RNA–Protein interactions for RNA: YCR054C

CTR86, Transcript of Essential protein of unknown function, yeast

Gene CTR86, Length 1,692 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTR86	YCR054C	CYC1	P00044	109 aa	Predicted RBP	4.23	□□□□□ -1.73
CTR86	YCR054C	HIS5	P07172	385 aa		4.23	□□□□□ -1.73
CTR86	YCR054C	TUP1	P16649	713 aa		4.23	□□□□□ -1.73
CTR86	YCR054C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
CTR86	YCR054C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
CTR86	YCR054C	VPS34	P22543	875 aa		4.23	□□□□□ -1.73
CTR86	YCR054C	MGM1	P32266	881 aa		4.23	□□□□□ -1.73
CTR86	YCR054C	UBP13	P38187	747 aa		4.23	□□□□□ -1.73
CTR86	YCR054C	VID24	P38263	362 aa		4.23	□□□□□ -1.73
CTR86	YCR054C	EHT1	P38295	451 aa		4.23	□□□□□ -1.73
CTR86	YCR054C	SAF1	P38352	637 aa		4.23	□□□□□ -1.73
CTR86	YCR054C	STB5	P38699	743 aa		4.23	□□□□□ -1.73
CTR86	YCR054C	OTU2	P38747	307 aa	Known RBP	4.23	□□□□□ -1.73
CTR86	YCR054C	YEL057C	P39983	233 aa		4.23	□□□□□ -1.73
CTR86	YCR054C	ARB1	P40024	610 aa	Known RBP	4.23	□□□□□ -1.73
CTR86	YCR054C	CWC22	P53333	577 aa	Known RBP	4.23	□□□□□ -1.73
CTR86	YCR054C	TEX1	P53851	422 aa	Known RBP	4.23	□□□□□ -1.73
CTR86	YCR054C	GYL1	Q04322	720 aa		4.23	□□□□□ -1.73
CTR86	YCR054C	THI22	Q06490	572 aa		4.23	□□□□□ -1.73
CTR86	YCR054C	PEX19	Q07418	342 aa		4.23	□□□□□ -1.73
CTR86	YCR054C	ESC8	Q08119	714 aa		4.23	□□□□□ -1.73
CTR86	YCR054C	TRM11	Q12463	433 aa		4.23	□□□□□ -1.73
CTR86	YCR054C	YOL159C-A	Q3E769	90 aa		4.23	□□□□□ -1.73
CTR86	YCR054C	HRP1	Q99383	534 aa	Known RBP	4.23	□□□□□ -1.73
CTR86	YCR054C	KAR3	P17119	729 aa		4.22	□□□□□ -1.73
CTR86	YCR054C	CDC15	P27636	974 aa		4.22	□□□□□ -1.73
CTR86	YCR054C	PRE2	P30656	287 aa	Known RBP	4.22	□□□□□ -1.73
CTR86	YCR054C	AUR1	P36107	401 aa	Predicted RBP	4.22	□□□□□ -1.73
CTR86	YCR054C	COS111	P38308	924 aa		4.22	□□□□□ -1.73
CTR86	YCR054C	FTH1	P38310	465 aa		4.22	□□□□□ -1.73
CTR86	YCR054C	RPP1	P38786	293 aa		4.22	□□□□□ -1.73
CTR86	YCR054C	LRO1	P40345	661 aa		4.22	□□□□□ -1.73
CTR86	YCR054C	THI6	P41835	540 aa		4.22	□□□□□ -1.73
CTR86	YCR054C	COS12	P53053	380 aa		4.22	□□□□□ -1.73
CTR86	YCR054C	NCS6	P53088	359 aa		4.22	□□□□□ -1.73
CTR86	YCR054C	TAM41	P53230	385 aa		4.22	□□□□□ -1.73
CTR86	YCR054C	INN1	P53901	409 aa		4.22	□□□□□ -1.73
CTR86	YCR054C	ATG23	Q06671	453 aa		4.22	□□□□□ -1.73
CTR86	YCR054C	YEH1	Q07804	573 aa		4.22	□□□□□ -1.73
CTR86	YCR054C	SWT1	Q12104	458 aa		4.22	□□□□□ -1.73
CTR86	YCR054C	ERG6	P25087	383 aa	Known RBP	4.22	□□□□□ -1.73
CTR86	YCR054C	POL4	P25615	582 aa		4.22	□□□□□ -1.73
CTR86	YCR054C	YCR051W	P25631	222 aa		4.22	□□□□□ -1.73
CTR86	YCR054C	DSS4	P32601	143 aa		4.22	□□□□□ -1.73
CTR86	YCR054C	UIP5	P36137	443 aa		4.22	□□□□□ -1.73
CTR86	YCR054C	CST26	P38226	397 aa		4.22	□□□□□ -1.73
CTR86	YCR054C	YJL206C	P39529	758 aa		4.22	□□□□□ -1.73
CTR86	YCR054C	JHD1	P40034	492 aa		4.22	□□□□□ -1.73
CTR86	YCR054C	GET2	P40056	285 aa		4.22	□□□□□ -1.73
CTR86	YCR054C	ZIM17	P42844	174 aa		4.22	□□□□□ -1.73
CTR86	YCR054C	CHA4	P43634	648 aa		4.22	□□□□□ -1.73
CTR86	YCR054C	FYV8	P46949	817 aa	Known RBP	4.22	□□□□□ -1.73
CTR86	YCR054C	GCV2	P49095	1034 aa		4.22	□□□□□ -1.73
CTR86	YCR054C	NCS2	P53923	493 aa	Predicted RBP	4.22	□□□□□ -1.73
CTR86	YCR054C	YFT2	Q06676	274 aa		4.22	□□□□□ -1.73
CTR86	YCR054C	NFI1	Q12216	726 aa		4.22	□□□□□ -1.73
CTR86	YCR054C	AI1	P03875	834 aa		4.21	□□□□□ -1.74
CTR86	YCR054C	APE1	P14904	514 aa		4.21	□□□□□ -1.74
CTR86	YCR054C	GLK1	P17709	500 aa	Known RBP	4.21	□□□□□ -1.74
CTR86	YCR054C	RRP7	P25368	297 aa	Predicted RBP	4.21	□□□□□ -1.74
CTR86	YCR054C	PAP1	P29468	568 aa	Known RBP	4.21	□□□□□ -1.74
CTR86	YCR054C	MAL33	P38157	468 aa		4.21	□□□□□ -1.74
CTR86	YCR054C	ARR3	Q06598	404 aa		4.21	□□□□□ -1.74
CTR86	YCR054C	REX3	Q12090	404 aa		4.21	□□□□□ -1.74
CTR86	YCR054C	FRE6	Q12473	712 aa		4.21	□□□□□ -1.74
CTR86	YCR054C	PNO1	Q99216	274 aa	Known RBP	4.21	□□□□□ -1.74
CTR86	YCR054C	CET1	O13297	549 aa	Predicted RBP	4.2	□□□□□ -1.74
CTR86	YCR054C	STE12	P13574	688 aa		4.2	□□□□□ -1.74
CTR86	YCR054C	CLC1	P17891	233 aa		4.2	□□□□□ -1.74
CTR86	YCR054C	SUI2	P20459	304 aa	Known RBP	4.2	□□□□□ -1.74
CTR86	YCR054C	CPR2	P23285	205 aa		4.2	□□□□□ -1.74
CTR86	YCR054C	LRE1	P25579	583 aa	Known RBP	4.2	□□□□□ -1.74
CTR86	YCR054C	SPB1	P25582	841 aa	Predicted RBP	4.2	□□□□□ -1.74
CTR86	YCR054C	YCR015C	P25616	317 aa		4.2	□□□□□ -1.74
CTR86	YCR054C	YCR061W	P25639	631 aa		4.2	□□□□□ -1.74
CTR86	YCR054C	URK1	P27515	501 aa		4.2	□□□□□ -1.74
CTR86	YCR054C	AGP2	P38090	596 aa		4.2	□□□□□ -1.74
CTR86	YCR054C	POL12	P38121	705 aa	Predicted RBP	4.2	□□□□□ -1.74
CTR86	YCR054C	TIF4631	P39935	952 aa	Known RBP	4.2	□□□□□ -1.74
CTR86	YCR054C	PIG2	P40187	538 aa		4.2	□□□□□ -1.74
CTR86	YCR054C	YIL077C	P40508	320 aa		4.2	□□□□□ -1.74
CTR86	YCR054C	IME4	P41833	600 aa		4.2	□□□□□ -1.74
CTR86	YCR054C	GTF1	P53260	183 aa	Predicted RBP	4.2	□□□□□ -1.74
CTR86	YCR054C	BNI5	P53890	448 aa	Known RBP	4.2	□□□□□ -1.74
CTR86	YCR054C	YPL107W	Q02873	248 aa		4.2	□□□□□ -1.74
CTR86	YCR054C	YML037C	Q03703	340 aa		4.2	□□□□□ -1.74
CTR86	YCR054C	RSF1	Q05043	376 aa		4.2	□□□□□ -1.74
CTR86	YCR054C	HOF1	Q05080	669 aa		4.2	□□□□□ -1.74
CTR86	YCR054C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
CTR86	YCR054C	YOR352W	Q08816	343 aa		4.2	□□□□□ -1.74
CTR86	YCR054C	FRE5	Q08908	694 aa		4.2	□□□□□ -1.74
CTR86	YCR054C	ATG29	Q12092	213 aa		4.2	□□□□□ -1.74
CTR86	YCR054C	YPT6	Q99260	215 aa		4.2	□□□□□ -1.74
CTR86	YCR054C	YBR085C-A	O43137	85 aa		4.19	□□□□□ -1.74
CTR86	YCR054C	PRP28	P23394	588 aa		4.19	□□□□□ -1.74
CTR86	YCR054C	FEN2	P25621	512 aa	Known RBP	4.19	□□□□□ -1.74
CTR86	YCR054C	URA7	P28274	579 aa	Known RBP	4.19	□□□□□ -1.74
CTR86	YCR054C	COQ2	P32378	372 aa		4.19	□□□□□ -1.74
CTR86	YCR054C	SMI1	P32566	505 aa		4.19	□□□□□ -1.74
CTR86	YCR054C	SRB5	P32585	307 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 43.4 ms