RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 ZSCAN12O43309 604 aa13.5□□□□□ -0.25
RBFOX1-224ENST00000641259 TBC1D8O95759 1140 aa13.5□□□□□ -0.25
RBFOX1-224ENST00000641259 CALRP27797 417 aaKnown RBP13.5□□□□□ -0.25
RBFOX1-224ENST00000641259 PSEN1P49768 467 aa13.5□□□□□ -0.25
RBFOX1-224ENST00000641259 E2F5Q15329 346 aa13.5□□□□□ -0.25
RBFOX1-224ENST00000641259 RFX7Q2KHR2 1363 aa13.5□□□□□ -0.25
RBFOX1-224ENST00000641259 TRIM37O94972 964 aa13.5□□□□□ -0.25
RBFOX1-224ENST00000641259 CCZ1BP86790 482 aa13.5□□□□□ -0.25
RBFOX1-224ENST00000641259 CCZ1P86791 482 aaPredicted RBP13.5□□□□□ -0.25
RBFOX1-224ENST00000641259 FAM196AQ6ZSG2 479 aa13.5□□□□□ -0.25
RBFOX1-224ENST00000641259 N4BP2L2Q92802 583 aaPredicted RBP13.5□□□□□ -0.25
RBFOX1-224ENST00000641259 IRX2Q9BZI1 471 aaPredicted RBP13.5□□□□□ -0.25
RBFOX1-224ENST00000641259 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.5□□□□□ -0.25
RBFOX1-224ENST00000641259 UBR3Q6ZT12 1888 aa13.49□□□□□ -0.25
RBFOX1-224ENST00000641259 CHMP4BP1P59074 171 aa13.49□□□□□ -0.25
RBFOX1-224ENST00000641259 ACTN3Q08043 901 aaPredicted RBP13.49□□□□□ -0.25
RBFOX1-224ENST00000641259 MUM1L1Q5H9M0 696 aa13.49□□□□□ -0.25
RBFOX1-224ENST00000641259 CCDC150Q8NCX0 1101 aa13.49□□□□□ -0.25
RBFOX1-224ENST00000641259 FUCA2Q9BTY2 467 aa13.49□□□□□ -0.25
RBFOX1-224ENST00000641259 MAST3O60307 1309 aa13.49□□□□□ -0.25
RBFOX1-224ENST00000641259 RPAP1Q9BWH6 1393 aaPredicted RBP13.49□□□□□ -0.25
RBFOX1-224ENST00000641259 CCP110O43303 1012 aa13.49□□□□□ -0.25
RBFOX1-224ENST00000641259 ADKP55263 362 aaKnown RBP13.49□□□□□ -0.25
RBFOX1-224ENST00000641259 CCDC158Q5M9N0 1113 aa13.49□□□□□ -0.25
RBFOX1-224ENST00000641259 HDXQ7Z353 690 aa13.49□□□□□ -0.25
RBFOX1-224ENST00000641259 TADA2BQ86TJ2 420 aa13.49□□□□□ -0.25
RBFOX1-224ENST00000641259 CALR3Q96L12 384 aaKnown RBP13.49□□□□□ -0.25
RBFOX1-224ENST00000641259 RTCBQ9Y3I0 505 aaKnown RBP13.49□□□□□ -0.25
RBFOX1-224ENST00000641259 FOXP2O15409 715 aa13.49□□□□□ -0.25
RBFOX1-224ENST00000641259 GBP2P32456 591 aaPredicted RBP13.49□□□□□ -0.25
RBFOX1-224ENST00000641259 MATR3P43243 847 aaKnown RBP eCLIP13.49□□□□□ -0.25
RBFOX1-224ENST00000641259 FAM160A1Q05DH4 1040 aa13.49□□□□□ -0.25
RBFOX1-224ENST00000641259 MCMDC2Q4G0Z9 681 aa13.49□□□□□ -0.25
RBFOX1-224ENST00000641259 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.49□□□□□ -0.25
RBFOX1-224ENST00000641259 RIN2Q8WYP3 895 aaPredicted RBP13.49□□□□□ -0.25
RBFOX1-224ENST00000641259 OSBP2Q969R2 916 aa13.49□□□□□ -0.25
RBFOX1-224ENST00000641259 CAPZA3Q96KX2 299 aa13.49□□□□□ -0.25
RBFOX1-224ENST00000641259 SKAP2O75563 359 aaPredicted RBP13.48□□□□□ -0.25
RBFOX1-224ENST00000641259 CLNS1AP54105 237 aaKnown RBP13.48□□□□□ -0.25
RBFOX1-224ENST00000641259 CCDC152Q4G0S7 254 aa13.48□□□□□ -0.25
RBFOX1-224ENST00000641259 CCDC102BQ68D86 513 aa13.48□□□□□ -0.25
RBFOX1-224ENST00000641259 NYAP1Q6ZVC0 841 aa13.48□□□□□ -0.25
RBFOX1-224ENST00000641259 DHX58Q96C10 678 aa13.48□□□□□ -0.25
RBFOX1-224ENST00000641259 CFAP45Q9UL16 551 aa13.48□□□□□ -0.25
RBFOX1-224ENST00000641259 EIF4E1BA6NMX2 242 aaKnown RBP13.48□□□□□ -0.25
RBFOX1-224ENST00000641259 ZMYM1Q5SVZ6 1142 aa13.48□□□□□ -0.25
RBFOX1-224ENST00000641259 OTUD6BQ8N6M0 293 aa13.48□□□□□ -0.25
RBFOX1-224ENST00000641259 MROH5Q6ZUA9 1318 aa13.48□□□□□ -0.25
RBFOX1-224ENST00000641259 RTL9Q8NET4 1388 aa13.48□□□□□ -0.25
RBFOX1-224ENST00000641259 EFCAB8A8MWE9 144 aa13.48□□□□□ -0.25
RBFOX1-224ENST00000641259 ZNF569Q5MCW4 686 aa13.48□□□□□ -0.25
RBFOX1-224ENST00000641259 KLHL10Q6JEL2 608 aa13.48□□□□□ -0.25
RBFOX1-224ENST00000641259 MYH7P12883 1935 aa13.47□□□□□ -0.25
RBFOX1-224ENST00000641259 MPHOSPH10O00566 681 aaKnown RBP13.47□□□□□ -0.25
RBFOX1-224ENST00000641259 PUM3Q15397 648 aaKnown RBP13.47□□□□□ -0.25
RBFOX1-224ENST00000641259 KRT27Q7Z3Y8 459 aa13.47□□□□□ -0.25
RBFOX1-224ENST00000641259 AFAP1L1Q8TED9 768 aa13.47□□□□□ -0.25
RBFOX1-224ENST00000641259 MPHOSPH8Q99549 860 aa13.47□□□□□ -0.25
RBFOX1-224ENST00000641259 ZSWIM6Q9HCJ5 1215 aa13.47□□□□□ -0.25
RBFOX1-224ENST00000641259 PIH1D3Q9NQM4 214 aaKnown RBP13.47□□□□□ -0.25
RBFOX1-224ENST00000641259 TFRCP02786 760 aaKnown RBP13.47□□□□□ -0.25
RBFOX1-224ENST00000641259 ATP1A3P13637 1013 aa13.47□□□□□ -0.25
RBFOX1-224ENST00000641259 PROM2Q8N271 834 aa13.47□□□□□ -0.25
RBFOX1-224ENST00000641259 CELF1Q92879 486 aaKnown RBP13.47□□□□□ -0.25
RBFOX1-224ENST00000641259 ZPR1O75312 459 aa13.46□□□□□ -0.25
RBFOX1-224ENST00000641259 DNA2P51530 1060 aa13.46□□□□□ -0.25
RBFOX1-224ENST00000641259 CHRNDQ07001 517 aa13.46□□□□□ -0.25
RBFOX1-224ENST00000641259 OTUD7BQ6GQQ9 843 aa13.46□□□□□ -0.25
RBFOX1-224ENST00000641259 BCAS4Q8TDM0 211 aa13.46□□□□□ -0.25
RBFOX1-224ENST00000641259 ZSCAN31Q96LW9 406 aaPredicted RBP13.46□□□□□ -0.25
RBFOX1-224ENST00000641259 LAMA4Q16363 1823 aa13.46□□□□□ -0.25
RBFOX1-224ENST00000641259 RNF113AO15541 343 aaKnown RBP13.46□□□□□ -0.25
RBFOX1-224ENST00000641259 SLC3A2P08195 630 aaKnown RBP13.46□□□□□ -0.25
RBFOX1-224ENST00000641259 CYP21A2P08686 494 aa13.46□□□□□ -0.25
RBFOX1-224ENST00000641259 CHRM1P11229 460 aaPredicted RBP13.46□□□□□ -0.25
RBFOX1-224ENST00000641259 APOBRQ0VD83 1088 aa13.46□□□□□ -0.25
RBFOX1-224ENST00000641259 ST3GAL1Q11201 340 aa13.46□□□□□ -0.25
RBFOX1-224ENST00000641259 NAIF1Q69YI7 327 aaPredicted RBP13.46□□□□□ -0.25
RBFOX1-224ENST00000641259 SAMD1Q6SPF0 538 aaPredicted RBP13.46□□□□□ -0.25
RBFOX1-224ENST00000641259 GPR161Q8N6U8 529 aaKnown RBP13.46□□□□□ -0.25
RBFOX1-224ENST00000641259 PUS7LQ9H0K6 701 aaKnown RBP13.46□□□□□ -0.25
RBFOX1-224ENST00000641259 ABCB6Q9NP58 842 aa13.46□□□□□ -0.25
RBFOX1-224ENST00000641259 LPIN2Q92539 896 aa13.46□□□□□ -0.26
RBFOX1-224ENST00000641259 WDR24Q96S15 920 aa13.46□□□□□ -0.26
RBFOX1-224ENST00000641259 TPCN1Q9ULQ1 816 aa13.46□□□□□ -0.26
RBFOX1-224ENST00000641259 MRPS25P82663 173 aaKnown RBP13.45□□□□□ -0.26
RBFOX1-224ENST00000641259 DPCR1Q3MIW9 517 aa13.45□□□□□ -0.26
RBFOX1-224ENST00000641259 OLFM4Q6UX06 510 aa13.45□□□□□ -0.26
RBFOX1-224ENST00000641259 SYNE3Q6ZMZ3 975 aa13.45□□□□□ -0.26
RBFOX1-224ENST00000641259 STOX1Q6ZVD7 989 aa13.45□□□□□ -0.26
RBFOX1-224ENST00000641259 MRFAP1L1Q96HT8 127 aa13.45□□□□□ -0.26
RBFOX1-224ENST00000641259 SETDB2Q96T68 719 aa13.45□□□□□ -0.26
RBFOX1-224ENST00000641259 KIF5CO60282 957 aa13.45□□□□□ -0.26
RBFOX1-224ENST00000641259 ARID4AP29374 1257 aaPredicted RBP13.45□□□□□ -0.26
RBFOX1-224ENST00000641259 MARCKSP29966 332 aaPredicted RBP13.45□□□□□ -0.26
RBFOX1-224ENST00000641259 GCKP35557 465 aa13.45□□□□□ -0.26
RBFOX1-224ENST00000641259 BCAMP50895 628 aa13.45□□□□□ -0.26
RBFOX1-224ENST00000641259 TADA3O75528 432 aa13.45□□□□□ -0.26
RBFOX1-224ENST00000641259 ELP1O95163 1332 aa13.45□□□□□ -0.26
RBFOX1-224ENST00000641259 KIF4AO95239 1232 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms