RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-223ENST00000640931 EZH1Q92800 747 aaPredicted RBP9.05□□□□□ -0.96
RTTN-223ENST00000640931 GPATCH3Q96I76 525 aa9.05□□□□□ -0.96
RTTN-223ENST00000640931 YIPF2Q9BWQ6 316 aa9.05□□□□□ -0.96
RTTN-223ENST00000640931 RBM8AQ9Y5S9 174 aaKnown RBP9.05□□□□□ -0.96
RTTN-223ENST00000640931 WNK3Q9BYP7 1800 aa9.04□□□□□ -0.96
RTTN-223ENST00000640931 LOC102724428A0A0B4J2F2 783 aa9.04□□□□□ -0.96
RTTN-223ENST00000640931 ST18O60284 1047 aa9.04□□□□□ -0.96
RTTN-223ENST00000640931 AK2P54819 239 aa9.04□□□□□ -0.96
RTTN-223ENST00000640931 SIK1P57059 783 aa9.04□□□□□ -0.96
RTTN-223ENST00000640931 DEUP1Q05D60 604 aa9.04□□□□□ -0.96
RTTN-223ENST00000640931 VPS53Q5VIR6 699 aa9.04□□□□□ -0.96
RTTN-223ENST00000640931 SLC51AQ86UW1 340 aa9.04□□□□□ -0.96
RTTN-223ENST00000640931 AMIGO3Q86WK7 504 aa9.04□□□□□ -0.96
RTTN-223ENST00000640931 MIPOL1Q8TD10 442 aa9.04□□□□□ -0.96
RTTN-223ENST00000640931 TEKT1Q969V4 418 aa9.04□□□□□ -0.96
RTTN-223ENST00000640931 FAM163AQ96GL9 167 aaPredicted RBP9.04□□□□□ -0.96
RTTN-223ENST00000640931 BATF3Q9NR55 127 aa9.04□□□□□ -0.96
RTTN-223ENST00000640931 TMOD4Q9NZQ9 345 aa9.04□□□□□ -0.96
RTTN-223ENST00000640931 TRMT112Q9UI30 125 aaKnown RBP9.04□□□□□ -0.96
RTTN-223ENST00000640931 LRP6O75581 1613 aa9.04□□□□□ -0.96
RTTN-223ENST00000640931 WTIPA6NIX2 430 aaPredicted RBP9.04□□□□□ -0.96
RTTN-223ENST00000640931 IRS4O14654 1257 aaPredicted RBP9.04□□□□□ -0.96
RTTN-223ENST00000640931 EPB41L2O43491 1005 aaKnown RBP9.04□□□□□ -0.96
RTTN-223ENST00000640931 RAD21O60216 631 aa9.04□□□□□ -0.96
RTTN-223ENST00000640931 BRD1O95696 1058 aa9.04□□□□□ -0.96
RTTN-223ENST00000640931 PCCAP05165 728 aaPredicted RBP9.04□□□□□ -0.96
RTTN-223ENST00000640931 MYL1P05976 194 aa9.04□□□□□ -0.96
RTTN-223ENST00000640931 ATP5JP18859 108 aa9.04□□□□□ -0.96
RTTN-223ENST00000640931 YY1P25490 414 aa9.04□□□□□ -0.96
RTTN-223ENST00000640931 CLNS1AP54105 237 aaKnown RBP9.04□□□□□ -0.96
RTTN-223ENST00000640931 FOXD4Q12950 439 aaPredicted RBP9.04□□□□□ -0.96
RTTN-223ENST00000640931 RUFY3Q7L099 469 aa9.04□□□□□ -0.96
RTTN-223ENST00000640931 SAMD3Q8N6K7 520 aa9.04□□□□□ -0.96
RTTN-223ENST00000640931 ZBTB38Q8NAP3 1195 aaPredicted RBP9.04□□□□□ -0.96
RTTN-223ENST00000640931 LINC00116Q8NCU8 138 aa9.04□□□□□ -0.96
RTTN-223ENST00000640931 TTLL11Q8NHH1 800 aa9.04□□□□□ -0.96
RTTN-223ENST00000640931 ZKSCAN4Q969J2 545 aaPredicted RBP9.04□□□□□ -0.96
RTTN-223ENST00000640931 JAKMIP1Q96N16 626 aaKnown RBP9.04□□□□□ -0.96
RTTN-223ENST00000640931 L2HGDHQ9H9P8 463 aa9.04□□□□□ -0.96
RTTN-223ENST00000640931 SEC31BQ9NQW1 1179 aa9.04□□□□□ -0.96
RTTN-223ENST00000640931 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.04□□□□□ -0.96
RTTN-223ENST00000640931 ZNF609O15014 1411 aa9.04□□□□□ -0.96
RTTN-223ENST00000640931 COL4A1P02462 1669 aa9.04□□□□□ -0.96
RTTN-223ENST00000640931 BCL9LQ86UU0 1499 aa9.03□□□□□ -0.96
RTTN-223ENST00000640931 CASTP20810 708 aaKnown RBP9.03□□□□□ -0.96
RTTN-223ENST00000640931 ITGA6P23229 1130 aa9.03□□□□□ -0.96
RTTN-223ENST00000640931 PSMC1P62191 440 aaKnown RBP9.03□□□□□ -0.96
RTTN-223ENST00000640931 SNX1Q13596 522 aa9.03□□□□□ -0.96
RTTN-223ENST00000640931 LAMB3Q13751 1172 aa9.03□□□□□ -0.96
RTTN-223ENST00000640931 PTPN14Q15678 1187 aa9.03□□□□□ -0.96
RTTN-223ENST00000640931 CCDC57Q2TAC2 916 aa9.03□□□□□ -0.96
RTTN-223ENST00000640931 CREB3L3Q68CJ9 461 aa9.03□□□□□ -0.96
RTTN-223ENST00000640931 KLHL10Q6JEL2 608 aa9.03□□□□□ -0.96
RTTN-223ENST00000640931 NYAP1Q6ZVC0 841 aa9.03□□□□□ -0.96
RTTN-223ENST00000640931 C3orf67Q6ZVT6 689 aa9.03□□□□□ -0.96
RTTN-223ENST00000640931 MFN1Q8IWA4 741 aa9.03□□□□□ -0.96
RTTN-223ENST00000640931 IQCF2Q8IXL9 164 aa9.03□□□□□ -0.96
RTTN-223ENST00000640931 PHC3Q8NDX5 983 aa9.03□□□□□ -0.96
RTTN-223ENST00000640931 POLR3CQ9BUI4 534 aaPredicted RBP9.03□□□□□ -0.96
RTTN-223ENST00000640931 PALLDQ8WX93 1383 aa9.03□□□□□ -0.96
RTTN-223ENST00000640931 SLC27A2O14975 620 aa9.03□□□□□ -0.96
RTTN-223ENST00000640931 TUBB4AP04350 444 aa9.03□□□□□ -0.96
RTTN-223ENST00000640931 CSF1RP07333 972 aa9.03□□□□□ -0.96
RTTN-223ENST00000640931 FAM200BP0CF97 657 aa9.03□□□□□ -0.96
RTTN-223ENST00000640931 ZNF24P17028 368 aa9.03□□□□□ -0.96
RTTN-223ENST00000640931 VCAM1P19320 739 aa9.03□□□□□ -0.96
RTTN-223ENST00000640931 ST3GAL1Q11201 340 aa9.03□□□□□ -0.96
RTTN-223ENST00000640931 MEX3CQ5U5Q3 659 aaKnown RBP9.03□□□□□ -0.96
RTTN-223ENST00000640931 ARMC3Q5W041 872 aa9.03□□□□□ -0.96
RTTN-223ENST00000640931 BICDL1Q6ZP65 573 aa9.03□□□□□ -0.96
RTTN-223ENST00000640931 APBB1IPQ7Z5R6 666 aaPredicted RBP9.03□□□□□ -0.96
RTTN-223ENST00000640931 MAB21L3Q8N8X9 362 aa9.03□□□□□ -0.96
RTTN-223ENST00000640931 NECAB1Q8N987 351 aa9.03□□□□□ -0.96
RTTN-223ENST00000640931 FAM81AQ8TBF8 368 aa9.03□□□□□ -0.96
RTTN-223ENST00000640931 ZBTB10Q96DT7 871 aa9.03□□□□□ -0.96
RTTN-223ENST00000640931 RBM17Q96I25 401 aaKnown RBP9.03□□□□□ -0.96
RTTN-223ENST00000640931 TTC14Q96N46 770 aa9.03□□□□□ -0.96
RTTN-223ENST00000640931 UNC45AQ9H3U1 944 aa9.03□□□□□ -0.96
RTTN-223ENST00000640931 ZCCHC17Q9NP64 241 aaKnown RBP9.03□□□□□ -0.96
RTTN-223ENST00000640931 CCDC87Q9NVE4 849 aa9.03□□□□□ -0.96
RTTN-223ENST00000640931 RGL1Q9NZL6 768 aa9.03□□□□□ -0.96
RTTN-223ENST00000640931 AHCYL1O43865 530 aa9.02□□□□□ -0.97
RTTN-223ENST00000640931 OPA1O60313 960 aa9.02□□□□□ -0.97
RTTN-223ENST00000640931 CAMTA2O94983 1202 aa9.02□□□□□ -0.97
RTTN-223ENST00000640931 TBC1D8O95759 1140 aa9.02□□□□□ -0.97
RTTN-223ENST00000640931 IL15P40933 162 aaPredicted RBP9.02□□□□□ -0.97
RTTN-223ENST00000640931 GJA8P48165 433 aa9.02□□□□□ -0.97
RTTN-223ENST00000640931 CDR1P51861 262 aa9.02□□□□□ -0.97
RTTN-223ENST00000640931 FKBP4Q02790 459 aaKnown RBP eCLIP9.02□□□□□ -0.97
RTTN-223ENST00000640931 NECTIN1Q15223 517 aa9.02□□□□□ -0.97
RTTN-223ENST00000640931 ISM2Q6H9L7 571 aa9.02□□□□□ -0.97
RTTN-223ENST00000640931 FOXR1Q6PIV2 292 aa9.02□□□□□ -0.97
RTTN-223ENST00000640931 ZNF34Q8IZ26 560 aa9.02□□□□□ -0.97
RTTN-223ENST00000640931 B4GALNT2Q8NHY0 566 aa9.02□□□□□ -0.97
RTTN-223ENST00000640931 XAGE2Q96GT9 111 aa9.02□□□□□ -0.97
RTTN-223ENST00000640931 HAUS7Q99871 368 aa9.02□□□□□ -0.97
RTTN-223ENST00000640931 ACBD3Q9H3P7 528 aa9.02□□□□□ -0.97
RTTN-223ENST00000640931 MYH14Q7Z406 1995 aaKnown RBP9.02□□□□□ -0.97
RTTN-223ENST00000640931 TESPA1A2RU30 521 aaPredicted RBP9.01□□□□□ -0.97
RTTN-223ENST00000640931 M0R2C6 588 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms