RBP	4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms