RNA–Protein interactions for RNA: YKL143W

LTV1, Transcript of Component of the GSE complex, yeast

Gene LTV1, Length 1,392 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LTV1	YKL143W	PEX2	P32800	271 aa		4.25	□□□□□ -1.73
LTV1	YKL143W	SSZ1	P38788	538 aa	Known RBP	4.25	□□□□□ -1.73
LTV1	YKL143W	BUD16	P39988	312 aa		4.25	□□□□□ -1.73
LTV1	YKL143W	ESL1	P40456	1118 aa		4.25	□□□□□ -1.73
LTV1	YKL143W	LAM5	P43560	674 aa		4.25	□□□□□ -1.73
LTV1	YKL143W	YJR039W	P47107	1121 aa		4.25	□□□□□ -1.73
LTV1	YKL143W	NPA3	P47122	385 aa		4.25	□□□□□ -1.73
LTV1	YKL143W	PIL1	P53252	339 aa	Known RBP	4.25	□□□□□ -1.73
LTV1	YKL143W	CAF130	P53280	1122 aa	Predicted RBP	4.25	□□□□□ -1.73
LTV1	YKL143W	YDL057W	Q07379	328 aa		4.25	□□□□□ -1.73
LTV1	YKL143W	YTM1	Q12024	460 aa	Predicted RBP	4.25	□□□□□ -1.73
LTV1	YKL143W	TRM13	Q12383	476 aa		4.25	□□□□□ -1.73
LTV1	YKL143W	MET3	P08536	511 aa		4.24	□□□□□ -1.73
LTV1	YKL143W	ISY1	P21374	235 aa	Predicted RBP	4.24	□□□□□ -1.73
LTV1	YKL143W	RSA4	P25382	515 aa	Known RBP	4.24	□□□□□ -1.73
LTV1	YKL143W	DPH2	P32461	534 aa		4.24	□□□□□ -1.73
LTV1	YKL143W	MAL33	P38157	468 aa		4.24	□□□□□ -1.73
LTV1	YKL143W	VID24	P38263	362 aa		4.24	□□□□□ -1.73
LTV1	YKL143W	YHR112C	P38716	378 aa		4.24	□□□□□ -1.73
LTV1	YKL143W	OAF1	P39720	1047 aa	Predicted RBP	4.24	□□□□□ -1.73
LTV1	YKL143W	YIR016W	P40572	265 aa		4.24	□□□□□ -1.73
LTV1	YKL143W	THI6	P41835	540 aa		4.24	□□□□□ -1.73
LTV1	YKL143W	GZF3	P42944	551 aa	Known RBP	4.24	□□□□□ -1.73
LTV1	YKL143W	VID30	P53076	958 aa		4.24	□□□□□ -1.73
LTV1	YKL143W	TAM41	P53230	385 aa		4.24	□□□□□ -1.73
LTV1	YKL143W	TEX1	P53851	422 aa	Known RBP	4.24	□□□□□ -1.73
LTV1	YKL143W	GPD1	Q00055	391 aa	Known RBP	4.24	□□□□□ -1.73
LTV1	YKL143W	ARG5,6	Q01217	863 aa		4.24	□□□□□ -1.73
LTV1	YKL143W	DLT1	Q04216	342 aa		4.24	□□□□□ -1.73
LTV1	YKL143W	GAD1	Q04792	585 aa		4.24	□□□□□ -1.73
LTV1	YKL143W	FAB1	P34756	2278 aa		4.23	□□□□□ -1.73
LTV1	YKL143W	SSB1	P11484	613 aa	Known RBP	4.23	□□□□□ -1.73
LTV1	YKL143W	CKA2	P19454	339 aa		4.23	□□□□□ -1.73
LTV1	YKL143W	MBR1	P23493	339 aa		4.23	□□□□□ -1.73
LTV1	YKL143W	ERG4	P25340	473 aa		4.23	□□□□□ -1.73
LTV1	YKL143W	RDS1	P25611	832 aa		4.23	□□□□□ -1.73
LTV1	YKL143W	SYN8	P31377	255 aa		4.23	□□□□□ -1.73
LTV1	YKL143W	BUD2	P33314	1104 aa		4.23	□□□□□ -1.73
LTV1	YKL143W	PRX1	P34227	261 aa	Known RBP	4.23	□□□□□ -1.73
LTV1	YKL143W	MRPL7	P36519	292 aa		4.23	□□□□□ -1.73
LTV1	YKL143W	CCL1	P37366	393 aa		4.23	□□□□□ -1.73
LTV1	YKL143W	MRX3	P38172	270 aa		4.23	□□□□□ -1.73
LTV1	YKL143W	YHR202W	P38887	602 aa		4.23	□□□□□ -1.73
LTV1	YKL143W	ECM1	P39715	212 aa		4.23	□□□□□ -1.73
LTV1	YKL143W	YER186C	P40101	306 aa		4.23	□□□□□ -1.73
LTV1	YKL143W	SSB2	P40150	613 aa	Known RBP	4.23	□□□□□ -1.73
LTV1	YKL143W	ELO3	P40319	345 aa		4.23	□□□□□ -1.73
LTV1	YKL143W	CCT5	P40413	562 aa	Known RBP	4.23	□□□□□ -1.73
LTV1	YKL143W	SNM1	P40993	198 aa		4.23	□□□□□ -1.73
LTV1	YKL143W	MAF1	P41910	395 aa		4.23	□□□□□ -1.73
LTV1	YKL143W	SET2	P46995	733 aa	Known RBP	4.23	□□□□□ -1.73
LTV1	YKL143W	MUP1	P50276	574 aa		4.23	□□□□□ -1.73
LTV1	YKL143W	ALT2	P52892	507 aa		4.23	□□□□□ -1.73
LTV1	YKL143W	CUL3	P53202	744 aa		4.23	□□□□□ -1.73
LTV1	YKL143W	TOF1	P53840	1238 aa		4.23	□□□□□ -1.73
LTV1	YKL143W	RTC4	P53850	401 aa		4.23	□□□□□ -1.73
LTV1	YKL143W	ECM9	Q02202	377 aa		4.23	□□□□□ -1.73
LTV1	YKL143W	ECM7	Q06200	448 aa		4.23	□□□□□ -1.73
LTV1	YKL143W	PKH2	Q12236	1081 aa	Known RBP	4.23	□□□□□ -1.73
LTV1	YKL143W	RPL4A	P10664	362 aa	Known RBP	4.22	□□□□□ -1.73
LTV1	YKL143W	PGI1	P12709	554 aa	Known RBP	4.22	□□□□□ -1.73
LTV1	YKL143W	PEX1	P24004	1043 aa		4.22	□□□□□ -1.73
LTV1	YKL143W	MCM3	P24279	971 aa	Known RBP	4.22	□□□□□ -1.73
LTV1	YKL143W	YSC83	P32792	385 aa		4.22	□□□□□ -1.73
LTV1	YKL143W	HEL1	P36113	551 aa		4.22	□□□□□ -1.73
LTV1	YKL143W	APT2	P36973	181 aa		4.22	□□□□□ -1.73
LTV1	YKL143W	KTR4	P38131	464 aa		4.22	□□□□□ -1.73
LTV1	YKL143W	PPS1	P38148	807 aa		4.22	□□□□□ -1.73
LTV1	YKL143W	MNN11	P46985	422 aa	Known RBP	4.22	□□□□□ -1.73
LTV1	YKL143W	BFA1	P47113	574 aa		4.22	□□□□□ -1.73
LTV1	YKL143W	RPL4B	P49626	362 aa	Known RBP	4.22	□□□□□ -1.73
LTV1	YKL143W	AMA1	P50082	593 aa		4.22	□□□□□ -1.73
LTV1	YKL143W	STB4	P50104	949 aa		4.22	□□□□□ -1.73
LTV1	YKL143W	ORC5	P50874	479 aa		4.22	□□□□□ -1.73
LTV1	YKL143W	VTC3	Q02725	835 aa		4.22	□□□□□ -1.73
LTV1	YKL143W	TRS130	Q03660	1102 aa		4.22	□□□□□ -1.73
LTV1	YKL143W	PIG1	Q06216	648 aa		4.22	□□□□□ -1.73
LTV1	YKL143W	MCM21	Q06675	368 aa		4.22	□□□□□ -1.73
LTV1	YKL143W	YLR040C	Q07988	224 aa		4.22	□□□□□ -1.73
LTV1	YKL143W	SGO1	Q08490	590 aa		4.22	□□□□□ -1.73
LTV1	YKL143W	TMA17	Q12513	150 aa		4.22	□□□□□ -1.73
LTV1	YKL143W	RPS21B	Q3E754	87 aa	Known RBP	4.22	□□□□□ -1.73
LTV1	YKL143W	FOB1	O13329	566 aa		4.21	□□□□□ -1.74
LTV1	YKL143W	HIS4	P00815	799 aa	Known RBP	4.21	□□□□□ -1.74
LTV1	YKL143W	LAT1	P12695	482 aa	Known RBP	4.21	□□□□□ -1.74
LTV1	YKL143W	PPZ1	P26570	692 aa		4.21	□□□□□ -1.74
LTV1	YKL143W	YBR053C	P38235	358 aa		4.21	□□□□□ -1.74
LTV1	YKL143W	GID8	P40208	455 aa		4.21	□□□□□ -1.74
LTV1	YKL143W	ALG11	P53954	548 aa	Known RBP	4.21	□□□□□ -1.74
LTV1	YKL143W	REC102	Q02721	264 aa		4.21	□□□□□ -1.74
LTV1	YKL143W	MRI1	Q06489	411 aa	Known RBP	4.21	□□□□□ -1.74
LTV1	YKL143W	SHS1	Q07657	551 aa		4.21	□□□□□ -1.74
LTV1	YKL143W	PSR2	Q07949	397 aa		4.21	□□□□□ -1.74
LTV1	YKL143W	FRE5	Q08908	694 aa		4.21	□□□□□ -1.74
LTV1	YKL143W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
LTV1	YKL143W	LAA1	P39526	2014 aa		4.21	□□□□□ -1.74
LTV1	YKL143W	SNF1	P06782	633 aa	Known RBP	4.2	□□□□□ -1.74
LTV1	YKL143W	PYC1	P11154	1178 aa	Known RBP	4.2	□□□□□ -1.74
LTV1	YKL143W	ERG6	P25087	383 aa	Known RBP	4.2	□□□□□ -1.74
LTV1	YKL143W	RPC53	P25441	422 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms