RNA–Protein interactions for RNA: ENST00000640104.1

SPIN3-235, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,776 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-235ENST00000640104 NLRP12P59046 1061 aa15.37■□□□□ 0.05
SPIN3-235ENST00000640104 PPP2R5BQ15173 497 aa15.37■□□□□ 0.05
SPIN3-235ENST00000640104 MEX3CQ5U5Q3 659 aaKnown RBP15.37■□□□□ 0.05
SPIN3-235ENST00000640104 ISM2Q6H9L7 571 aa15.37■□□□□ 0.05
SPIN3-235ENST00000640104 KRI1Q8N9T8 703 aaKnown RBP15.37■□□□□ 0.05
SPIN3-235ENST00000640104 CNBD1Q8NA66 436 aa15.37■□□□□ 0.05
SPIN3-235ENST00000640104 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.37■□□□□ 0.05
SPIN3-235ENST00000640104 RBM6P78332 1123 aaKnown RBP15.37■□□□□ 0.05
SPIN3-235ENST00000640104 SLC4A8Q2Y0W8 1093 aa15.37■□□□□ 0.05
SPIN3-235ENST00000640104 RILPL1Q5EBL4 403 aa15.37■□□□□ 0.05
SPIN3-235ENST00000640104 SPECC1Q5M775 1068 aa15.37■□□□□ 0.05
SPIN3-235ENST00000640104 SHISA4Q96DD7 197 aa15.37■□□□□ 0.05
SPIN3-235ENST00000640104 ATP8A2Q9NTI2 1148 aa15.37■□□□□ 0.05
SPIN3-235ENST00000640104 VPS54Q9P1Q0 977 aa15.37■□□□□ 0.05
SPIN3-235ENST00000640104 FAM237AA0A1B0GTK4 181 aa15.36■□□□□ 0.05
SPIN3-235ENST00000640104 NMT2O60551 498 aa15.36■□□□□ 0.05
SPIN3-235ENST00000640104 ATP2B1P20020 1258 aa15.36■□□□□ 0.05
SPIN3-235ENST00000640104 GRAPQ13588 217 aa15.36■□□□□ 0.05
SPIN3-235ENST00000640104 FAM47AQ5JRC9 791 aa15.36■□□□□ 0.05
SPIN3-235ENST00000640104 GRAPLQ8TC17 118 aaPredicted RBP15.36■□□□□ 0.05
SPIN3-235ENST00000640104 FUT2Q10981 343 aa15.36■□□□□ 0.05
SPIN3-235ENST00000640104 TROAPQ12815 778 aa15.36■□□□□ 0.05
SPIN3-235ENST00000640104 PKN1Q16512 942 aa15.36■□□□□ 0.05
SPIN3-235ENST00000640104 BPIFA3Q9BQP9 254 aa15.36■□□□□ 0.05
SPIN3-235ENST00000640104 LRRC4BQ9NT99 713 aa15.36■□□□□ 0.05
SPIN3-235ENST00000640104 ARPP21Q9UBL0 812 aaPredicted RBP15.36■□□□□ 0.05
SPIN3-235ENST00000640104 KCNH3Q9ULD8 1083 aa15.36■□□□□ 0.05
SPIN3-235ENST00000640104 PCDHB6Q9Y5E3 794 aa15.36■□□□□ 0.05
SPIN3-235ENST00000640104 ORC4O43929 436 aa15.36■□□□□ 0.05
SPIN3-235ENST00000640104 GRIN1Q05586 938 aa15.36■□□□□ 0.05
SPIN3-235ENST00000640104 PNOCQ13519 176 aa15.36■□□□□ 0.05
SPIN3-235ENST00000640104 CACTINQ8WUQ7 758 aaKnown RBP15.36■□□□□ 0.05
SPIN3-235ENST00000640104 MAST2Q6P0Q8 1798 aa15.35■□□□□ 0.05
SPIN3-235ENST00000640104 LONRF3Q496Y0 759 aa15.35■□□□□ 0.05
SPIN3-235ENST00000640104 GPR101Q96P66 508 aaPredicted RBP15.35■□□□□ 0.05
SPIN3-235ENST00000640104 CABP5Q9NP86 173 aa15.35■□□□□ 0.05
SPIN3-235ENST00000640104 RBM28Q9NW13 759 aaKnown RBP15.35■□□□□ 0.05
SPIN3-235ENST00000640104 V9GY48 417 aaPredicted RBP15.35■□□□□ 0.05
SPIN3-235ENST00000640104 DDAH1O94760 285 aa15.35■□□□□ 0.05
SPIN3-235ENST00000640104 CALM1P0DP23 149 aa15.35■□□□□ 0.05
SPIN3-235ENST00000640104 CALM2P0DP24 149 aa15.35■□□□□ 0.05
SPIN3-235ENST00000640104 CALM3P0DP25 149 aa15.35■□□□□ 0.05
SPIN3-235ENST00000640104 XBP1P17861 261 aa15.35■□□□□ 0.05
SPIN3-235ENST00000640104 SPTY2D1Q68D10 685 aaPredicted RBP15.35■□□□□ 0.05
SPIN3-235ENST00000640104 CNNM3Q8NE01 707 aa15.35■□□□□ 0.05
SPIN3-235ENST00000640104 MCM9Q9NXL9 1143 aa15.35■□□□□ 0.05
SPIN3-235ENST00000640104 TUBE1Q9UJT0 475 aa15.35■□□□□ 0.05
SPIN3-235ENST00000640104 FBXO2Q9UK22 296 aaPredicted RBP15.35■□□□□ 0.05
SPIN3-235ENST00000640104 PRPF3O43395 683 aaKnown RBP15.34■□□□□ 0.05
SPIN3-235ENST00000640104 KRBA2Q6ZNG9 492 aa15.34■□□□□ 0.05
SPIN3-235ENST00000640104 METTL16Q86W50 562 aaKnown RBP15.34■□□□□ 0.05
SPIN3-235ENST00000640104 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.34■□□□□ 0.05
SPIN3-235ENST00000640104 FAM205CA6NFA0 338 aa15.34■□□□□ 0.05
SPIN3-235ENST00000640104 LDHBP07195 334 aaKnown RBP15.34■□□□□ 0.05
SPIN3-235ENST00000640104 USP17L8P0C7I0 530 aa15.34■□□□□ 0.05
SPIN3-235ENST00000640104 ARID5BQ14865 1188 aa15.34■□□□□ 0.05
SPIN3-235ENST00000640104 FILIP1Q7Z7B0 1213 aa15.34■□□□□ 0.05
SPIN3-235ENST00000640104 LEMD3Q9Y2U8 911 aa15.34■□□□□ 0.05
SPIN3-235ENST00000640104 LAMB1P07942 1786 aa15.34■□□□□ 0.05
SPIN3-235ENST00000640104 XDHP47989 1333 aa15.33■□□□□ 0.05
SPIN3-235ENST00000640104 TSPY2A6NKD2 308 aa15.33■□□□□ 0.04
SPIN3-235ENST00000640104 PTPREP23469 700 aa15.33■□□□□ 0.04
SPIN3-235ENST00000640104 PDE4BQ07343 736 aa15.33■□□□□ 0.04
SPIN3-235ENST00000640104 SBK1Q52WX2 424 aa15.33■□□□□ 0.04
SPIN3-235ENST00000640104 PRR5LQ6MZQ0 368 aa15.33■□□□□ 0.04
SPIN3-235ENST00000640104 TMTC3Q6ZXV5 915 aa15.33■□□□□ 0.04
SPIN3-235ENST00000640104 PHF20Q9BVI0 1012 aa15.33■□□□□ 0.04
SPIN3-235ENST00000640104 SBF2Q86WG5 1849 aa15.33■□□□□ 0.04
SPIN3-235ENST00000640104 AFF2P51816 1311 aa15.33■□□□□ 0.04
SPIN3-235ENST00000640104 CCDC88AQ3V6T2 1871 aa15.33■□□□□ 0.04
SPIN3-235ENST00000640104 KRT2P35908 639 aa15.33■□□□□ 0.04
SPIN3-235ENST00000640104 AEBP2Q6ZN18 517 aaPredicted RBP15.33■□□□□ 0.04
SPIN3-235ENST00000640104 SEPT12Q8IYM1 358 aa15.33■□□□□ 0.04
SPIN3-235ENST00000640104 CTCFLQ8NI51 663 aaPredicted RBP15.33■□□□□ 0.04
SPIN3-235ENST00000640104 WDR66Q8TBY9 1149 aa15.33■□□□□ 0.04
SPIN3-235ENST00000640104 FAM13BQ9NYF5 915 aa15.33■□□□□ 0.04
SPIN3-235ENST00000640104 DLEC1Q9Y238 1755 aa15.33■□□□□ 0.04
SPIN3-235ENST00000640104 KIAA1551Q9HCM1 1747 aa15.33■□□□□ 0.04
SPIN3-235ENST00000640104 MYH6P13533 1939 aa15.33■□□□□ 0.04
SPIN3-235ENST00000640104 USP5P45974 858 aa15.32■□□□□ 0.04
SPIN3-235ENST00000640104 NCAPHQ15003 741 aa15.32■□□□□ 0.04
SPIN3-235ENST00000640104 DIXDC1Q155Q3 683 aa15.32■□□□□ 0.04
SPIN3-235ENST00000640104 EARS2Q5JPH6 523 aaKnown RBP15.32■□□□□ 0.04
SPIN3-235ENST00000640104 RPGRQ92834 1020 aaKnown RBP15.32■□□□□ 0.04
SPIN3-235ENST00000640104 CEP131Q9UPN4 1083 aa15.32■□□□□ 0.04
SPIN3-235ENST00000640104 CNTNAP5Q8WYK1 1306 aa15.32■□□□□ 0.04
SPIN3-235ENST00000640104 FOXN1O15353 648 aa15.32■□□□□ 0.04
SPIN3-235ENST00000640104 SMC2O95347 1197 aa15.32■□□□□ 0.04
SPIN3-235ENST00000640104 TPM4P67936 248 aa15.32■□□□□ 0.04
SPIN3-235ENST00000640104 GRIK5Q16478 980 aa15.32■□□□□ 0.04
SPIN3-235ENST00000640104 TMED8Q6PL24 325 aaPredicted RBP15.32■□□□□ 0.04
SPIN3-235ENST00000640104 LRRC8AQ8IWT6 810 aa15.32■□□□□ 0.04
SPIN3-235ENST00000640104 SH3RF3Q8TEJ3 882 aaPredicted RBP15.32■□□□□ 0.04
SPIN3-235ENST00000640104 SMTNL1A8MU46 457 aa15.31■□□□□ 0.04
SPIN3-235ENST00000640104 ZNF804AQ7Z570 1209 aa15.31■□□□□ 0.04
SPIN3-235ENST00000640104 SRBD1Q8N5C6 995 aaKnown RBP15.31■□□□□ 0.04
SPIN3-235ENST00000640104 PRIMPOLQ96LW4 560 aa15.31■□□□□ 0.04
SPIN3-235ENST00000640104 GPSM2P81274 684 aa15.31■□□□□ 0.04
SPIN3-235ENST00000640104 FOXP4Q8IVH2 680 aaPredicted RBP15.31■□□□□ 0.04
SPIN3-235ENST00000640104 XPO4Q9C0E2 1151 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms