RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 GADL1Q6ZQY3 521 aa20.81■□□□□ 0.92
PHGDH-227ENST00000641811 ANKRD23Q86SG2 305 aa20.81■□□□□ 0.92
PHGDH-227ENST00000641811 EVI5LQ96CN4 794 aa20.81■□□□□ 0.92
PHGDH-227ENST00000641811 DYNLL2Q96FJ2 89 aa20.81■□□□□ 0.92
PHGDH-227ENST00000641811 ZBTB21Q9ULJ3 1066 aa20.81■□□□□ 0.92
PHGDH-227ENST00000641811 BAZ2AQ9UIF9 1905 aaKnown RBP20.8■□□□□ 0.92
PHGDH-227ENST00000641811 GSG1L2A8MUP6 293 aa20.8■□□□□ 0.92
PHGDH-227ENST00000641811 PDHXO00330 501 aa20.8■□□□□ 0.92
PHGDH-227ENST00000641811 FKTNO75072 461 aa20.8■□□□□ 0.92
PHGDH-227ENST00000641811 GH2P01242 217 aa20.8■□□□□ 0.92
PHGDH-227ENST00000641811 ASNSP08243 561 aa20.8■□□□□ 0.92
PHGDH-227ENST00000641811 NOM1Q5C9Z4 860 aaKnown RBP20.8■□□□□ 0.92
PHGDH-227ENST00000641811 ZMYM1Q5SVZ6 1142 aa20.8■□□□□ 0.92
PHGDH-227ENST00000641811 SLC44A5Q8NCS7 719 aa20.8■□□□□ 0.92
PHGDH-227ENST00000641811 ZNF280CQ8ND82 737 aa20.8■□□□□ 0.92
PHGDH-227ENST00000641811 ZFYVE28Q9HCC9 887 aa20.8■□□□□ 0.92
PHGDH-227ENST00000641811 PDE4AP27815 886 aa20.79■□□□□ 0.92
PHGDH-227ENST00000641811 DGKZQ13574 1117 aa20.79■□□□□ 0.92
PHGDH-227ENST00000641811 CERKLQ49MI3 558 aaPredicted RBP20.79■□□□□ 0.92
PHGDH-227ENST00000641811 C12orf60Q5U649 245 aa20.79■□□□□ 0.92
PHGDH-227ENST00000641811 CTR9Q6PD62 1173 aa20.79■□□□□ 0.92
PHGDH-227ENST00000641811 OSBPL3Q9H4L5 887 aa20.79■□□□□ 0.92
PHGDH-227ENST00000641811 TRIM6-TRIM34B2RNG4 842 aa20.78■□□□□ 0.92
PHGDH-227ENST00000641811 FASTKD5Q7L8L6 764 aaKnown RBP20.78■□□□□ 0.92
PHGDH-227ENST00000641811 RILPL2Q969X0 211 aa20.78■□□□□ 0.92
PHGDH-227ENST00000641811 DDRGK1Q96HY6 314 aa20.78■□□□□ 0.92
PHGDH-227ENST00000641811 MCOLN1Q9GZU1 580 aa20.78■□□□□ 0.92
PHGDH-227ENST00000641811 ZCCHC17Q9NP64 241 aaKnown RBP20.78■□□□□ 0.92
PHGDH-227ENST00000641811 HMGCS2P54868 508 aa20.77■□□□□ 0.92
PHGDH-227ENST00000641811 ABCB5Q2M3G0 1257 aa20.77■□□□□ 0.92
PHGDH-227ENST00000641811 CCDC129Q6ZRS4 1044 aa20.77■□□□□ 0.92
PHGDH-227ENST00000641811 WDR18Q9BV38 432 aa20.77■□□□□ 0.92
PHGDH-227ENST00000641811 AS3MTQ9HBK9 375 aa20.77■□□□□ 0.92
PHGDH-227ENST00000641811 EPB41L4AQ9HCS5 686 aaPredicted RBP20.77■□□□□ 0.92
PHGDH-227ENST00000641811 GINM1Q9NU53 330 aa20.77■□□□□ 0.92
PHGDH-227ENST00000641811 PTPRFP10586 1907 aa20.76■□□□□ 0.91
PHGDH-227ENST00000641811 APPP05067 770 aa20.76■□□□□ 0.91
PHGDH-227ENST00000641811 MTMR2Q13614 643 aa20.76■□□□□ 0.91
PHGDH-227ENST00000641811 TREML2Q5T2D2 321 aa20.76■□□□□ 0.91
PHGDH-227ENST00000641811 CTU1Q7Z7A3 348 aaKnown RBP20.76■□□□□ 0.91
PHGDH-227ENST00000641811 TBC1D2Q9BYX2 928 aa20.76■□□□□ 0.91
PHGDH-227ENST00000641811 TLR2O60603 784 aa20.75■□□□□ 0.91
PHGDH-227ENST00000641811 CYP2C8P10632 490 aa20.75■□□□□ 0.91
PHGDH-227ENST00000641811 GNAT2P19087 354 aa20.75■□□□□ 0.91
PHGDH-227ENST00000641811 CAP1Q01518 475 aa20.75■□□□□ 0.91
PHGDH-227ENST00000641811 SP3Q02447 781 aa20.75■□□□□ 0.91
PHGDH-227ENST00000641811 RAB3GAP1Q15042 981 aa20.75■□□□□ 0.91
PHGDH-227ENST00000641811 AMOTL1Q8IY63 956 aa20.75■□□□□ 0.91
PHGDH-227ENST00000641811 CD99L2Q8TCZ2 262 aa20.75■□□□□ 0.91
PHGDH-227ENST00000641811 FAM227BQ96M60 508 aa20.75■□□□□ 0.91
PHGDH-227ENST00000641811 MINDY4BA8MYZ0 360 aa20.74■□□□□ 0.91
PHGDH-227ENST00000641811 PATL2C9JE40 543 aaKnown RBP20.74■□□□□ 0.91
PHGDH-227ENST00000641811 MPHOSPH10O00566 681 aaKnown RBP20.74■□□□□ 0.91
PHGDH-227ENST00000641811 GUCY1A2P33402 732 aa20.74■□□□□ 0.91
PHGDH-227ENST00000641811 CDK8P49336 464 aa20.74■□□□□ 0.91
PHGDH-227ENST00000641811 BACE1P56817 501 aa20.74■□□□□ 0.91
PHGDH-227ENST00000641811 GIMAP6Q6P9H5 292 aa20.74■□□□□ 0.91
PHGDH-227ENST00000641811 STK11IPQ8N1F8 1099 aa20.74■□□□□ 0.91
PHGDH-227ENST00000641811 CABP5Q9NP86 173 aa20.74■□□□□ 0.91
PHGDH-227ENST00000641811 ARPP21Q9UBL0 812 aaPredicted RBP20.74■□□□□ 0.91
PHGDH-227ENST00000641811 SWAP70Q9UH65 585 aa20.74■□□□□ 0.91
PHGDH-227ENST00000641811 CPA4Q9UI42 421 aa20.74■□□□□ 0.91
PHGDH-227ENST00000641811 AGTPBP1Q9UPW5 1226 aa20.74■□□□□ 0.91
PHGDH-227ENST00000641811 A0A0D9SFI3 127 aa20.73■□□□□ 0.91
PHGDH-227ENST00000641811 TDO2P48775 406 aa20.73■□□□□ 0.91
PHGDH-227ENST00000641811 NMIQ13287 307 aaPredicted RBP20.73■□□□□ 0.91
PHGDH-227ENST00000641811 SEPT2Q15019 361 aa20.73■□□□□ 0.91
PHGDH-227ENST00000641811 SBK1Q52WX2 424 aa20.73■□□□□ 0.91
PHGDH-227ENST00000641811 SH3D19Q5HYK7 790 aa20.73■□□□□ 0.91
PHGDH-227ENST00000641811 C16orf86Q6ZW13 317 aa20.73■□□□□ 0.91
PHGDH-227ENST00000641811 IFNL3Q8IZI9 196 aa20.73■□□□□ 0.91
PHGDH-227ENST00000641811 PROCA1Q8NCQ7 364 aaPredicted RBP20.73■□□□□ 0.91
PHGDH-227ENST00000641811 ABHD8Q96I13 439 aa20.73■□□□□ 0.91
PHGDH-227ENST00000641811 ADGRA2Q96PE1 1338 aa20.73■□□□□ 0.91
PHGDH-227ENST00000641811 USP17L10C9JJH3 530 aa20.72■□□□□ 0.91
PHGDH-227ENST00000641811 FOXP2O15409 715 aa20.72■□□□□ 0.91
PHGDH-227ENST00000641811 CAPN15O75808 1086 aa20.72■□□□□ 0.91
PHGDH-227ENST00000641811 AKR1B1P15121 316 aa20.72■□□□□ 0.91
PHGDH-227ENST00000641811 ZYXQ15942 572 aaKnown RBP20.72■□□□□ 0.91
PHGDH-227ENST00000641811 IFFO2Q5TF58 517 aa20.72■□□□□ 0.91
PHGDH-227ENST00000641811 C17orf99Q6UX52 265 aa20.72■□□□□ 0.91
PHGDH-227ENST00000641811 ACER1Q8TDN7 264 aa20.72■□□□□ 0.91
PHGDH-227ENST00000641811 PARK7Q99497 189 aaKnown RBP20.72■□□□□ 0.91
PHGDH-227ENST00000641811 HELLSQ9NRZ9 838 aa20.72■□□□□ 0.91
PHGDH-227ENST00000641811 ECM2O94769 699 aaPredicted RBP20.71■□□□□ 0.91
PHGDH-227ENST00000641811 VPS53Q5VIR6 699 aa20.71■□□□□ 0.91
PHGDH-227ENST00000641811 ERO1AQ96HE7 468 aa20.71■□□□□ 0.91
PHGDH-227ENST00000641811 SLC45A1Q9Y2W3 748 aa20.71■□□□□ 0.91
PHGDH-227ENST00000641811 LOC285556D6RIA3 1793 aa20.7■□□□□ 0.9
PHGDH-227ENST00000641811 C19orf81C9J6K1 198 aa20.7■□□□□ 0.9
PHGDH-227ENST00000641811 SDSP20132 328 aa20.7■□□□□ 0.9
PHGDH-227ENST00000641811 CLEC10AQ8IUN9 316 aa20.7■□□□□ 0.9
PHGDH-227ENST00000641811 NACAP1Q9BZK3 213 aa20.7■□□□□ 0.9
PHGDH-227ENST00000641811 ARHGAP39Q9C0H5 1083 aa20.7■□□□□ 0.9
PHGDH-227ENST00000641811 EMILIN3Q9NT22 766 aa20.7■□□□□ 0.9
PHGDH-227ENST00000641811 TMOD4Q9NZQ9 345 aa20.7■□□□□ 0.9
PHGDH-227ENST00000641811 TRIM17Q9Y577 477 aa20.7■□□□□ 0.9
PHGDH-227ENST00000641811 GSPT1P15170 499 aaKnown RBP20.69■□□□□ 0.9
PHGDH-227ENST00000641811 MCMDC2Q4G0Z9 681 aa20.69■□□□□ 0.9
PHGDH-227ENST00000641811 OTOP1Q7RTM1 612 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms