RNA–Protein interactions for RNA: YLR026C

SED5, Transcript of cis-Golgi t-SNARE syntaxin, yeastyeast

Gene SED5, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED5YLR026C YAT1P80235 687 aa5.32□□□□□ -1.56
SED5YLR026C ARP7Q12406 477 aa5.32□□□□□ -1.56
SED5YLR026C ILV2P07342 687 aaKnown RBP5.31□□□□□ -1.56
SED5YLR026C NIC96P34077 839 aa5.31□□□□□ -1.56
SED5YLR026C NPA3P47122 385 aa5.31□□□□□ -1.56
SED5YLR026C RPL15BP54780 204 aaPredicted RBP5.31□□□□□ -1.56
SED5YLR026C ARA2Q04212 335 aa5.31□□□□□ -1.56
SED5YLR026C MGM1P32266 881 aa5.3□□□□□ -1.56
SED5YLR026C GSH1P32477 678 aa5.3□□□□□ -1.56
SED5YLR026C YPL191CQ08930 360 aa5.3□□□□□ -1.56
SED5YLR026C YOL114CQ12322 202 aa5.3□□□□□ -1.56
SED5YLR026C HIR3P47171 1648 aa5.3□□□□□ -1.56
SED5YLR026C MRPL1Q04599 285 aa5.29□□□□□ -1.56
SED5YLR026C GET3Q12154 354 aaKnown RBP5.29□□□□□ -1.56
SED5YLR026C SEC18P18759 758 aaKnown RBP5.28□□□□□ -1.56
SED5YLR026C PDE1P22434 369 aa5.28□□□□□ -1.56
SED5YLR026C YCP4P25349 247 aaKnown RBP5.28□□□□□ -1.56
SED5YLR026C PTC6P25646 442 aa5.28□□□□□ -1.56
SED5YLR026C PEX8P53248 589 aa5.28□□□□□ -1.56
SED5YLR026C PUF2Q12221 1075 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
SED5YLR026C YBR255C-AQ3E776 120 aa5.28□□□□□ -1.56
SED5YLR026C REV3P14284 1504 aa5.28□□□□□ -1.56
SED5YLR026C COX1P00401 534 aa5.27□□□□□ -1.57
SED5YLR026C YPT1P01123 206 aaKnown RBP5.27□□□□□ -1.57
SED5YLR026C FRD1P32614 470 aaKnown RBP5.27□□□□□ -1.57
SED5YLR026C PXL1P36166 706 aa5.27□□□□□ -1.57
SED5YLR026C STT3P39007 718 aaKnown RBP5.27□□□□□ -1.57
SED5YLR026C AIM17P23180 465 aaKnown RBP5.26□□□□□ -1.57
SED5YLR026C SCO2P38072 301 aa5.26□□□□□ -1.57
SED5YLR026C GND1P38720 489 aaKnown RBP5.26□□□□□ -1.57
SED5YLR026C LYS20P48570 428 aaKnown RBP5.26□□□□□ -1.57
SED5YLR026C ORC5P50874 479 aa5.26□□□□□ -1.57
SED5YLR026C YGR079WP53249 370 aa5.26□□□□□ -1.57
SED5YLR026C MOT3P54785 490 aaKnown RBP5.26□□□□□ -1.57
SED5YLR026C LEA1Q08963 238 aaPredicted RBP5.26□□□□□ -1.57
SED5YLR026C YUR1P26725 428 aa5.25□□□□□ -1.57
SED5YLR026C CAB2P40506 365 aa5.25□□□□□ -1.57
SED5YLR026C YIR016WP40572 265 aa5.25□□□□□ -1.57
SED5YLR026C MEP2P41948 499 aa5.25□□□□□ -1.57
SED5YLR026C MDV1P47025 714 aa5.25□□□□□ -1.57
SED5YLR026C YPR003CP53394 754 aa5.25□□□□□ -1.57
SED5YLR026C TEP1P53916 434 aa5.25□□□□□ -1.57
SED5YLR026C ECM22Q05958 814 aaPredicted RBP5.25□□□□□ -1.57
SED5YLR026C ATX2Q12067 313 aa5.25□□□□□ -1.57
SED5YLR026C RRI1Q12468 440 aa5.25□□□□□ -1.57
SED5YLR026C TMA7Q3E764 64 aaKnown RBP5.25□□□□□ -1.57
SED5YLR026C SIR1P21691 654 aa5.24□□□□□ -1.57
SED5YLR026C SWI4P25302 1093 aaKnown RBP5.24□□□□□ -1.57
SED5YLR026C YJL107CP42947 387 aa5.24□□□□□ -1.57
SED5YLR026C THI3Q07471 609 aa5.24□□□□□ -1.57
SED5YLR026C SNA4Q07549 140 aa5.24□□□□□ -1.57
SED5YLR026C ADE3P07245 946 aaKnown RBP5.23□□□□□ -1.57
SED5YLR026C SST2P11972 698 aaKnown RBP5.23□□□□□ -1.57
SED5YLR026C POL3P15436 1097 aa5.23□□□□□ -1.57
SED5YLR026C LAC1P28496 418 aa5.23□□□□□ -1.57
SED5YLR026C SWC3P31376 625 aa5.23□□□□□ -1.57
SED5YLR026C FUN12P39730 1002 aaKnown RBP5.23□□□□□ -1.57
SED5YLR026C TAM41P53230 385 aa5.23□□□□□ -1.57
SED5YLR026C BPT1P14772 1559 aa5.23□□□□□ -1.57
SED5YLR026C CNA1P23287 553 aa5.22□□□□□ -1.57
SED5YLR026C RIT1P23796 513 aa5.22□□□□□ -1.57
SED5YLR026C MSS51P32335 436 aa5.22□□□□□ -1.57
SED5YLR026C ATO2P32907 282 aa5.22□□□□□ -1.57
SED5YLR026C APM3P38153 483 aa5.22□□□□□ -1.57
SED5YLR026C ARN1P38731 627 aa5.22□□□□□ -1.57
SED5YLR026C STB2P46679 850 aa5.22□□□□□ -1.57
SED5YLR026C UBX6P47049 396 aa5.22□□□□□ -1.57
SED5YLR026C YPT11P48559 417 aa5.22□□□□□ -1.57
SED5YLR026C LSC1P53598 329 aaKnown RBP5.22□□□□□ -1.57
SED5YLR026C YPL108WQ02872 168 aaPredicted RBP5.22□□□□□ -1.57
SED5YLR026C HIM1Q06674 414 aa5.22□□□□□ -1.57
SED5YLR026C URK1P27515 501 aa5.21□□□□□ -1.58
SED5YLR026C TOM71P38825 639 aaKnown RBP5.21□□□□□ -1.58
SED5YLR026C CDC1P40986 491 aa5.21□□□□□ -1.58
SED5YLR026C YDR109CQ04585 715 aa5.21□□□□□ -1.58
SED5YLR026C SUL2Q12325 893 aa5.21□□□□□ -1.58
SED5YLR026C RVB2Q12464 471 aaKnown RBP5.21□□□□□ -1.58
SED5YLR026C PEP1P32319 1579 aa5.21□□□□□ -1.58
SED5YLR026C HES1P35843 434 aa5.2□□□□□ -1.58
SED5YLR026C QRI7P43122 407 aa5.2□□□□□ -1.58
SED5YLR026C YNL144CP53907 740 aa5.2□□□□□ -1.58
SED5YLR026C MET14Q02196 202 aa5.2□□□□□ -1.58
SED5YLR026C VTC3Q02725 835 aa5.2□□□□□ -1.58
SED5YLR026C PDR8Q06149 701 aa5.2□□□□□ -1.58
SED5YLR026C IWR1Q07532 353 aaPredicted RBP5.2□□□□□ -1.58
SED5YLR026C GAL1P04385 528 aa5.19□□□□□ -1.58
SED5YLR026C MCM3P24279 971 aaKnown RBP5.19□□□□□ -1.58
SED5YLR026C YKL133CP36066 463 aa5.19□□□□□ -1.58
SED5YLR026C HIS6P40545 261 aa5.19□□□□□ -1.58
SED5YLR026C ATG21Q02887 496 aa5.19□□□□□ -1.58
SED5YLR026C BRE1Q07457 700 aaKnown RBP5.19□□□□□ -1.58
SED5YLR026C BOP3P53958 396 aa5.18□□□□□ -1.58
SED5YLR026C SRL1Q08673 210 aa5.18□□□□□ -1.58
SED5YLR026C BUD7Q08754 746 aa5.18□□□□□ -1.58
SED5YLR026C UBX3Q12229 455 aa5.18□□□□□ -1.58
SED5YLR026C ATG2P53855 1592 aa5.17□□□□□ -1.58
SED5YLR026C PIF1P07271 859 aa5.17□□□□□ -1.58
SED5YLR026C PET122P10355 254 aa5.17□□□□□ -1.58
SED5YLR026C ARP2P32381 391 aaKnown RBP5.17□□□□□ -1.58
SED5YLR026C TOM20P35180 183 aa5.17□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms