RNA–Protein interactions for RNA: YGR063C

SPT4, Transcript of Component of the universally conserved Spt4/5 complex (DSIF complex), yeastyeast

Gene SPT4, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT4YGR063C DLT1Q04216 342 aa3.54□□□□□ -1.84
SPT4YGR063C YMR226CQ05016 267 aaKnown RBP3.54□□□□□ -1.84
SPT4YGR063C ADE13Q05911 482 aaKnown RBP3.54□□□□□ -1.84
SPT4YGR063C CRN1Q06440 651 aa3.54□□□□□ -1.84
SPT4YGR063C YLR352WQ06479 807 aa3.54□□□□□ -1.84
SPT4YGR063C CDA1Q06702 301 aa3.54□□□□□ -1.84
SPT4YGR063C YDL124WQ07551 312 aaKnown RBP3.54□□□□□ -1.84
SPT4YGR063C ISA1Q07821 250 aaPredicted RBP3.54□□□□□ -1.84
SPT4YGR063C LOT6Q07923 191 aa3.54□□□□□ -1.84
SPT4YGR063C PEX15Q08215 383 aa3.54□□□□□ -1.84
SPT4YGR063C NBA1Q08229 501 aaKnown RBP3.54□□□□□ -1.84
SPT4YGR063C MCH5Q08777 521 aa3.54□□□□□ -1.84
SPT4YGR063C FEX1Q08913 375 aa3.54□□□□□ -1.84
SPT4YGR063C GTT2Q12390 233 aa3.54□□□□□ -1.84
SPT4YGR063C YOR131CQ12486 218 aa3.54□□□□□ -1.84
SPT4YGR063C AVL9Q12500 764 aa3.54□□□□□ -1.84
SPT4YGR063C PTC5Q12511 572 aa3.54□□□□□ -1.84
SPT4YGR063C APM4Q99186 491 aa3.54□□□□□ -1.84
SPT4YGR063C AI5_ALPHAQ9ZZX1 630 aa3.54□□□□□ -1.84
SPT4YGR063C RPN13O13563 156 aa3.53□□□□□ -1.84
SPT4YGR063C CBP2P03874 630 aaPredicted RBP3.53□□□□□ -1.84
SPT4YGR063C PAB1P04147 577 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84 RIP-Chip
SPT4YGR063C RPL25P04456 142 aaKnown RBP3.53□□□□□ -1.84
SPT4YGR063C CDC6P09119 513 aa3.53□□□□□ -1.84
SPT4YGR063C DSF1P0CX08 502 aa3.53□□□□□ -1.84
SPT4YGR063C YNR073CP0CX09 502 aa3.53□□□□□ -1.84
SPT4YGR063C SPO16P17122 198 aa3.53□□□□□ -1.84
SPT4YGR063C CLN2P20438 545 aa3.53□□□□□ -1.84
SPT4YGR063C PRI2P20457 528 aa3.53□□□□□ -1.84
SPT4YGR063C KGD1P20967 1014 aaKnown RBP3.53□□□□□ -1.84
SPT4YGR063C RAM1P22007 431 aa3.53□□□□□ -1.84
SPT4YGR063C YSP3P25036 478 aa3.53□□□□□ -1.84
SPT4YGR063C GFD2P25370 566 aaKnown RBP3.53□□□□□ -1.84
SPT4YGR063C CWH43P25618 953 aa3.53□□□□□ -1.84
SPT4YGR063C PTC6P25646 442 aa3.53□□□□□ -1.84
SPT4YGR063C KRE2P27809 442 aa3.53□□□□□ -1.84
SPT4YGR063C SSE2P32590 693 aaKnown RBP3.53□□□□□ -1.84
SPT4YGR063C IMP3P32899 183 aaPredicted RBP3.53□□□□□ -1.84
SPT4YGR063C PEX6P33760 1030 aa3.53□□□□□ -1.84
SPT4YGR063C SIP2P34164 415 aaKnown RBP3.53□□□□□ -1.84
SPT4YGR063C RPC25P35718 212 aa3.53□□□□□ -1.84
SPT4YGR063C CCL1P37366 393 aa3.53□□□□□ -1.84
SPT4YGR063C ARA1P38115 344 aa3.53□□□□□ -1.84
SPT4YGR063C PCS60P38137 543 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
SPT4YGR063C GRE3P38715 327 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
SPT4YGR063C OCA5P38738 679 aa3.53□□□□□ -1.84
SPT4YGR063C YHR045WP38775 560 aa3.53□□□□□ -1.84
SPT4YGR063C RTC3P38804 111 aaPredicted RBP3.53□□□□□ -1.84
SPT4YGR063C CRG1P38892 291 aaRIP-Chip data3.53□□□□□ -1.84not detected
SPT4YGR063C IPL1P38991 367 aa3.53□□□□□ -1.84
SPT4YGR063C MNN9P39107 395 aaKnown RBP3.53□□□□□ -1.84
SPT4YGR063C AIM2P39721 246 aa3.53□□□□□ -1.84
SPT4YGR063C YIL077CP40508 320 aa3.53□□□□□ -1.84
SPT4YGR063C GTT1P40582 234 aa3.53□□□□□ -1.84
SPT4YGR063C MSS2P40990 351 aa3.53□□□□□ -1.84
SPT4YGR063C MID1P41821 548 aa3.53□□□□□ -1.84
SPT4YGR063C YFL034WP43564 1073 aa3.53□□□□□ -1.84
SPT4YGR063C NUP85P46673 744 aa3.53□□□□□ -1.84
SPT4YGR063C RAD17P48581 401 aa3.53□□□□□ -1.84
SPT4YGR063C SAP4P53036 818 aa3.53□□□□□ -1.84
SPT4YGR063C MNP1P53163 194 aaPredicted RBP3.53□□□□□ -1.84
SPT4YGR063C YTP1P53584 459 aa3.53□□□□□ -1.84
SPT4YGR063C CAF40P53829 373 aa3.53□□□□□ -1.84
SPT4YGR063C RSC9Q03124 581 aa3.53□□□□□ -1.84
SPT4YGR063C YDR249CQ03787 373 aa3.53□□□□□ -1.84
SPT4YGR063C TIF35Q04067 274 aaKnown RBP3.53□□□□□ -1.84
SPT4YGR063C SPO20Q04359 397 aa3.53□□□□□ -1.84
SPT4YGR063C BUR2Q05949 395 aa3.53□□□□□ -1.84
SPT4YGR063C DUS3Q06053 668 aaKnown RBP3.53□□□□□ -1.84
SPT4YGR063C PDR8Q06149 701 aa3.53□□□□□ -1.84
SPT4YGR063C EST2Q06163 884 aa3.53□□□□□ -1.84
SPT4YGR063C DBP9Q06218 594 aaKnown RBP3.53□□□□□ -1.84
SPT4YGR063C YPR078CQ06813 372 aa3.53□□□□□ -1.84
SPT4YGR063C FMP45Q07651 309 aa3.53□□□□□ -1.84
SPT4YGR063C NTG2Q08214 380 aa3.53□□□□□ -1.84
SPT4YGR063C THP3Q12049 470 aaKnown RBP3.53□□□□□ -1.84
SPT4YGR063C YOL107WQ12239 342 aa3.53□□□□□ -1.84
SPT4YGR063C HRT3Q12347 344 aa3.53□□□□□ -1.84
SPT4YGR063C LAG2Q92325 660 aa3.53□□□□□ -1.84
SPT4YGR063C FAS2P19097 1887 aaKnown RBP3.52□□□□□ -1.85
SPT4YGR063C COX6P00427 148 aa3.52□□□□□ -1.85
SPT4YGR063C SCP160P06105 1222 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
SPT4YGR063C TPK2P06245 380 aa3.52□□□□□ -1.85
SPT4YGR063C HSF1P10961 833 aa3.52□□□□□ -1.85
SPT4YGR063C GAL3P13045 520 aa3.52□□□□□ -1.85
SPT4YGR063C HOM2P13663 365 aaKnown RBP3.52□□□□□ -1.85
SPT4YGR063C PDC5P16467 563 aaKnown RBP3.52□□□□□ -1.85
SPT4YGR063C VPS33P20795 691 aa3.52□□□□□ -1.85
SPT4YGR063C CNB1P25296 175 aa3.52□□□□□ -1.85
SPT4YGR063C HEM3P28789 327 aa3.52□□□□□ -1.85
SPT4YGR063C CCR4P31384 837 aaKnown RBP3.52□□□□□ -1.85
SPT4YGR063C DGR2P32330 852 aa3.52□□□□□ -1.85
SPT4YGR063C SPT14P32363 452 aa3.52□□□□□ -1.85
SPT4YGR063C DOA4P32571 926 aa3.52□□□□□ -1.85
SPT4YGR063C RRN6P32786 894 aa3.52□□□□□ -1.85
SPT4YGR063C VAM7P32912 316 aa3.52□□□□□ -1.85
SPT4YGR063C PPQ1P32945 549 aa3.52□□□□□ -1.85
SPT4YGR063C MDJ1P35191 511 aa3.52□□□□□ -1.85
SPT4YGR063C YKL050CP35736 922 aa3.52□□□□□ -1.85
SPT4YGR063C MCD4P36051 919 aa3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms