RNA–Protein interactions for RNA: ENST00000641642.1

CASC19-247, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,107 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-247ENST00000641642 TEX11Q8IYF3 940 aa12.33□□□□□ -0.44
CASC19-247ENST00000641642 LCORLQ8N3X6 602 aa12.33□□□□□ -0.44
CASC19-247ENST00000641642 IL27Q8NEV9 243 aa12.33□□□□□ -0.44
CASC19-247ENST00000641642 LSG1Q9H089 658 aaKnown RBP12.33□□□□□ -0.44
CASC19-247ENST00000641642 ARMT1Q9H993 441 aa12.33□□□□□ -0.44
CASC19-247ENST00000641642 ANO2Q9NQ90 1003 aa12.33□□□□□ -0.44
CASC19-247ENST00000641642 USP40Q9NVE5 1235 aa12.33□□□□□ -0.44
CASC19-247ENST00000641642 SLC4A4Q9Y6R1 1079 aa12.33□□□□□ -0.44
CASC19-247ENST00000641642 PITPNM2Q9BZ72 1349 aa12.33□□□□□ -0.44
CASC19-247ENST00000641642 GSG1L2A8MUP6 293 aa12.32□□□□□ -0.44
CASC19-247ENST00000641642 CHGBP05060 677 aa12.32□□□□□ -0.44
CASC19-247ENST00000641642 TNNI2P48788 182 aa12.32□□□□□ -0.44
CASC19-247ENST00000641642 DYNLL1P63167 89 aaKnown RBP12.32□□□□□ -0.44
CASC19-247ENST00000641642 SLFNL1Q499Z3 407 aa12.32□□□□□ -0.44
CASC19-247ENST00000641642 SBK1Q52WX2 424 aa12.32□□□□□ -0.44
CASC19-247ENST00000641642 RNF20Q5VTR2 975 aa12.32□□□□□ -0.44
CASC19-247ENST00000641642 IFNL3Q8IZI9 196 aa12.32□□□□□ -0.44
CASC19-247ENST00000641642 DHX36Q9H2U1 1008 aaKnown RBP12.32□□□□□ -0.44
CASC19-247ENST00000641642 IL21Q9HBE4 155 aa12.32□□□□□ -0.44
CASC19-247ENST00000641642 MKRN1Q9UHC7 482 aaKnown RBP12.32□□□□□ -0.44
CASC19-247ENST00000641642 UTRNP46939 3433 aa12.32□□□□□ -0.44
CASC19-247ENST00000641642 COL2A1P02458 1487 aaPredicted RBP12.32□□□□□ -0.44
CASC19-247ENST00000641642 FOCADQ5VW36 1801 aa12.32□□□□□ -0.44
CASC19-247ENST00000641642 WDHD1O75717 1129 aaPredicted RBP12.31□□□□□ -0.44
CASC19-247ENST00000641642 APPP05067 770 aa12.31□□□□□ -0.44
CASC19-247ENST00000641642 PCP11498 1178 aaKnown RBP12.31□□□□□ -0.44
CASC19-247ENST00000641642 VEGFAP15692 232 aaPredicted RBP12.31□□□□□ -0.44
CASC19-247ENST00000641642 MCCP23508 829 aa12.31□□□□□ -0.44
CASC19-247ENST00000641642 EPHX2P34913 555 aa12.31□□□□□ -0.44
CASC19-247ENST00000641642 EPS15P42566 896 aa12.31□□□□□ -0.44
CASC19-247ENST00000641642 USP5P45974 858 aa12.31□□□□□ -0.44
CASC19-247ENST00000641642 CCDC129Q6ZRS4 1044 aa12.31□□□□□ -0.44
CASC19-247ENST00000641642 APOBEC3FQ8IUX4 373 aaKnown RBP12.31□□□□□ -0.44
CASC19-247ENST00000641642 SH3RF3Q8TEJ3 882 aaPredicted RBP12.31□□□□□ -0.44
CASC19-247ENST00000641642 USP26Q9BXU7 913 aa12.31□□□□□ -0.44
CASC19-247ENST00000641642 NAPBQ9H115 298 aa12.31□□□□□ -0.44
CASC19-247ENST00000641642 IL25Q9H293 177 aa12.31□□□□□ -0.44
CASC19-247ENST00000641642 DCP1AQ9NPI6 582 aaPredicted RBP12.31□□□□□ -0.44
CASC19-247ENST00000641642 ARPP21Q9UBL0 812 aaPredicted RBP12.31□□□□□ -0.44
CASC19-247ENST00000641642 ZNF70Q9UC06 446 aaPredicted RBP12.31□□□□□ -0.44
CASC19-247ENST00000641642 PPP2R3BQ9Y5P8 575 aa12.31□□□□□ -0.44
CASC19-247ENST00000641642 FGAP02671 866 aa12.3□□□□□ -0.44
CASC19-247ENST00000641642 APLP1P51693 650 aa12.3□□□□□ -0.44
CASC19-247ENST00000641642 TSGA10IPQ3SY00 556 aa12.3□□□□□ -0.44
CASC19-247ENST00000641642 PADI6Q6TGC4 694 aa12.3□□□□□ -0.44
CASC19-247ENST00000641642 TTC6Q86TZ1 520 aa12.3□□□□□ -0.44
CASC19-247ENST00000641642 TGFBRAP1Q8WUH2 860 aa12.3□□□□□ -0.44
CASC19-247ENST00000641642 TAF1DQ9H5J8 278 aaPredicted RBP12.3□□□□□ -0.44
CASC19-247ENST00000641642 TDRD3Q9H7E2 651 aaKnown RBP12.3□□□□□ -0.44
CASC19-247ENST00000641642 PGAP2Q9UHJ9 254 aa12.3□□□□□ -0.44
CASC19-247ENST00000641642 FLT1P17948 1338 aa12.3□□□□□ -0.44
CASC19-247ENST00000641642 CDK5RAP2Q96SN8 1893 aa12.29□□□□□ -0.44
CASC19-247ENST00000641642 SLC3A2P08195 630 aaKnown RBP12.29□□□□□ -0.44
CASC19-247ENST00000641642 TDO2P48775 406 aa12.29□□□□□ -0.44
CASC19-247ENST00000641642 ANAPC15P60006 121 aa12.29□□□□□ -0.44
CASC19-247ENST00000641642 NECTIN1Q15223 517 aa12.29□□□□□ -0.44
CASC19-247ENST00000641642 IMMTQ16891 758 aaKnown RBP12.29□□□□□ -0.44
CASC19-247ENST00000641642 NBPF9Q3BBW0 867 aa12.29□□□□□ -0.44
CASC19-247ENST00000641642 TBC1D10BQ4KMP7 808 aaPredicted RBP12.29□□□□□ -0.44
CASC19-247ENST00000641642 VPS53Q5VIR6 699 aa12.29□□□□□ -0.44
CASC19-247ENST00000641642 SDR42E1Q8WUS8 393 aa12.29□□□□□ -0.44
CASC19-247ENST00000641642 FAM151AQ8WW52 585 aa12.29□□□□□ -0.44
CASC19-247ENST00000641642 HOOK2Q96ED9 719 aa12.29□□□□□ -0.44
CASC19-247ENST00000641642 OSBPL5Q9H0X9 879 aaPredicted RBP12.29□□□□□ -0.44
CASC19-247ENST00000641642 ZNF287Q9HBT7 754 aa12.29□□□□□ -0.44
CASC19-247ENST00000641642 ANAPC4Q9UJX5 808 aa12.29□□□□□ -0.44
CASC19-247ENST00000641642 ATRNL1Q5VV63 1379 aa12.29□□□□□ -0.44
CASC19-247ENST00000641642 SHTN1A0MZ66 631 aa12.28□□□□□ -0.44
CASC19-247ENST00000641642 POTECB2RU33 542 aa12.28□□□□□ -0.44
CASC19-247ENST00000641642 ZNF213O14771 459 aa12.28□□□□□ -0.44
CASC19-247ENST00000641642 FOXP2O15409 715 aa12.28□□□□□ -0.44
CASC19-247ENST00000641642 PRKAB2O43741 272 aa12.28□□□□□ -0.44
CASC19-247ENST00000641642 HLA-DOAP06340 250 aa12.28□□□□□ -0.44
CASC19-247ENST00000641642 ZKSCAN1P17029 563 aaPredicted RBP12.28□□□□□ -0.44
CASC19-247ENST00000641642 HSPA4P34932 840 aa12.28□□□□□ -0.44
CASC19-247ENST00000641642 PTH1RQ03431 593 aa12.28□□□□□ -0.44
CASC19-247ENST00000641642 KRT32Q14532 448 aa12.28□□□□□ -0.44
CASC19-247ENST00000641642 RBM26Q5T8P6 1007 aaKnown RBP12.28□□□□□ -0.44
CASC19-247ENST00000641642 TRPM4Q8TD43 1214 aa12.28□□□□□ -0.44
CASC19-247ENST00000641642 KCNB2Q92953 911 aa12.28□□□□□ -0.44
CASC19-247ENST00000641642 IL17RAQ96F46 866 aa12.28□□□□□ -0.44
CASC19-247ENST00000641642 EHD4Q9H223 541 aa12.28□□□□□ -0.44
CASC19-247ENST00000641642 MCM9Q9NXL9 1143 aa12.28□□□□□ -0.44
CASC19-247ENST00000641642 PI4KBQ9UBF8 816 aa12.28□□□□□ -0.44
CASC19-247ENST00000641642 RBM8AQ9Y5S9 174 aaKnown RBP12.28□□□□□ -0.44
CASC19-247ENST00000641642 MYH1P12882 1939 aa12.27□□□□□ -0.44
CASC19-247ENST00000641642 EGFRP00533 1210 aa12.27□□□□□ -0.45
CASC19-247ENST00000641642 POLR3DP05423 398 aaPredicted RBP12.27□□□□□ -0.45
CASC19-247ENST00000641642 RBM25P49756 843 aaKnown RBP12.27□□□□□ -0.45
CASC19-247ENST00000641642 HIRAP54198 1017 aaPredicted RBP12.27□□□□□ -0.45
CASC19-247ENST00000641642 LAPTM4AQ15012 233 aa12.27□□□□□ -0.45
CASC19-247ENST00000641642 C12orf60Q5U649 245 aa12.27□□□□□ -0.45
CASC19-247ENST00000641642 CTR9Q6PD62 1173 aa12.27□□□□□ -0.45
CASC19-247ENST00000641642 FOXP4Q8IVH2 680 aaPredicted RBP12.27□□□□□ -0.45
CASC19-247ENST00000641642 DCPSQ96C86 337 aaKnown RBP12.27□□□□□ -0.45
CASC19-247ENST00000641642 RNF41Q9H4P4 317 aaPredicted RBP12.27□□□□□ -0.45
CASC19-247ENST00000641642 EPB41L4AQ9HCS5 686 aaPredicted RBP12.27□□□□□ -0.45
CASC19-247ENST00000641642 PCDHAC2Q9Y5I4 1007 aa12.27□□□□□ -0.45
CASC19-247ENST00000641642 ADAMTSL1Q8N6G6 1762 aa12.27□□□□□ -0.45
CASC19-247ENST00000641642 NAV1Q8NEY1 1877 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms