RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 TTC14Q96N46 770 aa10.8□□□□□ -0.68
SCARB2-225ENST00000640900 NEK1Q96PY6 1258 aa10.8□□□□□ -0.68
SCARB2-225ENST00000640900 AGXT2Q9BYV1 514 aa10.8□□□□□ -0.68
SCARB2-225ENST00000640900 GLIS2Q9BZE0 524 aaPredicted RBP10.8□□□□□ -0.68
SCARB2-225ENST00000640900 CNNM2Q9H8M5 875 aa10.8□□□□□ -0.68
SCARB2-225ENST00000640900 GPBP1L1Q9HC44 474 aaPredicted RBP10.8□□□□□ -0.68
SCARB2-225ENST00000640900 TCP11L1Q9NUJ3 509 aa10.8□□□□□ -0.68
SCARB2-225ENST00000640900 ZSWIM5Q9P217 1185 aa10.8□□□□□ -0.68
SCARB2-225ENST00000640900 HMGB1P09429 215 aaKnown RBP10.79□□□□□ -0.68
SCARB2-225ENST00000640900 GUCY1A2P33402 732 aa10.79□□□□□ -0.68
SCARB2-225ENST00000640900 VASPP50552 380 aaPredicted RBP10.79□□□□□ -0.68
SCARB2-225ENST00000640900 JAG1P78504 1218 aa10.79□□□□□ -0.68
SCARB2-225ENST00000640900 PRAMEF18Q5VWM3 479 aa10.79□□□□□ -0.68
SCARB2-225ENST00000640900 MAP1SQ66K74 1059 aaPredicted RBP10.79□□□□□ -0.68
SCARB2-225ENST00000640900 DHX32Q7L7V1 743 aaKnown RBP10.79□□□□□ -0.68
SCARB2-225ENST00000640900 ZSCAN29Q8IWY8 852 aaPredicted RBP10.79□□□□□ -0.68
SCARB2-225ENST00000640900 ZNF784Q8NCA9 323 aaPredicted RBP10.79□□□□□ -0.68
SCARB2-225ENST00000640900 NEDD1Q8NHV4 660 aa10.79□□□□□ -0.68
SCARB2-225ENST00000640900 NCOA7Q8NI08 942 aa10.79□□□□□ -0.68
SCARB2-225ENST00000640900 ZNF526Q8TF50 670 aaPredicted RBP10.79□□□□□ -0.68
SCARB2-225ENST00000640900 KLRG1Q96E93 195 aa10.79□□□□□ -0.68
SCARB2-225ENST00000640900 CDCA5Q96FF9 252 aa10.79□□□□□ -0.68
SCARB2-225ENST00000640900 CCDC17Q96LX7 622 aa10.79□□□□□ -0.68
SCARB2-225ENST00000640900 KRT23Q9C075 422 aa10.79□□□□□ -0.68
SCARB2-225ENST00000640900 ZNF287Q9HBT7 754 aa10.79□□□□□ -0.68
SCARB2-225ENST00000640900 GINM1Q9NU53 330 aa10.79□□□□□ -0.68
SCARB2-225ENST00000640900 PASKQ96RG2 1323 aa10.79□□□□□ -0.68
SCARB2-225ENST00000640900 UNCXA6NJT0 531 aa10.78□□□□□ -0.68
SCARB2-225ENST00000640900 B4E1Z4 1266 aa10.78□□□□□ -0.68
SCARB2-225ENST00000640900 USP2O75604 605 aaPredicted RBP10.78□□□□□ -0.68
SCARB2-225ENST00000640900 PRKAR2AP13861 404 aaKnown RBP10.78□□□□□ -0.68
SCARB2-225ENST00000640900 RPS6KB1P23443 525 aa10.78□□□□□ -0.68
SCARB2-225ENST00000640900 YY1P25490 414 aa10.78□□□□□ -0.68
SCARB2-225ENST00000640900 PSMA5P28066 241 aa10.78□□□□□ -0.68
SCARB2-225ENST00000640900 EVCP57679 992 aa10.78□□□□□ -0.68
SCARB2-225ENST00000640900 SEC23AQ15436 765 aa10.78□□□□□ -0.68
SCARB2-225ENST00000640900 SLC4A8Q2Y0W8 1093 aa10.78□□□□□ -0.68
SCARB2-225ENST00000640900 NOL9Q5SY16 702 aaKnown RBP10.78□□□□□ -0.68
SCARB2-225ENST00000640900 LDLRAD1Q5T700 205 aa10.78□□□□□ -0.68
SCARB2-225ENST00000640900 RCSD1Q6JBY9 416 aa10.78□□□□□ -0.68
SCARB2-225ENST00000640900 RUFY3Q7L099 469 aa10.78□□□□□ -0.68
SCARB2-225ENST00000640900 CYB5R4Q7L1T6 521 aa10.78□□□□□ -0.68
SCARB2-225ENST00000640900 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.78□□□□□ -0.68
SCARB2-225ENST00000640900 RBM46Q8TBY0 533 aaKnown RBP10.78□□□□□ -0.68
SCARB2-225ENST00000640900 IGDCC4Q8TDY8 1250 aa10.78□□□□□ -0.68
SCARB2-225ENST00000640900 ESR2Q92731 530 aa10.78□□□□□ -0.68
SCARB2-225ENST00000640900 JAKMIP1Q96N16 626 aaKnown RBP10.78□□□□□ -0.68
SCARB2-225ENST00000640900 IL17RBQ9NRM6 502 aa10.78□□□□□ -0.68
SCARB2-225ENST00000640900 FAM196BA6NMK8 535 aa10.77□□□□□ -0.69
SCARB2-225ENST00000640900 CTNND1O60716 968 aaKnown RBP10.77□□□□□ -0.69
SCARB2-225ENST00000640900 KDM4AO75164 1064 aa10.77□□□□□ -0.69
SCARB2-225ENST00000640900 PRDM1O75626 825 aa10.77□□□□□ -0.69
SCARB2-225ENST00000640900 AKR1B1P15121 316 aa10.77□□□□□ -0.69
SCARB2-225ENST00000640900 CAP2P40123 477 aa10.77□□□□□ -0.69
SCARB2-225ENST00000640900 RABEP1Q15276 862 aa10.77□□□□□ -0.69
SCARB2-225ENST00000640900 CERKLQ49MI3 558 aaPredicted RBP10.77□□□□□ -0.69
SCARB2-225ENST00000640900 DCAF15Q66K64 600 aa10.77□□□□□ -0.69
SCARB2-225ENST00000640900 MIGA2Q7L4E1 593 aa10.77□□□□□ -0.69
SCARB2-225ENST00000640900 SIAH1Q8IUQ4 282 aa10.77□□□□□ -0.69
SCARB2-225ENST00000640900 ZNF341Q9BYN7 854 aa10.77□□□□□ -0.69
SCARB2-225ENST00000640900 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.77□□□□□ -0.69
SCARB2-225ENST00000640900 TRAF5O00463 557 aa10.76□□□□□ -0.69
SCARB2-225ENST00000640900 TOMM70O94826 608 aa10.76□□□□□ -0.69
SCARB2-225ENST00000640900 CASTP20810 708 aaKnown RBP10.76□□□□□ -0.69
SCARB2-225ENST00000640900 MCM5P33992 734 aa10.76□□□□□ -0.69
SCARB2-225ENST00000640900 FKBP1BP68106 108 aa10.76□□□□□ -0.69
SCARB2-225ENST00000640900 TFAP4Q01664 338 aa10.76□□□□□ -0.69
SCARB2-225ENST00000640900 TRDNQ13061 729 aa10.76□□□□□ -0.69
SCARB2-225ENST00000640900 SHROOM1Q2M3G4 852 aaPredicted RBP10.76□□□□□ -0.69
SCARB2-225ENST00000640900 CST9Q5W186 159 aa10.76□□□□□ -0.69
SCARB2-225ENST00000640900 BLOC1S2Q6QNY1 142 aa10.76□□□□□ -0.69
SCARB2-225ENST00000640900 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.76□□□□□ -0.69
SCARB2-225ENST00000640900 TMEM179Q6ZVK1 233 aa10.76□□□□□ -0.69
SCARB2-225ENST00000640900 SGMS1Q86VZ5 419 aa10.76□□□□□ -0.69
SCARB2-225ENST00000640900 ZNF444Q8N0Y2 327 aaPredicted RBP10.76□□□□□ -0.69
SCARB2-225ENST00000640900 CRACR2BQ8N4Y2 399 aaPredicted RBP10.76□□□□□ -0.69
SCARB2-225ENST00000640900 MKL1Q969V6 931 aa10.76□□□□□ -0.69
SCARB2-225ENST00000640900 TMEM87BQ96K49 555 aa10.76□□□□□ -0.69
SCARB2-225ENST00000640900 MKNK2Q9HBH9 465 aa10.76□□□□□ -0.69
SCARB2-225ENST00000640900 CYP46A1Q9Y6A2 500 aa10.76□□□□□ -0.69
SCARB2-225ENST00000640900 MYH8P13535 1937 aa10.76□□□□□ -0.69
SCARB2-225ENST00000640900 TRPM7Q96QT4 1865 aa10.75□□□□□ -0.69
SCARB2-225ENST00000640900 SH2B2O14492 632 aaPredicted RBP10.75□□□□□ -0.69
SCARB2-225ENST00000640900 PRC1O43663 620 aa10.75□□□□□ -0.69
SCARB2-225ENST00000640900 RANBP6O60518 1105 aaKnown RBP10.75□□□□□ -0.69
SCARB2-225ENST00000640900 CPA1P15085 419 aa10.75□□□□□ -0.69
SCARB2-225ENST00000640900 INPP5BP32019 993 aa10.75□□□□□ -0.69
SCARB2-225ENST00000640900 LIFRP42702 1097 aa10.75□□□□□ -0.69
SCARB2-225ENST00000640900 FMR1Q06787 632 aaKnown RBP eCLIP10.75□□□□□ -0.69
SCARB2-225ENST00000640900 FSTL1Q12841 308 aa10.75□□□□□ -0.69
SCARB2-225ENST00000640900 TOB2Q14106 344 aaPredicted RBP10.75□□□□□ -0.69
SCARB2-225ENST00000640900 FAM47AQ5JRC9 791 aa10.75□□□□□ -0.69
SCARB2-225ENST00000640900 RALYLQ86SE5 291 aaKnown RBP10.75□□□□□ -0.69
SCARB2-225ENST00000640900 DGKHQ86XP1 1220 aa10.75□□□□□ -0.69
SCARB2-225ENST00000640900 PIP4P2Q8N4L2 257 aa10.75□□□□□ -0.69
SCARB2-225ENST00000640900 ENAHQ8N8S7 591 aaPredicted RBP10.75□□□□□ -0.69
SCARB2-225ENST00000640900 SMC1BQ8NDV3 1235 aa10.75□□□□□ -0.69
SCARB2-225ENST00000640900 LY9Q9HBG7 655 aa10.75□□□□□ -0.69
SCARB2-225ENST00000640900 TSHZ2Q9NRE2 1034 aa10.75□□□□□ -0.69
SCARB2-225ENST00000640900 MTMR4Q9NYA4 1195 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms