RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.53■■□□□ 1.68
TSPAN9-208ENST00000640568 RANBP6O60518 1105 aaKnown RBP25.53■■□□□ 1.68
TSPAN9-208ENST00000640568 CAP2P40123 477 aa25.53■■□□□ 1.68
TSPAN9-208ENST00000640568 ABCB5Q2M3G0 1257 aa25.53■■□□□ 1.68
TSPAN9-208ENST00000640568 RALYLQ86SE5 291 aaKnown RBP25.53■■□□□ 1.68
TSPAN9-208ENST00000640568 CCDC17Q96LX7 622 aa25.53■■□□□ 1.68
TSPAN9-208ENST00000640568 KRT23Q9C075 422 aa25.53■■□□□ 1.68
TSPAN9-208ENST00000640568 INCENPQ9NQS7 918 aa25.53■■□□□ 1.68
TSPAN9-208ENST00000640568 ABT1Q9ULW3 272 aaKnown RBP25.53■■□□□ 1.68
TSPAN9-208ENST00000640568 NEDD4P46934 1319 aa25.52■■□□□ 1.68
TSPAN9-208ENST00000640568 TSPY2A6NKD2 308 aa25.52■■□□□ 1.68
TSPAN9-208ENST00000640568 E7EWF7 191 aa25.52■■□□□ 1.68
TSPAN9-208ENST00000640568 ORC4O43929 436 aa25.52■■□□□ 1.68
TSPAN9-208ENST00000640568 TSPY3P0CV98 308 aa25.52■■□□□ 1.68
TSPAN9-208ENST00000640568 TSPY8P0CW00 308 aa25.52■■□□□ 1.68
TSPAN9-208ENST00000640568 RASA1P20936 1047 aa25.52■■□□□ 1.68
TSPAN9-208ENST00000640568 APLP1P51693 650 aa25.52■■□□□ 1.68
TSPAN9-208ENST00000640568 KRT32Q14532 448 aa25.52■■□□□ 1.68
TSPAN9-208ENST00000640568 ZKSCAN4Q969J2 545 aaPredicted RBP25.52■■□□□ 1.68
TSPAN9-208ENST00000640568 PICK1Q9NRD5 415 aa25.52■■□□□ 1.68
TSPAN9-208ENST00000640568 FGRP09769 529 aa25.51■■□□□ 1.67
TSPAN9-208ENST00000640568 HUNKP57058 714 aa25.51■■□□□ 1.67
TSPAN9-208ENST00000640568 SCYL3Q8IZE3 742 aa25.51■■□□□ 1.67
TSPAN9-208ENST00000640568 NCOA7Q8NI08 942 aa25.51■■□□□ 1.67
TSPAN9-208ENST00000640568 ESR2Q92731 530 aa25.51■■□□□ 1.67
TSPAN9-208ENST00000640568 UNCXA6NJT0 531 aa25.5■■□□□ 1.67
TSPAN9-208ENST00000640568 ASNSP08243 561 aa25.5■■□□□ 1.67
TSPAN9-208ENST00000640568 AKR1B1P15121 316 aa25.5■■□□□ 1.67
TSPAN9-208ENST00000640568 NT5C2P49902 561 aa25.5■■□□□ 1.67
TSPAN9-208ENST00000640568 VGLL4Q14135 290 aa25.5■■□□□ 1.67
TSPAN9-208ENST00000640568 GINM1Q9NU53 330 aa25.5■■□□□ 1.67
TSPAN9-208ENST00000640568 TACC3Q9Y6A5 838 aa25.5■■□□□ 1.67
TSPAN9-208ENST00000640568 TAF6LQ9Y6J9 622 aa25.5■■□□□ 1.67
TSPAN9-208ENST00000640568 B4E1Z4 1266 aa25.49■■□□□ 1.67
TSPAN9-208ENST00000640568 GH2P01242 217 aa25.49■■□□□ 1.67
TSPAN9-208ENST00000640568 TFAP4Q01664 338 aa25.49■■□□□ 1.67
TSPAN9-208ENST00000640568 RRP1BQ14684 758 aaKnown RBP25.49■■□□□ 1.67
TSPAN9-208ENST00000640568 FAM47AQ5JRC9 791 aa25.49■■□□□ 1.67
TSPAN9-208ENST00000640568 NOL9Q5SY16 702 aaKnown RBP25.49■■□□□ 1.67
TSPAN9-208ENST00000640568 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.49■■□□□ 1.67
TSPAN9-208ENST00000640568 ZBTB21Q9ULJ3 1066 aa25.49■■□□□ 1.67
TSPAN9-208ENST00000640568 RAB3GAP1Q15042 981 aa25.48■■□□□ 1.67
TSPAN9-208ENST00000640568 LDLRAD1Q5T700 205 aa25.48■■□□□ 1.67
TSPAN9-208ENST00000640568 TMEM179Q6ZVK1 233 aa25.48■■□□□ 1.67
TSPAN9-208ENST00000640568 RASEFQ8IZ41 740 aa25.48■■□□□ 1.67
TSPAN9-208ENST00000640568 ELP3Q9H9T3 547 aa25.48■■□□□ 1.67
TSPAN9-208ENST00000640568 SNX14Q9Y5W7 946 aa25.48■■□□□ 1.67
TSPAN9-208ENST00000640568 TLL2Q9Y6L7 1015 aa25.48■■□□□ 1.67
TSPAN9-208ENST00000640568 GREB1LQ9C091 1923 aaPredicted RBP25.48■■□□□ 1.67
TSPAN9-208ENST00000640568 TSGA10IPQ3SY00 556 aa25.47■■□□□ 1.67
TSPAN9-208ENST00000640568 STOX1Q6ZVD7 989 aa25.47■■□□□ 1.67
TSPAN9-208ENST00000640568 SAPCD2Q86UD0 394 aa25.47■■□□□ 1.67
TSPAN9-208ENST00000640568 KCNB2Q92953 911 aa25.47■■□□□ 1.67
TSPAN9-208ENST00000640568 SLC10A4Q96EP9 437 aa25.47■■□□□ 1.67
TSPAN9-208ENST00000640568 KDM4AO75164 1064 aa25.47■■□□□ 1.67
TSPAN9-208ENST00000640568 CLMNQ96JQ2 1002 aa25.47■■□□□ 1.67
TSPAN9-208ENST00000640568 C22orf23Q9BZE7 217 aa25.47■■□□□ 1.67
TSPAN9-208ENST00000640568 CREBZFQ9NS37 354 aa25.47■■□□□ 1.67
TSPAN9-208ENST00000640568 SNCAIPQ9Y6H5 919 aa25.47■■□□□ 1.67
TSPAN9-208ENST00000640568 MYH4Q9Y623 1939 aa25.46■■□□□ 1.67
TSPAN9-208ENST00000640568 NEDD1Q8NHV4 660 aa25.46■■□□□ 1.67
TSPAN9-208ENST00000640568 NEK1Q96PY6 1258 aa25.46■■□□□ 1.67
TSPAN9-208ENST00000640568 PLIN4Q96Q06 1357 aa25.45■■□□□ 1.66
TSPAN9-208ENST00000640568 PSMA5P28066 241 aa25.45■■□□□ 1.66
TSPAN9-208ENST00000640568 ANAPC15P60006 121 aa25.45■■□□□ 1.66
TSPAN9-208ENST00000640568 SHROOM1Q2M3G4 852 aaPredicted RBP25.45■■□□□ 1.66
TSPAN9-208ENST00000640568 IQCA1Q86XH1 822 aa25.45■■□□□ 1.66
TSPAN9-208ENST00000640568 JAKMIP1Q96N16 626 aaKnown RBP25.45■■□□□ 1.66
TSPAN9-208ENST00000640568 AS3MTQ9HBK9 375 aa25.45■■□□□ 1.66
TSPAN9-208ENST00000640568 PHIPQ8WWQ0 1821 aa25.44■■□□□ 1.66
TSPAN9-208ENST00000640568 USP17L5A8MUK1 530 aa25.44■■□□□ 1.66
TSPAN9-208ENST00000640568 C1QTNF8P60827 252 aa25.44■■□□□ 1.66
TSPAN9-208ENST00000640568 SEPT2Q15019 361 aa25.44■■□□□ 1.66
TSPAN9-208ENST00000640568 PAXIP1Q6ZW49 1069 aaPredicted RBP25.44■■□□□ 1.66
TSPAN9-208ENST00000640568 PTPRAP18433 802 aa25.43■■□□□ 1.66
TSPAN9-208ENST00000640568 ZNF157P51786 506 aaPredicted RBP25.43■■□□□ 1.66
TSPAN9-208ENST00000640568 JAG1P78504 1218 aa25.43■■□□□ 1.66
TSPAN9-208ENST00000640568 PPP4R3BQ5MIZ7 849 aa25.43■■□□□ 1.66
TSPAN9-208ENST00000640568 RGMBQ6NW40 437 aa25.43■■□□□ 1.66
TSPAN9-208ENST00000640568 ERO1BQ86YB8 467 aa25.43■■□□□ 1.66
TSPAN9-208ENST00000640568 ZSWIM5Q9P217 1185 aa25.43■■□□□ 1.66
TSPAN9-208ENST00000640568 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.43■■□□□ 1.66
TSPAN9-208ENST00000640568 HMGB1P09429 215 aaKnown RBP25.42■■□□□ 1.66
TSPAN9-208ENST00000640568 ICA1Q05084 483 aa25.42■■□□□ 1.66
TSPAN9-208ENST00000640568 ADCK5Q3MIX3 580 aa25.42■■□□□ 1.66
TSPAN9-208ENST00000640568 OPTNQ96CV9 577 aa25.42■■□□□ 1.66
TSPAN9-208ENST00000640568 OTUD5Q96G74 571 aa25.42■■□□□ 1.66
TSPAN9-208ENST00000640568 UBAC1Q9BSL1 405 aa25.42■■□□□ 1.66
TSPAN9-208ENST00000640568 TBC1D2Q9BYX2 928 aa25.42■■□□□ 1.66
TSPAN9-208ENST00000640568 KANSL2Q9H9L4 492 aa25.42■■□□□ 1.66
TSPAN9-208ENST00000640568 SPDYE5A6NIY4 337 aa25.41■■□□□ 1.66
TSPAN9-208ENST00000640568 MCM5P33992 734 aa25.41■■□□□ 1.66
TSPAN9-208ENST00000640568 ATP2B2Q01814 1243 aa25.41■■□□□ 1.66
TSPAN9-208ENST00000640568 PPATQ06203 517 aa25.41■■□□□ 1.66
TSPAN9-208ENST00000640568 CCDC178Q5BJE1 867 aa25.41■■□□□ 1.66
TSPAN9-208ENST00000640568 BLOC1S2Q6QNY1 142 aa25.41■■□□□ 1.66
TSPAN9-208ENST00000640568 MB21D2Q8IYB1 491 aaPredicted RBP25.41■■□□□ 1.66
TSPAN9-208ENST00000640568 ZHX2Q9Y6X8 837 aa25.41■■□□□ 1.66
TSPAN9-208ENST00000640568 ERICH2A1L162 156 aa25.4■■□□□ 1.66
TSPAN9-208ENST00000640568 CASTP20810 708 aaKnown RBP25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms