RNA–Protein interactions for RNA: YOL142W

RRP40, Transcript of Exosome non-catalytic core component, yeast

Gene RRP40, Length 723 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP40	YOL142W	STB5	P38699	743 aa		5.57	□□□□□ -1.52
RRP40	YOL142W	RPN11	P43588	306 aa	Known RBP	5.57	□□□□□ -1.52
RRP40	YOL142W	PUS4	P48567	403 aa	Known RBP	5.57	□□□□□ -1.52
RRP40	YOL142W	COS12	P53053	380 aa		5.57	□□□□□ -1.52
RRP40	YOL142W	PEX8	P53248	589 aa		5.57	□□□□□ -1.52
RRP40	YOL142W	SND1	Q04007	877 aa		5.57	□□□□□ -1.52
RRP40	YOL142W	IOC4	Q04213	475 aa		5.57	□□□□□ -1.52
RRP40	YOL142W	AAC1	P04710	309 aa		5.56	□□□□□ -1.52
RRP40	YOL142W	CBP3	P21560	335 aa		5.56	□□□□□ -1.52
RRP40	YOL142W	TOM20	P35180	183 aa		5.56	□□□□□ -1.52
RRP40	YOL142W	SAW1	P39735	261 aa		5.56	□□□□□ -1.52
RRP40	YOL142W	NPR2	P39923	615 aa		5.56	□□□□□ -1.52
RRP40	YOL142W	ATG36	P46983	293 aa		5.56	□□□□□ -1.52
RRP40	YOL142W	DSD1	P53095	428 aa		5.56	□□□□□ -1.52
RRP40	YOL142W	RIM13	Q03792	727 aa		5.56	□□□□□ -1.52
RRP40	YOL142W	TRI1	Q05024	226 aa		5.56	□□□□□ -1.52
RRP40	YOL142W	YMR084W	A2P2R3	262 aa		5.55	□□□□□ -1.52
RRP40	YOL142W	VAS1	P07806	1104 aa	Known RBP	5.55	□□□□□ -1.52
RRP40	YOL142W	AQY1	P0CD91	305 aa		5.55	□□□□□ -1.52
RRP40	YOL142W	MRPL9	P31334	269 aa		5.55	□□□□□ -1.52
RRP40	YOL142W	CDC5	P32562	705 aa		5.55	□□□□□ -1.52
RRP40	YOL142W	SDS22	P36047	338 aa		5.55	□□□□□ -1.52
RRP40	YOL142W	SDH8	P38345	138 aa		5.55	□□□□□ -1.52
RRP40	YOL142W	WAR1	Q03631	944 aa		5.55	□□□□□ -1.52
RRP40	YOL142W	PCL8	Q08966	492 aa		5.55	□□□□□ -1.52
RRP40	YOL142W	MPD2	Q99316	277 aa		5.55	□□□□□ -1.52
RRP40	YOL142W	ADH4	P10127	382 aa		5.54	□□□□□ -1.52
RRP40	YOL142W	RPC34	P32910	317 aa		5.54	□□□□□ -1.52
RRP40	YOL142W	ASK10	P48361	1146 aa		5.54	□□□□□ -1.52
RRP40	YOL142W	SEG1	Q04279	960 aa		5.54	□□□□□ -1.52
RRP40	YOL142W	TMA7	Q3E764	64 aa	Known RBP	5.54	□□□□□ -1.52
RRP40	YOL142W	PGK1	P00560	416 aa	Known RBP	5.53	□□□□□ -1.52
RRP40	YOL142W	NUP1	P20676	1076 aa		5.53	□□□□□ -1.52
RRP40	YOL142W	EXO1	P39875	702 aa		5.53	□□□□□ -1.52
RRP40	YOL142W	IMA5	P40884	581 aa		5.53	□□□□□ -1.52
RRP40	YOL142W	YJL043W	P47053	257 aa		5.53	□□□□□ -1.52
RRP40	YOL142W	PAP2	P53632	584 aa	Known RBP	5.53	□□□□□ -1.52
RRP40	YOL142W	YNL092W	P53934	400 aa		5.53	□□□□□ -1.52
RRP40	YOL142W	CEG1	Q01159	459 aa	Predicted RBP	5.53	□□□□□ -1.52
RRP40	YOL142W	ENT2	Q05785	613 aa		5.53	□□□□□ -1.52
RRP40	YOL142W	CRT10	Q08226	957 aa		5.53	□□□□□ -1.52
RRP40	YOL142W	OSM1	P21375	501 aa	Known RBP	5.52	□□□□□ -1.53
RRP40	YOL142W	MBR1	P23493	339 aa		5.52	□□□□□ -1.53
RRP40	YOL142W	HSP104	P31539	908 aa	Known RBP	5.52	□□□□□ -1.53
RRP40	YOL142W	NIC96	P34077	839 aa		5.52	□□□□□ -1.53
RRP40	YOL142W	OPT1	P40897	799 aa		5.52	□□□□□ -1.53
RRP40	YOL142W	TDA10	P42938	290 aa		5.52	□□□□□ -1.53
RRP40	YOL142W	ACS1	Q01574	713 aa		5.52	□□□□□ -1.53
RRP40	YOL142W	APN1	P22936	367 aa		5.51	□□□□□ -1.53
RRP40	YOL142W	YLF2	P38746	405 aa		5.51	□□□□□ -1.53
RRP40	YOL142W	SWD1	P39706	426 aa		5.51	□□□□□ -1.53
RRP40	YOL142W	VFA1	P40080	203 aa		5.51	□□□□□ -1.53
RRP40	YOL142W	IDS2	P46958	469 aa		5.51	□□□□□ -1.53
RRP40	YOL142W	LYS4	P49367	693 aa	Predicted RBP	5.51	□□□□□ -1.53
RRP40	YOL142W	TRS31	Q03337	283 aa		5.51	□□□□□ -1.53
RRP40	YOL142W	PMD1	P32634	1753 aa		5.5	□□□□□ -1.53
RRP40	YOL142W	PRD1	P25375	712 aa		5.5	□□□□□ -1.53
RRP40	YOL142W	PRE2	P30656	287 aa	Known RBP	5.5	□□□□□ -1.53
RRP40	YOL142W	GRX7	P38068	203 aa		5.5	□□□□□ -1.53
RRP40	YOL142W	ARP7	Q12406	477 aa		5.5	□□□□□ -1.53
RRP40	YOL142W	AHA1	Q12449	350 aa	Known RBP	5.5	□□□□□ -1.53
RRP40	YOL142W	YJU2	P28320	278 aa	Predicted RBP	5.49	□□□□□ -1.53
RRP40	YOL142W	GDA1	P32621	518 aa		5.49	□□□□□ -1.53
RRP40	YOL142W	RTR1	P40084	226 aa	Predicted RBP	5.49	□□□□□ -1.53
RRP40	YOL142W	POL31	P46957	487 aa		5.49	□□□□□ -1.53
RRP40	YOL142W	LYS2	P07702	1392 aa		5.49	□□□□□ -1.53
RRP40	YOL142W	RPS7A	P26786	190 aa	Known RBP	5.48	□□□□□ -1.53
RRP40	YOL142W	GSY2	P27472	705 aa		5.48	□□□□□ -1.53
RRP40	YOL142W	APD1	P38281	316 aa		5.48	□□□□□ -1.53
RRP40	YOL142W	ATP23	P53722	227 aa		5.48	□□□□□ -1.53
RRP40	YOL142W	YML119W	Q03208	357 aa		5.48	□□□□□ -1.53
RRP40	YOL142W	CRD1	Q07560	283 aa		5.48	□□□□□ -1.53
RRP40	YOL142W	AAD4	Q07747	329 aa		5.48	□□□□□ -1.53
RRP40	YOL142W	FRE7	Q12333	620 aa		5.48	□□□□□ -1.53
RRP40	YOL142W	CTT1	P06115	562 aa		5.47	□□□□□ -1.53
RRP40	YOL142W	SST2	P11972	698 aa	Known RBP	5.47	□□□□□ -1.53
RRP40	YOL142W	AMD2	P22580	549 aa		5.47	□□□□□ -1.53
RRP40	YOL142W	YCR061W	P25639	631 aa		5.47	□□□□□ -1.53
RRP40	YOL142W	BST1	P43571	1029 aa		5.47	□□□□□ -1.53
RRP40	YOL142W	BNA3	P47039	444 aa	Known RBP	5.47	□□□□□ -1.53
RRP40	YOL142W	MPP10	P47083	593 aa	Known RBP	5.47	□□□□□ -1.53
RRP40	YOL142W	YNL050C	P53952	270 aa		5.47	□□□□□ -1.53
RRP40	YOL142W	HEF3	P53978	1044 aa	Known RBP	5.47	□□□□□ -1.53
RRP40	YOL142W	RAD33	Q04231	177 aa		5.47	□□□□□ -1.53
RRP40	YOL142W	ORM2	Q06144	216 aa		5.47	□□□□□ -1.53
RRP40	YOL142W	DUR1,2	P32528	1835 aa	Known RBP	5.46	□□□□□ -1.53
RRP40	YOL142W	HKR1	P41809	1802 aa		5.46	□□□□□ -1.53
RRP40	YOL142W	MTG2	P38860	518 aa		5.46	□□□□□ -1.54
RRP40	YOL142W	MAM1	P40065	302 aa		5.46	□□□□□ -1.54
RRP40	YOL142W	LTP1	P40347	161 aa		5.46	□□□□□ -1.54
RRP40	YOL142W	XBP1	P40489	647 aa		5.46	□□□□□ -1.54
RRP40	YOL142W	SAE2	P46946	345 aa		5.46	□□□□□ -1.54
RRP40	YOL142W	MAD3	P47074	515 aa		5.46	□□□□□ -1.54
RRP40	YOL142W	MET14	Q02196	202 aa		5.46	□□□□□ -1.54
RRP40	YOL142W	UBP16	Q02863	499 aa		5.46	□□□□□ -1.54
RRP40	YOL142W	IRC3	Q06683	689 aa		5.46	□□□□□ -1.54
RRP40	YOL142W	RDL1	Q12305	139 aa	Known RBP	5.46	□□□□□ -1.54
RRP40	YOL142W	YOL114C	Q12322	202 aa		5.46	□□□□□ -1.54
RRP40	YOL142W	Q0010	Q9ZZX9	128 aa		5.46	□□□□□ -1.54
RRP40	YOL142W	CHO2	P05374	869 aa	Known RBP	5.45	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 20 ms