RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W RFS1P38234 210 aaKnown RBP5.96□□□□□ -1.46
SKN1YGR143W MSS4P38994 779 aa5.96□□□□□ -1.46
SKN1YGR143W NEO1P40527 1151 aa5.96□□□□□ -1.46
SKN1YGR143W SWP82P43554 623 aa5.96□□□□□ -1.46
SKN1YGR143W EPL1P43572 832 aa5.96□□□□□ -1.46
SKN1YGR143W YJR141WP47172 347 aaPredicted RBP5.96□□□□□ -1.46
SKN1YGR143W MNT2P53059 558 aa5.96□□□□□ -1.46
SKN1YGR143W MET13P53128 600 aa5.96□□□□□ -1.46
SKN1YGR143W DSE3Q08729 430 aa5.96□□□□□ -1.46
SKN1YGR143W MSC6Q08818 692 aaKnown RBP5.96□□□□□ -1.46
SKN1YGR143W OSW2Q12202 724 aa5.96□□□□□ -1.46
SKN1YGR143W EMP46Q12396 444 aa5.96□□□□□ -1.46
SKN1YGR143W CBP2P03874 630 aaPredicted RBP5.95□□□□□ -1.46
SKN1YGR143W CHO2P05374 869 aaKnown RBP5.95□□□□□ -1.46
SKN1YGR143W RPL6BP05739 176 aaKnown RBP5.95□□□□□ -1.46
SKN1YGR143W CLN2P20438 545 aa5.95□□□□□ -1.46
SKN1YGR143W AEP2P22136 580 aa5.95□□□□□ -1.46
SKN1YGR143W PCS60P38137 543 aaKnown RBP RIP-Chip data5.95□□□□□ -1.46not detected
SKN1YGR143W RCK2P38623 610 aa5.95□□□□□ -1.46
SKN1YGR143W GND1P38720 489 aaKnown RBP5.95□□□□□ -1.46
SKN1YGR143W AIM2P39721 246 aa5.95□□□□□ -1.46
SKN1YGR143W TIF4631P39935 952 aaKnown RBP5.95□□□□□ -1.46
SKN1YGR143W YER184CP39961 794 aa5.95□□□□□ -1.46
SKN1YGR143W PCL7P40186 285 aa5.95□□□□□ -1.46
SKN1YGR143W SER33P40510 469 aa5.95□□□□□ -1.46
SKN1YGR143W LSM8P47093 109 aaKnown RBP5.95□□□□□ -1.46
SKN1YGR143W PEX29Q03370 554 aa5.95□□□□□ -1.46
SKN1YGR143W MHR1Q06630 226 aa5.95□□□□□ -1.46
SKN1YGR143W GET4Q12125 312 aa5.95□□□□□ -1.46
SKN1YGR143W TAH18Q12181 623 aa5.95□□□□□ -1.46
SKN1YGR143W YOR131CQ12486 218 aa5.95□□□□□ -1.46
SKN1YGR143W MET6P05694 767 aaKnown RBP5.94□□□□□ -1.46
SKN1YGR143W MATALPHA2P0CY08 210 aa5.94□□□□□ -1.46
SKN1YGR143W HMLALPHA2P0CY09 210 aa5.94□□□□□ -1.46
SKN1YGR143W ADP1P25371 1049 aa5.94□□□□□ -1.46
SKN1YGR143W YDJ1P25491 409 aaKnown RBP5.94□□□□□ -1.46
SKN1YGR143W NAM7P30771 971 aaKnown RBP5.94□□□□□ -1.46
SKN1YGR143W MRT4P33201 236 aaKnown RBP5.94□□□□□ -1.46
SKN1YGR143W LRG1P35688 1017 aa5.94□□□□□ -1.46
SKN1YGR143W SEC31P38968 1273 aaKnown RBP5.94□□□□□ -1.46
SKN1YGR143W IES5P40060 125 aa5.94□□□□□ -1.46
SKN1YGR143W INP51P40559 946 aaKnown RBP5.94□□□□□ -1.46
SKN1YGR143W ZIM17P42844 174 aa5.94□□□□□ -1.46
SKN1YGR143W SEH1P53011 349 aaKnown RBP5.94□□□□□ -1.46
SKN1YGR143W MRPS35P53292 345 aa5.94□□□□□ -1.46
SKN1YGR143W BOP3P53958 396 aa5.94□□□□□ -1.46
SKN1YGR143W JIP4Q03361 876 aa5.94□□□□□ -1.46
SKN1YGR143W SSY1Q03770 852 aa5.94□□□□□ -1.46
SKN1YGR143W GPI17Q04080 534 aa5.94□□□□□ -1.46
SKN1YGR143W FMP42Q04991 504 aa5.94□□□□□ -1.46
SKN1YGR143W PEX15Q08215 383 aa5.94□□□□□ -1.46
SKN1YGR143W NUR1Q12066 484 aa5.94□□□□□ -1.46
SKN1YGR143W TDH1P00360 332 aaKnown RBP5.94□□□□□ -1.46
SKN1YGR143W SCEIP03882 235 aa5.94□□□□□ -1.46
SKN1YGR143W RPL24AP04449 155 aaKnown RBP5.94□□□□□ -1.46
SKN1YGR143W ARG3P05150 338 aa5.94□□□□□ -1.46
SKN1YGR143W GPA1P08539 472 aa5.94□□□□□ -1.46
SKN1YGR143W PUT4P15380 627 aa5.94□□□□□ -1.46
SKN1YGR143W YPK2P18961 677 aa5.94□□□□□ -1.46
SKN1YGR143W HXT2P23585 541 aa5.94□□□□□ -1.46
SKN1YGR143W VMA16P23968 213 aa5.94□□□□□ -1.46
SKN1YGR143W DPH2P32461 534 aa5.94□□□□□ -1.46
SKN1YGR143W MRPL7P36519 292 aa5.94□□□□□ -1.46
SKN1YGR143W YBR062CP38239 180 aa5.94□□□□□ -1.46
SKN1YGR143W YHR112CP38716 378 aa5.94□□□□□ -1.46
SKN1YGR143W SMF1P38925 575 aa5.94□□□□□ -1.46
SKN1YGR143W PRM9P39551 298 aa5.94□□□□□ -1.46
SKN1YGR143W UTP25P40498 721 aaKnown RBP5.94□□□□□ -1.46
SKN1YGR143W YAP5P40574 245 aa5.94□□□□□ -1.46
SKN1YGR143W GUS1P46655 708 aaKnown RBP RIP-Chip data5.94□□□□□ -1.46not detected
SKN1YGR143W HSH155P49955 971 aaKnown RBP5.94□□□□□ -1.46
SKN1YGR143W RRT6P53117 311 aaPredicted RBP5.94□□□□□ -1.46
SKN1YGR143W YGR111WP53265 400 aa5.94□□□□□ -1.46
SKN1YGR143W NSE5Q03718 556 aa5.94□□□□□ -1.46
SKN1YGR143W YAP7Q08182 245 aa5.94□□□□□ -1.46
SKN1YGR143W SAM3Q08986 587 aa5.94□□□□□ -1.46
SKN1YGR143W LAP2Q10740 671 aa5.94□□□□□ -1.46
SKN1YGR143W PMA1P05030 918 aaKnown RBP5.93□□□□□ -1.46
SKN1YGR143W PHO8P11491 566 aa5.93□□□□□ -1.46
SKN1YGR143W SEC65P29478 273 aa5.93□□□□□ -1.46
SKN1YGR143W YBR138CP38277 524 aa5.93□□□□□ -1.46
SKN1YGR143W IMD2P38697 523 aaKnown RBP5.93□□□□□ -1.46
SKN1YGR143W PIG2P40187 538 aa5.93□□□□□ -1.46
SKN1YGR143W YMR134WP40207 237 aa5.93□□□□□ -1.46
SKN1YGR143W NDE1P40215 560 aa5.93□□□□□ -1.46
SKN1YGR143W ERG10P41338 398 aaKnown RBP5.93□□□□□ -1.46
SKN1YGR143W BPL1P48445 690 aaPredicted RBP5.93□□□□□ -1.46
SKN1YGR143W PIP2P52960 996 aa5.93□□□□□ -1.46
SKN1YGR143W DAM1P53267 343 aa5.93□□□□□ -1.46
SKN1YGR143W UTP14Q04500 899 aaKnown RBP5.93□□□□□ -1.46
SKN1YGR143W ESF1Q06344 628 aaKnown RBP5.93□□□□□ -1.46
SKN1YGR143W HRK1Q08732 759 aaKnown RBP5.93□□□□□ -1.46
SKN1YGR143W MUM3Q08750 479 aa5.93□□□□□ -1.46
SKN1YGR143W TRE1Q08919 783 aa5.93□□□□□ -1.46
SKN1YGR143W AIM41Q12032 185 aa5.93□□□□□ -1.46
SKN1YGR143W MPD2Q99316 277 aa5.93□□□□□ -1.46
SKN1YGR143W MET3P08536 511 aa5.93□□□□□ -1.46
SKN1YGR143W CIT2P08679 460 aa5.93□□□□□ -1.46
SKN1YGR143W GAL2P13181 574 aa5.93□□□□□ -1.46
SKN1YGR143W RIT1P23796 513 aa5.93□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms