RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 FUT2Q10981 343 aa19.57■□□□□ 0.72
PHGDH-229ENST00000641891 GRIK5Q16478 980 aa19.57■□□□□ 0.72
PHGDH-229ENST00000641891 CCDC144BQ3MJ40 725 aa19.57■□□□□ 0.72
PHGDH-229ENST00000641891 SPECC1Q5M775 1068 aa19.57■□□□□ 0.72
PHGDH-229ENST00000641891 ISM2Q6H9L7 571 aa19.57■□□□□ 0.72
PHGDH-229ENST00000641891 CATIPQ7Z7H3 387 aa19.57■□□□□ 0.72
PHGDH-229ENST00000641891 IQCA1Q86XH1 822 aa19.57■□□□□ 0.72
PHGDH-229ENST00000641891 FOXP1Q9H334 677 aaPredicted RBP19.57■□□□□ 0.72
PHGDH-229ENST00000641891 VPS54Q9P1Q0 977 aa19.57■□□□□ 0.72
PHGDH-229ENST00000641891 GRIN1Q05586 938 aa19.56■□□□□ 0.72
PHGDH-229ENST00000641891 PKN1Q16512 942 aa19.56■□□□□ 0.72
PHGDH-229ENST00000641891 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.56■□□□□ 0.72
PHGDH-229ENST00000641891 SPTLC3Q9NUV7 552 aa19.56■□□□□ 0.72
PHGDH-229ENST00000641891 CUTAO60888 179 aa19.56■□□□□ 0.72
PHGDH-229ENST00000641891 TPM2P07951 284 aa19.56■□□□□ 0.72
PHGDH-229ENST00000641891 TROAPQ12815 778 aa19.56■□□□□ 0.72
PHGDH-229ENST00000641891 DNTTIP2Q5QJE6 756 aaKnown RBP19.56■□□□□ 0.72
PHGDH-229ENST00000641891 PRR5LQ6MZQ0 368 aa19.56■□□□□ 0.72
PHGDH-229ENST00000641891 RNF26Q9BY78 433 aaPredicted RBP19.56■□□□□ 0.72
PHGDH-229ENST00000641891 ATP8A2Q9NTI2 1148 aa19.56■□□□□ 0.72
PHGDH-229ENST00000641891 PCDHB6Q9Y5E3 794 aa19.56■□□□□ 0.72
PHGDH-229ENST00000641891 FAM205CA6NFA0 338 aa19.55■□□□□ 0.72
PHGDH-229ENST00000641891 USP17L8P0C7I0 530 aa19.55■□□□□ 0.72
PHGDH-229ENST00000641891 ATP2B1P20020 1258 aa19.55■□□□□ 0.72
PHGDH-229ENST00000641891 ZRSR1Q15695 479 aaKnown RBP19.55■□□□□ 0.72
PHGDH-229ENST00000641891 NAT10Q9H0A0 1025 aaKnown RBP19.55■□□□□ 0.72
PHGDH-229ENST00000641891 FAM237AA0A1B0GTK4 181 aa19.54■□□□□ 0.72
PHGDH-229ENST00000641891 PCP11498 1178 aaKnown RBP19.54■□□□□ 0.72
PHGDH-229ENST00000641891 CDC25BP30305 580 aa19.54■□□□□ 0.72
PHGDH-229ENST00000641891 NLRP12P59046 1061 aa19.54■□□□□ 0.72
PHGDH-229ENST00000641891 KRI1Q8N9T8 703 aaKnown RBP19.54■□□□□ 0.72
PHGDH-229ENST00000641891 ORC4O43929 436 aa19.54■□□□□ 0.72
PHGDH-229ENST00000641891 AKAP17AQ02040 695 aaKnown RBP19.54■□□□□ 0.72
PHGDH-229ENST00000641891 PNOCQ13519 176 aa19.54■□□□□ 0.72
PHGDH-229ENST00000641891 TIGD1Q96MW7 591 aa19.54■□□□□ 0.72
PHGDH-229ENST00000641891 MCM9Q9NXL9 1143 aa19.54■□□□□ 0.72
PHGDH-229ENST00000641891 V9GY48 417 aaPredicted RBP19.54■□□□□ 0.72
PHGDH-229ENST00000641891 EP400Q96L91 3159 aa19.53■□□□□ 0.72
PHGDH-229ENST00000641891 DIXDC1Q155Q3 683 aa19.53■□□□□ 0.72
PHGDH-229ENST00000641891 LONRF3Q496Y0 759 aa19.53■□□□□ 0.72
PHGDH-229ENST00000641891 BCL11BQ9C0K0 894 aaPredicted RBP19.53■□□□□ 0.72
PHGDH-229ENST00000641891 CABP5Q9NP86 173 aa19.53■□□□□ 0.72
PHGDH-229ENST00000641891 ARPP21Q9UBL0 812 aaPredicted RBP19.53■□□□□ 0.72
PHGDH-229ENST00000641891 FBXO2Q9UK22 296 aaPredicted RBP19.53■□□□□ 0.72
PHGDH-229ENST00000641891 LEMD3Q9Y2U8 911 aa19.53■□□□□ 0.72
PHGDH-229ENST00000641891 XDHP47989 1333 aa19.53■□□□□ 0.72
PHGDH-229ENST00000641891 LDHBP07195 334 aaKnown RBP19.53■□□□□ 0.72
PHGDH-229ENST00000641891 GPSM2P81274 684 aa19.53■□□□□ 0.72
PHGDH-229ENST00000641891 EARS2Q5JPH6 523 aaKnown RBP19.53■□□□□ 0.72
PHGDH-229ENST00000641891 SPTY2D1Q68D10 685 aaPredicted RBP19.53■□□□□ 0.72
PHGDH-229ENST00000641891 SH3RF3Q8TEJ3 882 aaPredicted RBP19.53■□□□□ 0.72
PHGDH-229ENST00000641891 MRFAP1L1Q96HT8 127 aa19.53■□□□□ 0.72
PHGDH-229ENST00000641891 KCNH3Q9ULD8 1083 aa19.53■□□□□ 0.72
PHGDH-229ENST00000641891 UBR3Q6ZT12 1888 aa19.52■□□□□ 0.72
PHGDH-229ENST00000641891 PRPF3O43395 683 aaKnown RBP19.52■□□□□ 0.72
PHGDH-229ENST00000641891 ONECUT3O60422 494 aaPredicted RBP19.52■□□□□ 0.72
PHGDH-229ENST00000641891 GYS1P13807 737 aa19.52■□□□□ 0.72
PHGDH-229ENST00000641891 TERF1P54274 439 aa19.52■□□□□ 0.72
PHGDH-229ENST00000641891 RBM6P78332 1123 aaKnown RBP19.52■□□□□ 0.72
PHGDH-229ENST00000641891 PPP2R5BQ15173 497 aa19.52■□□□□ 0.72
PHGDH-229ENST00000641891 SBK1Q52WX2 424 aa19.52■□□□□ 0.72
PHGDH-229ENST00000641891 RILPL1Q5EBL4 403 aa19.52■□□□□ 0.72
PHGDH-229ENST00000641891 METTL16Q86W50 562 aaKnown RBP19.52■□□□□ 0.72
PHGDH-229ENST00000641891 CACTINQ8WUQ7 758 aaKnown RBP19.52■□□□□ 0.72
PHGDH-229ENST00000641891 DDAH1O94760 285 aa19.51■□□□□ 0.71
PHGDH-229ENST00000641891 ARID5BQ14865 1188 aa19.51■□□□□ 0.71
PHGDH-229ENST00000641891 TMTC3Q6ZXV5 915 aa19.51■□□□□ 0.71
PHGDH-229ENST00000641891 RPGRQ92834 1020 aaKnown RBP19.51■□□□□ 0.71
PHGDH-229ENST00000641891 PHF20Q9BVI0 1012 aa19.51■□□□□ 0.71
PHGDH-229ENST00000641891 RBM28Q9NW13 759 aaKnown RBP19.51■□□□□ 0.71
PHGDH-229ENST00000641891 CNTNAP5Q8WYK1 1306 aa19.51■□□□□ 0.71
PHGDH-229ENST00000641891 UQCRHLA0A096LP55 91 aa19.51■□□□□ 0.71
PHGDH-229ENST00000641891 FOXN1O15353 648 aa19.51■□□□□ 0.71
PHGDH-229ENST00000641891 UQCRHP07919 91 aa19.51■□□□□ 0.71
PHGDH-229ENST00000641891 HSPA1LP34931 641 aa19.51■□□□□ 0.71
PHGDH-229ENST00000641891 SRBD1Q8N5C6 995 aaKnown RBP19.51■□□□□ 0.71
PHGDH-229ENST00000641891 DYNLL2Q96FJ2 89 aa19.51■□□□□ 0.71
PHGDH-229ENST00000641891 BPIFA3Q9BQP9 254 aa19.51■□□□□ 0.71
PHGDH-229ENST00000641891 TUBE1Q9UJT0 475 aa19.51■□□□□ 0.71
PHGDH-229ENST00000641891 TSPY2A6NKD2 308 aa19.5■□□□□ 0.71
PHGDH-229ENST00000641891 CALM1P0DP23 149 aa19.5■□□□□ 0.71
PHGDH-229ENST00000641891 CALM2P0DP24 149 aa19.5■□□□□ 0.71
PHGDH-229ENST00000641891 CALM3P0DP25 149 aa19.5■□□□□ 0.71
PHGDH-229ENST00000641891 PTPREP23469 700 aa19.5■□□□□ 0.71
PHGDH-229ENST00000641891 USP5P45974 858 aa19.5■□□□□ 0.71
PHGDH-229ENST00000641891 NOM1Q5C9Z4 860 aaKnown RBP19.5■□□□□ 0.71
PHGDH-229ENST00000641891 KRBA2Q6ZNG9 492 aa19.5■□□□□ 0.71
PHGDH-229ENST00000641891 WDR66Q8TBY9 1149 aa19.5■□□□□ 0.71
PHGDH-229ENST00000641891 PDE4BQ07343 736 aa19.5■□□□□ 0.71
PHGDH-229ENST00000641891 ZNF804AQ7Z570 1209 aa19.5■□□□□ 0.71
PHGDH-229ENST00000641891 CNNM3Q8NE01 707 aa19.5■□□□□ 0.71
PHGDH-229ENST00000641891 MKRN1Q9UHC7 482 aaKnown RBP19.5■□□□□ 0.71
PHGDH-229ENST00000641891 WNT7AO00755 349 aa19.49■□□□□ 0.71
PHGDH-229ENST00000641891 UFL1O94874 794 aa19.49■□□□□ 0.71
PHGDH-229ENST00000641891 SERPINB2P05120 415 aa19.49■□□□□ 0.71
PHGDH-229ENST00000641891 ADRA2BP18089 450 aa19.49■□□□□ 0.71
PHGDH-229ENST00000641891 KRT2P35908 639 aa19.49■□□□□ 0.71
PHGDH-229ENST00000641891 NCAPHQ15003 741 aa19.49■□□□□ 0.71
PHGDH-229ENST00000641891 RCSD1Q6JBY9 416 aa19.49■□□□□ 0.71
PHGDH-229ENST00000641891 FOXP4Q8IVH2 680 aaPredicted RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms