RNA–Protein interactions for RNA: YOR239W

ABP140, Transcript of AdoMet-dependent tRNA methyltransferase and actin binding protein, yeastyeast

Gene ABP140, Length 1,887 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP140YOR239W IMD2P38697 523 aaKnown RBP3.82□□□□□ -1.8
ABP140YOR239W SBE22P38814 852 aa3.82□□□□□ -1.8
ABP140YOR239W APE4P38821 490 aa3.82□□□□□ -1.8
ABP140YOR239W SET5P38890 526 aaKnown RBP3.82□□□□□ -1.8
ABP140YOR239W FMP10P40098 244 aa3.82□□□□□ -1.8
ABP140YOR239W TED1P40533 473 aa3.82□□□□□ -1.8
ABP140YOR239W CST6P40535 587 aa3.82□□□□□ -1.8
ABP140YOR239W IRC6P43615 237 aa3.82□□□□□ -1.8
ABP140YOR239W AIP1P46680 615 aaKnown RBP3.82□□□□□ -1.8
ABP140YOR239W LSM1P47017 172 aaKnown RBP3.82□□□□□ -1.8
ABP140YOR239W RSM26P47141 266 aa3.82□□□□□ -1.8
ABP140YOR239W MLC1P53141 149 aa3.82□□□□□ -1.8
ABP140YOR239W DBP6P53734 629 aaKnown RBP3.82□□□□□ -1.8
ABP140YOR239W ASI2P53895 289 aa3.82□□□□□ -1.8
ABP140YOR239W MPS1P54199 764 aa3.82□□□□□ -1.8
ABP140YOR239W ALO1P54783 526 aaKnown RBP3.82□□□□□ -1.8
ABP140YOR239W DID2P69771 204 aa3.82□□□□□ -1.8
ABP140YOR239W RMI1Q02685 241 aa3.82□□□□□ -1.8
ABP140YOR239W MUK1Q02866 612 aa3.82□□□□□ -1.8
ABP140YOR239W YMR010WQ03687 405 aa3.82□□□□□ -1.8
ABP140YOR239W TAF11Q04226 346 aa3.82□□□□□ -1.8
ABP140YOR239W SPO20Q04359 397 aa3.82□□□□□ -1.8
ABP140YOR239W PEX10Q05568 337 aa3.82□□□□□ -1.8
ABP140YOR239W COQ9Q05779 260 aa3.82□□□□□ -1.8
ABP140YOR239W YDL121CQ07541 149 aa3.82□□□□□ -1.8
ABP140YOR239W YAP7Q08182 245 aa3.82□□□□□ -1.8
ABP140YOR239W MCD1Q12158 566 aa3.82□□□□□ -1.8
ABP140YOR239W ATG11Q12527 1178 aa3.82□□□□□ -1.8
ABP140YOR239W YBR298C-AQ8TGK4 73 aa3.82□□□□□ -1.8
ABP140YOR239W COR1P07256 457 aa3.81□□□□□ -1.8
ABP140YOR239W TUB1P09733 447 aaKnown RBP3.81□□□□□ -1.8
ABP140YOR239W NCP1P16603 691 aaKnown RBP3.81□□□□□ -1.8
ABP140YOR239W SFL1P20134 766 aa3.81□□□□□ -1.8
ABP140YOR239W CBP3P21560 335 aa3.81□□□□□ -1.8
ABP140YOR239W RAD27P26793 382 aa3.81□□□□□ -1.8
ABP140YOR239W PMT2P31382 759 aa3.81□□□□□ -1.8
ABP140YOR239W VMA6P32366 345 aaKnown RBP3.81□□□□□ -1.8
ABP140YOR239W MDJ1P35191 511 aa3.81□□□□□ -1.8
ABP140YOR239W MAE1P36013 669 aaKnown RBP3.81□□□□□ -1.8
ABP140YOR239W ANR2P36090 516 aaPredicted RBP3.81□□□□□ -1.8
ABP140YOR239W NUP133P36161 1157 aa3.81□□□□□ -1.8
ABP140YOR239W YBR139WP38109 508 aa3.81□□□□□ -1.8
ABP140YOR239W RTC3P38804 111 aaPredicted RBP3.81□□□□□ -1.8
ABP140YOR239W STM1P39015 273 aaKnown RBP3.81□□□□□ -1.8
ABP140YOR239W RPL34BP40525 121 aaKnown RBP3.81□□□□□ -1.8
ABP140YOR239W RTS2P40962 232 aa3.81□□□□□ -1.8
ABP140YOR239W YGR210CP42942 411 aa3.81□□□□□ -1.8
ABP140YOR239W FET5P43561 622 aa3.81□□□□□ -1.8
ABP140YOR239W EPL1P43572 832 aa3.81□□□□□ -1.8
ABP140YOR239W CAF40P53829 373 aa3.81□□□□□ -1.8
ABP140YOR239W SSY1Q03770 852 aa3.81□□□□□ -1.8
ABP140YOR239W VTA1Q06263 330 aa3.81□□□□□ -1.8
ABP140YOR239W SNX3Q08826 162 aaKnown RBP3.81□□□□□ -1.8
ABP140YOR239W ATG31Q12421 196 aa3.81□□□□□ -1.8
ABP140YOR239W YOS9Q99220 542 aa3.81□□□□□ -1.8
ABP140YOR239W ILV2P07342 687 aaKnown RBP3.81□□□□□ -1.8
ABP140YOR239W GAL3P13045 520 aa3.81□□□□□ -1.8
ABP140YOR239W KSS1P14681 368 aa3.81□□□□□ -1.8
ABP140YOR239W GLK1P17709 500 aaKnown RBP3.81□□□□□ -1.8
ABP140YOR239W EXO70P19658 623 aa3.81□□□□□ -1.8
ABP140YOR239W PRP5P21372 849 aaPredicted RBP3.81□□□□□ -1.8
ABP140YOR239W CMK2P22517 447 aa3.81□□□□□ -1.8
ABP140YOR239W PTP1P25044 335 aa3.81□□□□□ -1.8
ABP140YOR239W TFB1P32776 642 aa3.81□□□□□ -1.8
ABP140YOR239W IMP3P32899 183 aaPredicted RBP3.81□□□□□ -1.8
ABP140YOR239W KTR2P33550 425 aa3.81□□□□□ -1.8
ABP140YOR239W PEX6P33760 1030 aa3.81□□□□□ -1.8
ABP140YOR239W PMT1P33775 817 aa3.81□□□□□ -1.8
ABP140YOR239W CCZ1P38273 704 aa3.81□□□□□ -1.8
ABP140YOR239W TSC10P38342 320 aa3.81□□□□□ -1.8
ABP140YOR239W TRM5P38793 499 aa3.81□□□□□ -1.8
ABP140YOR239W UTP9P38882 575 aaKnown RBP3.81□□□□□ -1.8
ABP140YOR239W CCT3P39077 534 aaKnown RBP3.81□□□□□ -1.8
ABP140YOR239W MNN9P39107 395 aaKnown RBP3.81□□□□□ -1.8
ABP140YOR239W SEN34P39707 275 aa3.81□□□□□ -1.8
ABP140YOR239W GPB2P39717 880 aa3.81□□□□□ -1.8
ABP140YOR239W SAH1P39954 449 aaKnown RBP3.81□□□□□ -1.8
ABP140YOR239W MAM33P40513 266 aa3.81□□□□□ -1.8
ABP140YOR239W THI12P42883 340 aa3.81□□□□□ -1.8
ABP140YOR239W THI5P43534 340 aa3.81□□□□□ -1.8
ABP140YOR239W ROK1P45818 564 aaPredicted RBP3.81□□□□□ -1.8
ABP140YOR239W NUP85P46673 744 aa3.81□□□□□ -1.8
ABP140YOR239W TIM54P47045 478 aa3.81□□□□□ -1.8
ABP140YOR239W YJR098CP47139 656 aa3.81□□□□□ -1.8
ABP140YOR239W THI11P47183 340 aa3.81□□□□□ -1.8
ABP140YOR239W DIE2P50076 525 aa3.81□□□□□ -1.8
ABP140YOR239W YGR111WP53265 400 aa3.81□□□□□ -1.8
ABP140YOR239W OKP1P53298 406 aa3.81□□□□□ -1.8
ABP140YOR239W SOL4P53315 255 aa3.81□□□□□ -1.8
ABP140YOR239W SDH1Q00711 640 aa3.81□□□□□ -1.8
ABP140YOR239W ACS1Q01574 713 aa3.81□□□□□ -1.8
ABP140YOR239W REC102Q02721 264 aa3.81□□□□□ -1.8
ABP140YOR239W SAS4Q04003 481 aa3.81□□□□□ -1.8
ABP140YOR239W DLT1Q04216 342 aa3.81□□□□□ -1.8
ABP140YOR239W THI13Q07748 340 aa3.81□□□□□ -1.8
ABP140YOR239W SKI7Q08491 747 aaPredicted RBP3.81□□□□□ -1.8
ABP140YOR239W CWC2Q12046 339 aaPredicted RBP3.81□□□□□ -1.8
ABP140YOR239W GTT2Q12390 233 aa3.81□□□□□ -1.8
ABP140YOR239W SET6Q12529 373 aa3.81□□□□□ -1.8
ABP140YOR239W AI5_ALPHAQ9ZZX1 630 aa3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms