RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 RASSF4Q9H2L5 321 aa6.93□□□□□ -1.3
CASC19-260ENST00000641828 ELP3Q9H9T3 547 aa6.93□□□□□ -1.3
CASC19-260ENST00000641828 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.93□□□□□ -1.3
CASC19-260ENST00000641828 WDR33Q9C0J8 1336 aaKnown RBP6.93□□□□□ -1.3
CASC19-260ENST00000641828 PTPRUQ92729 1446 aa6.92□□□□□ -1.3
CASC19-260ENST00000641828 SPINT1O43278 529 aa6.92□□□□□ -1.3
CASC19-260ENST00000641828 HTATSF1O43719 755 aaKnown RBP6.92□□□□□ -1.3
CASC19-260ENST00000641828 GADD45BO75293 160 aaPredicted RBP6.92□□□□□ -1.3
CASC19-260ENST00000641828 TRIM37O94972 964 aa6.92□□□□□ -1.3
CASC19-260ENST00000641828 ST13P50502 369 aaKnown RBP6.92□□□□□ -1.3
CASC19-260ENST00000641828 UBE2HP62256 183 aa6.92□□□□□ -1.3
CASC19-260ENST00000641828 COL13A1Q5TAT6 717 aaPredicted RBP6.92□□□□□ -1.3
CASC19-260ENST00000641828 CERS3Q8IU89 383 aa6.92□□□□□ -1.3
CASC19-260ENST00000641828 ARHGAP45Q92619 1136 aa6.92□□□□□ -1.3
CASC19-260ENST00000641828 CHAMP1Q96JM3 812 aa6.92□□□□□ -1.3
CASC19-260ENST00000641828 FUCA2Q9BTY2 467 aa6.92□□□□□ -1.3
CASC19-260ENST00000641828 SRCIN1Q9C0H9 1055 aa6.92□□□□□ -1.3
CASC19-260ENST00000641828 NEUROD4Q9HD90 331 aa6.92□□□□□ -1.3
CASC19-260ENST00000641828 SLC52A1Q9NWF4 448 aa6.92□□□□□ -1.3
CASC19-260ENST00000641828 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.92□□□□□ -1.3
CASC19-260ENST00000641828 DUOX2Q9NRD8 1548 aa6.92□□□□□ -1.3
CASC19-260ENST00000641828 PLCH1Q4KWH8 1693 aa6.92□□□□□ -1.3
CASC19-260ENST00000641828 CTSOP43234 321 aaPredicted RBP6.91□□□□□ -1.3
CASC19-260ENST00000641828 CYP4X1Q8N118 509 aa6.91□□□□□ -1.3
CASC19-260ENST00000641828 TXLNBQ8N3L3 684 aa6.91□□□□□ -1.3
CASC19-260ENST00000641828 TSR2Q969E8 191 aaKnown RBP6.91□□□□□ -1.3
CASC19-260ENST00000641828 ERO1AQ96HE7 468 aa6.91□□□□□ -1.3
CASC19-260ENST00000641828 C16orf45Q96MC5 204 aaPredicted RBP6.91□□□□□ -1.3
CASC19-260ENST00000641828 IFT57Q9NWB7 429 aa6.91□□□□□ -1.3
CASC19-260ENST00000641828 POLR3DP05423 398 aaPredicted RBP6.91□□□□□ -1.3
CASC19-260ENST00000641828 NOP2P46087 812 aaKnown RBP6.91□□□□□ -1.3
CASC19-260ENST00000641828 NEK4P51957 841 aa6.91□□□□□ -1.3
CASC19-260ENST00000641828 POU4F2Q12837 409 aa6.91□□□□□ -1.3
CASC19-260ENST00000641828 GPR162Q16538 588 aa6.91□□□□□ -1.3
CASC19-260ENST00000641828 CEP135Q66GS9 1140 aa6.91□□□□□ -1.3
CASC19-260ENST00000641828 NXPE4Q6UWF7 544 aa6.91□□□□□ -1.3
CASC19-260ENST00000641828 LRRC69Q6ZNQ3 347 aa6.91□□□□□ -1.3
CASC19-260ENST00000641828 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.91□□□□□ -1.3
CASC19-260ENST00000641828 NOP9Q86U38 636 aaKnown RBP6.91□□□□□ -1.3
CASC19-260ENST00000641828 VPS37DQ86XT2 251 aa6.91□□□□□ -1.3
CASC19-260ENST00000641828 LINC00528Q8N1L1 170 aa6.91□□□□□ -1.3
CASC19-260ENST00000641828 SPC24Q8NBT2 197 aa6.91□□□□□ -1.3
CASC19-260ENST00000641828 SYT17Q9BSW7 474 aa6.91□□□□□ -1.3
CASC19-260ENST00000641828 BRMS1Q9HCU9 246 aa6.91□□□□□ -1.3
CASC19-260ENST00000641828 RSPH14Q9UHP6 348 aa6.91□□□□□ -1.3
CASC19-260ENST00000641828 HDAC5Q9UQL6 1122 aa6.91□□□□□ -1.3
CASC19-260ENST00000641828 RAD50Q92878 1312 aa6.91□□□□□ -1.3
CASC19-260ENST00000641828 XRN1Q8IZH2 1706 aaKnown RBP6.91□□□□□ -1.3
CASC19-260ENST00000641828 NWD2Q9ULI1 1742 aa6.91□□□□□ -1.3
CASC19-260ENST00000641828 ERC2O15083 957 aa6.9□□□□□ -1.3
CASC19-260ENST00000641828 CCDC192P0DO97 292 aa6.9□□□□□ -1.3
CASC19-260ENST00000641828 SMPD1P17405 629 aa6.9□□□□□ -1.3
CASC19-260ENST00000641828 GTF2A1P52655 376 aaPredicted RBP6.9□□□□□ -1.3
CASC19-260ENST00000641828 TPD52L1Q16890 204 aaPredicted RBP6.9□□□□□ -1.3
CASC19-260ENST00000641828 ARSJQ5FYB0 599 aaPredicted RBP6.9□□□□□ -1.3
CASC19-260ENST00000641828 ZIC5Q96T25 663 aa6.9□□□□□ -1.3
CASC19-260ENST00000641828 BCO2Q9BYV7 579 aa6.9□□□□□ -1.3
CASC19-260ENST00000641828 CWC15Q9P013 229 aaKnown RBP6.9□□□□□ -1.3
CASC19-260ENST00000641828 SHANK3Q9BYB0 1731 aa6.9□□□□□ -1.31
CASC19-260ENST00000641828 USP32Q8NFA0 1604 aa6.9□□□□□ -1.31
CASC19-260ENST00000641828 DLC1Q96QB1 1528 aa6.9□□□□□ -1.31
CASC19-260ENST00000641828 CCDC171Q6TFL3 1326 aa6.89□□□□□ -1.31
CASC19-260ENST00000641828 NPHP3Q7Z494 1330 aa6.89□□□□□ -1.31
CASC19-260ENST00000641828 AP5Z1O43299 807 aa6.89□□□□□ -1.31
CASC19-260ENST00000641828 DHX16O60231 1041 aaKnown RBP6.89□□□□□ -1.31
CASC19-260ENST00000641828 GDF9O60383 454 aa6.89□□□□□ -1.31
CASC19-260ENST00000641828 EPB42P16452 691 aa6.89□□□□□ -1.31
CASC19-260ENST00000641828 PTGS1P23219 599 aa6.89□□□□□ -1.31
CASC19-260ENST00000641828 MTHFSP49914 203 aa6.89□□□□□ -1.31
CASC19-260ENST00000641828 ANAPC15P60006 121 aa6.89□□□□□ -1.31
CASC19-260ENST00000641828 TPM4P67936 248 aa6.89□□□□□ -1.31
CASC19-260ENST00000641828 GPS2Q13227 327 aa6.89□□□□□ -1.31
CASC19-260ENST00000641828 CCDC144BQ3MJ40 725 aa6.89□□□□□ -1.31
CASC19-260ENST00000641828 FBXO38Q6PIJ6 1188 aa6.89□□□□□ -1.31
CASC19-260ENST00000641828 ERMP1Q7Z2K6 904 aa6.89□□□□□ -1.31
CASC19-260ENST00000641828 PRICKLE2Q7Z3G6 844 aa6.89□□□□□ -1.31
CASC19-260ENST00000641828 SIRT2Q8IXJ6 389 aa6.89□□□□□ -1.31
CASC19-260ENST00000641828 CHRDQ9H2X0 955 aa6.89□□□□□ -1.31
CASC19-260ENST00000641828 DCTPP1Q9H773 170 aa6.89□□□□□ -1.31
CASC19-260ENST00000641828 TOR4AQ9NXH8 423 aa6.89□□□□□ -1.31
CASC19-260ENST00000641828 ATP6V1DQ9Y5K8 247 aa6.89□□□□□ -1.31
CASC19-260ENST00000641828 V9GY48 417 aaPredicted RBP6.89□□□□□ -1.31
CASC19-260ENST00000641828 EREGO14944 169 aa6.89□□□□□ -1.31
CASC19-260ENST00000641828 NEMFO60524 1076 aa6.89□□□□□ -1.31
CASC19-260ENST00000641828 UPP2O95045 317 aa6.89□□□□□ -1.31
CASC19-260ENST00000641828 U2AF1L5P0DN76 240 aaPredicted RBP6.89□□□□□ -1.31
CASC19-260ENST00000641828 GRNP28799 593 aaKnown RBP6.89□□□□□ -1.31
CASC19-260ENST00000641828 TMPOP42166 694 aaKnown RBP6.89□□□□□ -1.31
CASC19-260ENST00000641828 GJA8P48165 433 aa6.89□□□□□ -1.31
CASC19-260ENST00000641828 U2AF1Q01081 240 aaKnown RBP eCLIP6.89□□□□□ -1.311e-15■■■□□ 14.9
CASC19-260ENST00000641828 RBL2Q08999 1139 aa6.89□□□□□ -1.31
CASC19-260ENST00000641828 ICE2Q659A1 982 aa6.89□□□□□ -1.31
CASC19-260ENST00000641828 CCDC186Q7Z3E2 898 aa6.89□□□□□ -1.31
CASC19-260ENST00000641828 MCF2L2Q86YR7 1114 aa6.89□□□□□ -1.31
CASC19-260ENST00000641828 GALNT12Q8IXK2 581 aa6.89□□□□□ -1.31
CASC19-260ENST00000641828 GOLGA6L1Q8N7Z2 621 aa6.89□□□□□ -1.31
CASC19-260ENST00000641828 ZNF622Q969S3 477 aaKnown RBP eCLIP6.89□□□□□ -1.31
CASC19-260ENST00000641828 TRERF1Q96PN7 1200 aa6.89□□□□□ -1.31
CASC19-260ENST00000641828 ZNF215Q9UL58 517 aaPredicted RBP6.89□□□□□ -1.31
CASC19-260ENST00000641828 V9GYY5 206 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms