RNA–Protein interactions for RNA: ENST00000640909.1

KCNC1-213, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 5

Gene KCNC1, Length 1,270 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-213ENST00000640909 MTMR2Q13614 643 aa18.2■□□□□ 0.5
KCNC1-213ENST00000640909 PORCNQ9H237 461 aa18.2■□□□□ 0.5
KCNC1-213ENST00000640909 RBPJLQ9UBG7 517 aa18.2■□□□□ 0.5
KCNC1-213ENST00000640909 ATP11BQ9Y2G3 1177 aa18.2■□□□□ 0.5
KCNC1-213ENST00000640909 GPR75-ASB3A0A0A6YYF3 556 aa18.19■□□□□ 0.5
KCNC1-213ENST00000640909 ASNSP08243 561 aa18.19■□□□□ 0.5
KCNC1-213ENST00000640909 RHBDL3P58872 404 aa18.19■□□□□ 0.5
KCNC1-213ENST00000640909 DDX10Q13206 875 aaKnown RBP18.19■□□□□ 0.5
KCNC1-213ENST00000640909 ATP2B3Q16720 1220 aa18.19■□□□□ 0.5
KCNC1-213ENST00000640909 C1orf53Q5VUE5 145 aa18.19■□□□□ 0.5
KCNC1-213ENST00000640909 SPTY2D1Q68D10 685 aaPredicted RBP18.19■□□□□ 0.5
KCNC1-213ENST00000640909 USP38Q8NB14 1042 aa18.19■□□□□ 0.5
KCNC1-213ENST00000640909 BADQ92934 168 aa18.19■□□□□ 0.5
KCNC1-213ENST00000640909 EDC3Q96F86 508 aaKnown RBP18.19■□□□□ 0.5
KCNC1-213ENST00000640909 GINM1Q9NU53 330 aa18.19■□□□□ 0.5
KCNC1-213ENST00000640909 RAPGEFL1Q9UHV5 662 aa18.19■□□□□ 0.5
KCNC1-213ENST00000640909 FAM196BA6NMK8 535 aa18.18■□□□□ 0.5
KCNC1-213ENST00000640909 HOXC6P09630 235 aa18.18■□□□□ 0.5
KCNC1-213ENST00000640909 CCNA1P78396 465 aa18.18■□□□□ 0.5
KCNC1-213ENST00000640909 SLC39A5Q6ZMH5 540 aa18.18■□□□□ 0.5
KCNC1-213ENST00000640909 WDR63Q8IWG1 891 aa18.18■□□□□ 0.5
KCNC1-213ENST00000640909 ARRDC4Q8NCT1 418 aa18.18■□□□□ 0.5
KCNC1-213ENST00000640909 PRDM5Q9NQX1 630 aaPredicted RBP18.18■□□□□ 0.5
KCNC1-213ENST00000640909 ZNF236Q9UL36 1845 aa18.17■□□□□ 0.5
KCNC1-213ENST00000640909 RFX5P48382 616 aaPredicted RBP18.17■□□□□ 0.5
KCNC1-213ENST00000640909 MAP3K12Q12852 859 aa18.17■□□□□ 0.5
KCNC1-213ENST00000640909 Q3C1V9 767 aa18.17■□□□□ 0.5
KCNC1-213ENST00000640909 RNPC3Q96LT9 517 aaKnown RBP18.17■□□□□ 0.5
KCNC1-213ENST00000640909 CWC22Q9HCG8 908 aaKnown RBP18.17■□□□□ 0.5
KCNC1-213ENST00000640909 PDLIM7Q9NR12 457 aa18.17■□□□□ 0.5
KCNC1-213ENST00000640909 SYNGAP1Q96PV0 1343 aa18.17■□□□□ 0.5
KCNC1-213ENST00000640909 USP17L10C9JJH3 530 aa18.16■□□□□ 0.5
KCNC1-213ENST00000640909 KBTBD13C9JR72 458 aa18.16■□□□□ 0.5
KCNC1-213ENST00000640909 CIAO1O76071 339 aa18.16■□□□□ 0.5
KCNC1-213ENST00000640909 PHKA1P46020 1223 aa18.16■□□□□ 0.5
KCNC1-213ENST00000640909 ATG9AQ7Z3C6 839 aa18.16■□□□□ 0.5
KCNC1-213ENST00000640909 ASB2Q96Q27 587 aa18.16■□□□□ 0.5
KCNC1-213ENST00000640909 THEGQ9P2T0 379 aa18.16■□□□□ 0.5
KCNC1-213ENST00000640909 RABGAP1Q9Y3P9 1069 aa18.16■□□□□ 0.5
KCNC1-213ENST00000640909 SIPA1L1O43166 1804 aa18.16■□□□□ 0.5
KCNC1-213ENST00000640909 SLC15A5A6NIM6 579 aa18.15■□□□□ 0.5
KCNC1-213ENST00000640909 DNAJB2P25686 324 aa18.15■□□□□ 0.5
KCNC1-213ENST00000640909 CNGA1P29973 690 aa18.15■□□□□ 0.5
KCNC1-213ENST00000640909 GRIN2CQ14957 1233 aa18.15■□□□□ 0.5
KCNC1-213ENST00000640909 AKNAD1Q5T1N1 836 aa18.15■□□□□ 0.5
KCNC1-213ENST00000640909 PAGR1Q9BTK6 254 aa18.15■□□□□ 0.5
KCNC1-213ENST00000640909 CEP126Q9P2H0 1117 aa18.15■□□□□ 0.5
KCNC1-213ENST00000640909 ABCF2Q9UG63 623 aa18.15■□□□□ 0.5
KCNC1-213ENST00000640909 PEX10O60683 326 aa18.14■□□□□ 0.49
KCNC1-213ENST00000640909 CYBAP13498 195 aa18.14■□□□□ 0.49
KCNC1-213ENST00000640909 PTPREP23469 700 aa18.14■□□□□ 0.49
KCNC1-213ENST00000640909 RRP1BQ14684 758 aaKnown RBP18.14■□□□□ 0.49
KCNC1-213ENST00000640909 TRIM60Q495X7 471 aa18.14■□□□□ 0.49
KCNC1-213ENST00000640909 CCDC102BQ68D86 513 aa18.14■□□□□ 0.49
KCNC1-213ENST00000640909 ADAMTS19Q8TE59 1207 aa18.14■□□□□ 0.49
KCNC1-213ENST00000640909 C1QTNF1Q9BXJ1 281 aa18.14■□□□□ 0.49
KCNC1-213ENST00000640909 DHX36Q9H2U1 1008 aaKnown RBP18.14■□□□□ 0.49
KCNC1-213ENST00000640909 FLRT1Q9NZU1 646 aa18.14■□□□□ 0.49
KCNC1-213ENST00000640909 PI4KBQ9UBF8 816 aa18.14■□□□□ 0.49
KCNC1-213ENST00000640909 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.13■□□□□ 0.49
KCNC1-213ENST00000640909 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.13■□□□□ 0.49
KCNC1-213ENST00000640909 IGHA2P01877 340 aa18.13■□□□□ 0.49
KCNC1-213ENST00000640909 GSTO1P78417 241 aa18.13■□□□□ 0.49
KCNC1-213ENST00000640909 ATP2B2Q01814 1243 aa18.13■□□□□ 0.49
KCNC1-213ENST00000640909 RASGRF1Q13972 1273 aa18.13■□□□□ 0.49
KCNC1-213ENST00000640909 GRB14Q14449 540 aa18.13■□□□□ 0.49
KCNC1-213ENST00000640909 ERICH6Q7L0X2 663 aa18.13■□□□□ 0.49
KCNC1-213ENST00000640909 UHRF1Q96T88 793 aaPredicted RBP18.13■□□□□ 0.49
KCNC1-213ENST00000640909 GAS2L1Q99501 681 aaPredicted RBP18.13■□□□□ 0.49
KCNC1-213ENST00000640909 ZNF576Q9H609 170 aa18.13■□□□□ 0.49
KCNC1-213ENST00000640909 TACC3Q9Y6A5 838 aa18.13■□□□□ 0.49
KCNC1-213ENST00000640909 IVNS1ABPQ9Y6Y0 642 aa18.13■□□□□ 0.49
KCNC1-213ENST00000640909 TRIM43BA6NCK2 446 aa18.12■□□□□ 0.49
KCNC1-213ENST00000640909 LDHCP07864 332 aa18.12■□□□□ 0.49
KCNC1-213ENST00000640909 MRPS5P82675 430 aaKnown RBP18.12■□□□□ 0.49
KCNC1-213ENST00000640909 MECOMQ03112 1051 aa18.12■□□□□ 0.49
KCNC1-213ENST00000640909 GJC2Q5T442 439 aaPredicted RBP18.12■□□□□ 0.49
KCNC1-213ENST00000640909 TRIM43Q96BQ3 446 aaPredicted RBP18.12■□□□□ 0.49
KCNC1-213ENST00000640909 OLFML2BQ68BL8 750 aa18.11■□□□□ 0.49
KCNC1-213ENST00000640909 POTEEQ6S8J3 1075 aa18.11■□□□□ 0.49
KCNC1-213ENST00000640909 LBX2Q6XYB7 198 aa18.11■□□□□ 0.49
KCNC1-213ENST00000640909 C12orf42Q96LP6 360 aa18.11■□□□□ 0.49
KCNC1-213ENST00000640909 USP44Q9H0E7 712 aa18.11■□□□□ 0.49
KCNC1-213ENST00000640909 FOCADQ5VW36 1801 aa18.1■□□□□ 0.49
KCNC1-213ENST00000640909 PTPRCP08575 1304 aa18.1■□□□□ 0.49
KCNC1-213ENST00000640909 ZNF316A6NFI3 1004 aaPredicted RBP18.1■□□□□ 0.49
KCNC1-213ENST00000640909 SEPT4O43236 478 aa18.1■□□□□ 0.49
KCNC1-213ENST00000640909 IL15P40933 162 aaPredicted RBP18.1■□□□□ 0.49
KCNC1-213ENST00000640909 USP17L2Q6R6M4 530 aa18.1■□□□□ 0.49
KCNC1-213ENST00000640909 METTL16Q86W50 562 aaKnown RBP18.1■□□□□ 0.49
KCNC1-213ENST00000640909 TRPV1Q8NER1 839 aa18.1■□□□□ 0.49
KCNC1-213ENST00000640909 IL27Q8NEV9 243 aa18.1■□□□□ 0.49
KCNC1-213ENST00000640909 TIFAQ96CG3 184 aa18.1■□□□□ 0.49
KCNC1-213ENST00000640909 KIAA0355O15063 1070 aa18.09■□□□□ 0.49
KCNC1-213ENST00000640909 CLTBP09497 229 aa18.09■□□□□ 0.49
KCNC1-213ENST00000640909 CYP2C19P33261 490 aa18.09■□□□□ 0.49
KCNC1-213ENST00000640909 SH3RF1Q7Z6J0 888 aa18.09■□□□□ 0.49
KCNC1-213ENST00000640909 ZNF384Q8TF68 577 aa18.09■□□□□ 0.49
KCNC1-213ENST00000640909 HCN4Q9Y3Q4 1203 aa18.09■□□□□ 0.49
KCNC1-213ENST00000640909 XIRP2A4UGR9 3374 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms