RNA–Protein interactions for RNA: YDR371W

CTS2, Transcript of Putative chitinase, yeast

Gene CTS2, Length 1,536 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTS2	YDR371W	SLM3	Q12093	417 aa		5.59	□□□□□ -1.51
CTS2	YDR371W	LEU2	P04173	364 aa	Predicted RBP	5.58	□□□□□ -1.52
CTS2	YDR371W	SNF1	P06782	633 aa	Known RBP	5.58	□□□□□ -1.52
CTS2	YDR371W	GAL7	P08431	366 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	SEN2	P16658	377 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	CDC42	P19073	191 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	CKA2	P19454	339 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	ADK2	P26364	225 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	TAT1	P38085	619 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	TCD1	P38756	429 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	YIL089W	P40500	205 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	YIL077C	P40508	320 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	LYS14	P40971	790 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	THI6	P41835	540 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	GNP1	P48813	663 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	MRPL13	Q02204	264 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	EGD1	Q02642	157 aa	Known RBP	5.58	□□□□□ -1.52
CTS2	YDR371W	RPM2	Q02773	1202 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	ERB1	Q04660	807 aa	Known RBP	5.58	□□□□□ -1.52
CTS2	YDR371W	YLR456W	Q06199	204 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	HAL9	Q12180	1030 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	RBD2	Q12270	262 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	PCD1	Q12524	340 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	TEF1	P02994	458 aa	Known RBP	5.58	□□□□□ -1.52
CTS2	YDR371W	TPK1	P06244	397 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	YML002W	P0CF17	737 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	MTF2	P10849	440 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	SEC15	P22224	910 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	YCL049C	P25577	312 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	CWH43	P25618	953 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	PHO91	P27514	894 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	MSN4	P33749	630 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	UBP13	P38187	747 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	MMS4	P38257	691 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	SIC1	P38634	284 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	SIP3	P38717	1229 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	YDR089W	P38966	869 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	RVS167	P39743	482 aa	Known RBP	5.58	□□□□□ -1.52
CTS2	YDR371W	FET5	P43561	622 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	UBP6	P43593	499 aa	Known RBP	5.58	□□□□□ -1.52
CTS2	YDR371W	ASE1	P50275	885 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	ECM18	Q04623	453 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	NDL1	Q06568	189 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	SOG2	Q08817	791 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	TGL5	Q12043	749 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	CMC2	Q3E7A4	109 aa		5.58	□□□□□ -1.52
CTS2	YDR371W	CAR2	P07991	424 aa	Known RBP	5.57	□□□□□ -1.52
CTS2	YDR371W	FUM1	P08417	488 aa	Known RBP	5.57	□□□□□ -1.52
CTS2	YDR371W	RPI1	P23250	407 aa	Known RBP	5.57	□□□□□ -1.52
CTS2	YDR371W	GCS1	P35197	352 aa		5.57	□□□□□ -1.52
CTS2	YDR371W	YKR018C	P36114	725 aa		5.57	□□□□□ -1.52
CTS2	YDR371W	GPT2	P36148	743 aa		5.57	□□□□□ -1.52
CTS2	YDR371W	YHL017W	P38745	532 aa		5.57	□□□□□ -1.52
CTS2	YDR371W	MNL1	P38888	796 aa		5.57	□□□□□ -1.52
CTS2	YDR371W	DUN1	P39009	513 aa		5.57	□□□□□ -1.52
CTS2	YDR371W	YEL025C	P39991	1188 aa		5.57	□□□□□ -1.52
CTS2	YDR371W	YER010C	P40011	234 aa		5.57	□□□□□ -1.52
CTS2	YDR371W	YRB2	P40517	327 aa		5.57	□□□□□ -1.52
CTS2	YDR371W	ASK10	P48361	1146 aa		5.57	□□□□□ -1.52
CTS2	YDR371W	PRB1	P09232	635 aa		5.56	□□□□□ -1.52
CTS2	YDR371W	HEM1	P09950	548 aa	Predicted RBP	5.56	□□□□□ -1.52
CTS2	YDR371W	ADE2	P21264	571 aa	Known RBP	5.56	□□□□□ -1.52
CTS2	YDR371W	CLB1	P24868	471 aa		5.56	□□□□□ -1.52
CTS2	YDR371W	SAC6	P32599	642 aa	Known RBP	5.56	□□□□□ -1.52
CTS2	YDR371W	HBS1	P32769	611 aa	Known RBP	5.56	□□□□□ -1.52
CTS2	YDR371W	DOM34	P33309	386 aa		5.56	□□□□□ -1.52
CTS2	YDR371W	RSM22	P36056	628 aa		5.56	□□□□□ -1.52
CTS2	YDR371W	STB6	P36085	766 aa		5.56	□□□□□ -1.52
CTS2	YDR371W	KEL1	P38853	1164 aa	Known RBP	5.56	□□□□□ -1.52
CTS2	YDR371W	PIK1	P39104	1066 aa		5.56	□□□□□ -1.52
CTS2	YDR371W	SPO22	P40511	975 aa		5.56	□□□□□ -1.52
CTS2	YDR371W	YJR124C	P47159	448 aa		5.56	□□□□□ -1.52
CTS2	YDR371W	TOM22	P49334	152 aa		5.56	□□□□□ -1.52
CTS2	YDR371W	CUL3	P53202	744 aa		5.56	□□□□□ -1.52
CTS2	YDR371W	YGR067C	P53243	804 aa		5.56	□□□□□ -1.52
CTS2	YDR371W	DCP2	P53550	970 aa	Known RBP	5.56	□□□□□ -1.52
CTS2	YDR371W	PDR16	P53860	351 aa	Known RBP	5.56	□□□□□ -1.52
CTS2	YDR371W	MRPS17	Q03246	237 aa	Predicted RBP	5.56	□□□□□ -1.52
CTS2	YDR371W	GTB1	Q04924	702 aa		5.56	□□□□□ -1.52
CTS2	YDR371W	DIB1	Q06819	143 aa	Predicted RBP	5.56	□□□□□ -1.52
CTS2	YDR371W	GLO4	Q12320	285 aa		5.56	□□□□□ -1.52
CTS2	YDR371W	RPS9B	P05755	195 aa	Known RBP	5.55	□□□□□ -1.52
CTS2	YDR371W	NUC1	P08466	329 aa		5.55	□□□□□ -1.52
CTS2	YDR371W	FBP1	P09201	348 aa		5.55	□□□□□ -1.52
CTS2	YDR371W	APE1	P14904	514 aa		5.55	□□□□□ -1.52
CTS2	YDR371W	FUS3	P16892	353 aa	Known RBP	5.55	□□□□□ -1.52
CTS2	YDR371W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	5.55	□□□□□ -1.52	not detected
CTS2	YDR371W	EMC1	P25574	760 aa		5.55	□□□□□ -1.52
CTS2	YDR371W	SYP1	P25623	870 aa	Known RBP	5.55	□□□□□ -1.52
CTS2	YDR371W	SRB2	P34162	210 aa		5.55	□□□□□ -1.52
CTS2	YDR371W	DAD2	P36162	133 aa		5.55	□□□□□ -1.52
CTS2	YDR371W	APM3	P38153	483 aa		5.55	□□□□□ -1.52
CTS2	YDR371W	PCM1	P38628	557 aa	Known RBP	5.55	□□□□□ -1.52
CTS2	YDR371W	SAW1	P39735	261 aa		5.55	□□□□□ -1.52
CTS2	YDR371W	MRX1	P40050	688 aa		5.55	□□□□□ -1.52
CTS2	YDR371W	EFM4	P40516	257 aa		5.55	□□□□□ -1.52
CTS2	YDR371W	LSB6	P42951	607 aa		5.55	□□□□□ -1.52
CTS2	YDR371W	YDL183C	P48569	320 aa		5.55	□□□□□ -1.52
CTS2	YDR371W	YNR065C	P53751	1116 aa		5.55	□□□□□ -1.52
CTS2	YDR371W	RCM1	P53972	490 aa		5.55	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms