RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 MMS22LQ6ZRQ5 1243 aa15.58■□□□□ 0.08
SCARB2-227ENST00000640957 BANK1Q8NDB2 785 aa15.58■□□□□ 0.08
SCARB2-227ENST00000640957 EPSTI1Q96J88 318 aa15.58■□□□□ 0.08
SCARB2-227ENST00000640957 CD248Q9HCU0 757 aa15.58■□□□□ 0.08
SCARB2-227ENST00000640957 MYO6Q9UM54 1294 aa15.58■□□□□ 0.08
SCARB2-227ENST00000640957 PCDHB6Q9Y5E3 794 aa15.58■□□□□ 0.08
SCARB2-227ENST00000640957 MAP2K2P36507 400 aa15.57■□□□□ 0.08
SCARB2-227ENST00000640957 C2orf54Q08AI8 447 aa15.57■□□□□ 0.08
SCARB2-227ENST00000640957 PTPAQ15257 358 aa15.57■□□□□ 0.08
SCARB2-227ENST00000640957 IMMTQ16891 758 aaKnown RBP15.57■□□□□ 0.08
SCARB2-227ENST00000640957 IQUBQ8NA54 791 aa15.57■□□□□ 0.08
SCARB2-227ENST00000640957 METTL22Q9BUU2 404 aaPredicted RBP15.57■□□□□ 0.08
SCARB2-227ENST00000640957 DUSP10Q9Y6W6 482 aa15.57■□□□□ 0.08
SCARB2-227ENST00000640957 ATP1A1P05023 1023 aaKnown RBP15.57■□□□□ 0.08
SCARB2-227ENST00000640957 MCTP2Q6DN12 878 aa15.57■□□□□ 0.08
SCARB2-227ENST00000640957 BRAPQ7Z569 592 aa15.57■□□□□ 0.08
SCARB2-227ENST00000640957 FCHSD1Q86WN1 690 aa15.57■□□□□ 0.08
SCARB2-227ENST00000640957 CCDC148Q8NFR7 591 aa15.57■□□□□ 0.08
SCARB2-227ENST00000640957 HDAC7Q8WUI4 952 aa15.57■□□□□ 0.08
SCARB2-227ENST00000640957 MACROD2A1Z1Q3 448 aa15.56■□□□□ 0.08
SCARB2-227ENST00000640957 N4BP3O15049 544 aa15.56■□□□□ 0.08
SCARB2-227ENST00000640957 GNGT1P63211 74 aa15.56■□□□□ 0.08
SCARB2-227ENST00000640957 TRIM29Q14134 588 aa15.56■□□□□ 0.08
SCARB2-227ENST00000640957 NR1I3Q14994 352 aa15.56■□□□□ 0.08
SCARB2-227ENST00000640957 ANKRD20A12PQ8NF67 263 aa15.56■□□□□ 0.08
SCARB2-227ENST00000640957 EHD2Q9NZN4 543 aa15.56■□□□□ 0.08
SCARB2-227ENST00000640957 CXCR5P32302 372 aa15.56■□□□□ 0.08
SCARB2-227ENST00000640957 PDCLQ13371 301 aa15.56■□□□□ 0.08
SCARB2-227ENST00000640957 CYB5R4Q7L1T6 521 aa15.56■□□□□ 0.08
SCARB2-227ENST00000640957 NBPF3Q9H094 633 aa15.56■□□□□ 0.08
SCARB2-227ENST00000640957 MKRN1Q9UHC7 482 aaKnown RBP15.56■□□□□ 0.08
SCARB2-227ENST00000640957 HPSEQ9Y251 543 aa15.56■□□□□ 0.08
SCARB2-227ENST00000640957 GOLGA6CA6NDK9 693 aa15.56■□□□□ 0.08
SCARB2-227ENST00000640957 EBAG9O00559 213 aa15.56■□□□□ 0.08
SCARB2-227ENST00000640957 ZNF213O14771 459 aa15.56■□□□□ 0.08
SCARB2-227ENST00000640957 RNF113AO15541 343 aaKnown RBP15.56■□□□□ 0.08
SCARB2-227ENST00000640957 GYPCP04921 128 aa15.56■□□□□ 0.08
SCARB2-227ENST00000640957 GOLGA6DP0CG33 693 aa15.56■□□□□ 0.08
SCARB2-227ENST00000640957 ZMYM1Q5SVZ6 1142 aa15.56■□□□□ 0.08
SCARB2-227ENST00000640957 RESP18Q5W5W9 173 aa15.56■□□□□ 0.08
SCARB2-227ENST00000640957 KCNV1Q6PIU1 500 aa15.56■□□□□ 0.08
SCARB2-227ENST00000640957 NUTM2AQ8IVF1 878 aaPredicted RBP15.56■□□□□ 0.08
SCARB2-227ENST00000640957 GNL3LQ9NVN8 582 aaKnown RBP15.56■□□□□ 0.08
SCARB2-227ENST00000640957 GOLGA6AQ9NYA3 693 aa15.56■□□□□ 0.08
SCARB2-227ENST00000640957 RAB21Q9UL25 225 aa15.56■□□□□ 0.08
SCARB2-227ENST00000640957 BACH1O14867 736 aa15.55■□□□□ 0.08
SCARB2-227ENST00000640957 ACTN3Q08043 901 aaPredicted RBP15.55■□□□□ 0.08
SCARB2-227ENST00000640957 PDIA6Q15084 440 aa15.55■□□□□ 0.08
SCARB2-227ENST00000640957 RNF187Q5TA31 235 aaPredicted RBP15.55■□□□□ 0.08
SCARB2-227ENST00000640957 JMYQ8N9B5 988 aa15.55■□□□□ 0.08
SCARB2-227ENST00000640957 OXER1Q8TDS5 423 aa15.55■□□□□ 0.08
SCARB2-227ENST00000640957 SMCR8Q8TEV9 937 aaPredicted RBP15.55■□□□□ 0.08
SCARB2-227ENST00000640957 HPCAL4Q9UM19 191 aa15.55■□□□□ 0.08
SCARB2-227ENST00000640957 CTNND2Q9UQB3 1225 aa15.55■□□□□ 0.08
SCARB2-227ENST00000640957 CYP27B1O15528 508 aa15.55■□□□□ 0.08
SCARB2-227ENST00000640957 SND1Q7KZF4 910 aaKnown RBP eCLIP15.55■□□□□ 0.082e-6■■□□□ 13.9
SCARB2-227ENST00000640957 MSANTD4Q8NCY6 345 aa15.55■□□□□ 0.08
SCARB2-227ENST00000640957 JADE2Q9NQC1 790 aa15.55■□□□□ 0.08
SCARB2-227ENST00000640957 PXDNQ92626 1479 aa15.55■□□□□ 0.08
SCARB2-227ENST00000640957 MON2Q7Z3U7 1717 aa15.55■□□□□ 0.08
SCARB2-227ENST00000640957 PHKG2P15735 406 aa15.55■□□□□ 0.08
SCARB2-227ENST00000640957 SCP2P22307 547 aa15.55■□□□□ 0.08
SCARB2-227ENST00000640957 KRT9P35527 623 aa15.55■□□□□ 0.08
SCARB2-227ENST00000640957 RFX5P48382 616 aaPredicted RBP15.55■□□□□ 0.08
SCARB2-227ENST00000640957 IRAK1P51617 712 aa15.55■□□□□ 0.08
SCARB2-227ENST00000640957 CYP27A1Q02318 531 aa15.55■□□□□ 0.08
SCARB2-227ENST00000640957 EFCAB13Q8IY85 973 aa15.55■□□□□ 0.08
SCARB2-227ENST00000640957 KRI1Q8N9T8 703 aaKnown RBP15.55■□□□□ 0.08
SCARB2-227ENST00000640957 NUP133Q8WUM0 1156 aa15.55■□□□□ 0.08
SCARB2-227ENST00000640957 FAM170AA1A519 330 aa15.54■□□□□ 0.08
SCARB2-227ENST00000640957 ZNF18P17022 549 aa15.54■□□□□ 0.08
SCARB2-227ENST00000640957 IARSP41252 1262 aaKnown RBP15.54■□□□□ 0.08
SCARB2-227ENST00000640957 FAM76AQ8TAV0 307 aa15.54■□□□□ 0.08
SCARB2-227ENST00000640957 MAP3K14Q99558 947 aa15.54■□□□□ 0.08
SCARB2-227ENST00000640957 CABP5Q9NP86 173 aa15.54■□□□□ 0.08
SCARB2-227ENST00000640957 CEMIPQ8WUJ3 1361 aa15.54■□□□□ 0.08
SCARB2-227ENST00000640957 FAM208AQ9UK61 1670 aaKnown RBP15.54■□□□□ 0.08
SCARB2-227ENST00000640957 A0A087WUV0 522 aaPredicted RBP15.54■□□□□ 0.08
SCARB2-227ENST00000640957 FOXP2O15409 715 aa15.54■□□□□ 0.08
SCARB2-227ENST00000640957 INPP5BP32019 993 aa15.54■□□□□ 0.08
SCARB2-227ENST00000640957 DPYDQ12882 1025 aa15.54■□□□□ 0.08
SCARB2-227ENST00000640957 HNRNPLLQ8WVV9 542 aaKnown RBP15.54■□□□□ 0.08
SCARB2-227ENST00000640957 DSCC1Q9BVC3 393 aa15.54■□□□□ 0.08
SCARB2-227ENST00000640957 CSRNP2Q9H175 543 aa15.54■□□□□ 0.08
SCARB2-227ENST00000640957 YY1AP1Q9H869 796 aa15.54■□□□□ 0.08
SCARB2-227ENST00000640957 CEP126Q9P2H0 1117 aa15.54■□□□□ 0.08
SCARB2-227ENST00000640957 SETD1AO15047 1707 aaKnown RBP15.54■□□□□ 0.08
SCARB2-227ENST00000640957 RANBP6O60518 1105 aaKnown RBP15.53■□□□□ 0.08
SCARB2-227ENST00000640957 MFAP3LO75121 409 aa15.53■□□□□ 0.08
SCARB2-227ENST00000640957 CCDC57Q2TAC2 916 aa15.53■□□□□ 0.08
SCARB2-227ENST00000640957 AIDAQ96BJ3 306 aa15.53■□□□□ 0.08
SCARB2-227ENST00000640957 FAM89AQ96GI7 184 aa15.53■□□□□ 0.08
SCARB2-227ENST00000640957 UBR1Q8IWV7 1749 aa15.53■□□□□ 0.08
SCARB2-227ENST00000640957 A0A087X0B3 334 aa15.53■□□□□ 0.08
SCARB2-227ENST00000640957 ZAP70P43403 619 aa15.53■□□□□ 0.08
SCARB2-227ENST00000640957 USP5P45974 858 aa15.53■□□□□ 0.08
SCARB2-227ENST00000640957 RNASE9P60153 205 aaKnown RBP15.53■□□□□ 0.08
SCARB2-227ENST00000640957 CPLX2Q6PUV4 134 aaKnown RBP15.53■□□□□ 0.08
SCARB2-227ENST00000640957 NCOA7Q8NI08 942 aa15.53■□□□□ 0.08
SCARB2-227ENST00000640957 CDHR2Q9BYE9 1310 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms