RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 SPDYE1Q8NFV5 336 aaPredicted RBP6.38□□□□□ -1.39
SCARB2-218ENST00000639715 KLHDC4Q8TBB5 520 aa6.38□□□□□ -1.39
SCARB2-218ENST00000639715 HAUS7Q99871 368 aa6.38□□□□□ -1.39
SCARB2-218ENST00000639715 SLC26A6Q9BXS9 759 aa6.38□□□□□ -1.39
SCARB2-218ENST00000639715 PTPRUQ92729 1446 aa6.38□□□□□ -1.39
SCARB2-218ENST00000639715 RNF40O75150 1001 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 WTAPQ15007 396 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 FAM173BQ6P4H8 233 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 TMEM87BQ96K49 555 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 BAG1Q99933 345 aaPredicted RBP6.37□□□□□ -1.39
SCARB2-218ENST00000639715 LUC7LQ9NQ29 371 aaKnown RBP6.37□□□□□ -1.39
SCARB2-218ENST00000639715 PHLPP1O60346 1717 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 ARHGEF28Q8N1W1 1705 aaKnown RBP6.37□□□□□ -1.39
SCARB2-218ENST00000639715 PFKFB2O60825 505 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 TAF5LO75529 589 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 TUBBP07437 444 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 PHKG2P15735 406 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 HSPA1LP34931 641 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 PRPHP41219 470 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 KARSQ15046 597 aaKnown RBP6.37□□□□□ -1.39
SCARB2-218ENST00000639715 WHAMMP3Q1A5X7 153 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 SOGA3Q5TF21 947 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 SLC30A9Q6PML9 568 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 ARL10Q8N8L6 244 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 CDK5RAP3Q96JB5 506 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 TSC22D3Q99576 134 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 KLC4Q9NSK0 619 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.37□□□□□ -1.39
SCARB2-218ENST00000639715 IFNKQ9P0W0 207 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 TECPR2O15040 1411 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 MYO1FO00160 1098 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 YEATS4O95619 227 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 CCNHP51946 323 aaPredicted RBP6.37□□□□□ -1.39
SCARB2-218ENST00000639715 SNX1Q13596 522 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 NECTIN1Q15223 517 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 RTN1Q16799 776 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 CCDC40Q4G0X9 1142 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 TTC6Q86TZ1 520 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 MYLK4Q86YV6 388 aaPredicted RBP6.37□□□□□ -1.39
SCARB2-218ENST00000639715 ESR2Q92731 530 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 CAPS2Q9BXY5 557 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 IMPACTQ9P2X3 320 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 SWAP70Q9UH65 585 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 OVOS2A0A0J9YW53 1432 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 OVOS2Q6IE36 1432 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 ATP10DQ9P241 1426 aa6.37□□□□□ -1.39
SCARB2-218ENST00000639715 PSDA5PKW4 1024 aaPredicted RBP6.36□□□□□ -1.39
SCARB2-218ENST00000639715 ERVV-2B6SEH9 535 aa6.36□□□□□ -1.39
SCARB2-218ENST00000639715 ADCK5Q3MIX3 580 aa6.36□□□□□ -1.39
SCARB2-218ENST00000639715 CCDC152Q4G0S7 254 aa6.36□□□□□ -1.39
SCARB2-218ENST00000639715 ODF2Q5BJF6 829 aa6.36□□□□□ -1.39
SCARB2-218ENST00000639715 IQCEQ6IPM2 695 aa6.36□□□□□ -1.39
SCARB2-218ENST00000639715 CCDC129Q6ZRS4 1044 aa6.36□□□□□ -1.39
SCARB2-218ENST00000639715 REXO1L1PQ8IX06 675 aa6.36□□□□□ -1.39
SCARB2-218ENST00000639715 GDAP1L1Q96MZ0 367 aa6.36□□□□□ -1.39
SCARB2-218ENST00000639715 ATG3Q9NT62 314 aa6.36□□□□□ -1.39
SCARB2-218ENST00000639715 AP5Z1O43299 807 aa6.36□□□□□ -1.39
SCARB2-218ENST00000639715 TPP2P29144 1249 aaPredicted RBP6.36□□□□□ -1.39
SCARB2-218ENST00000639715 LAMB3Q13751 1172 aa6.36□□□□□ -1.39
SCARB2-218ENST00000639715 PNMA8AQ86V59 439 aaPredicted RBP6.36□□□□□ -1.39
SCARB2-218ENST00000639715 CTAGE1Q96RT6 745 aa6.36□□□□□ -1.39
SCARB2-218ENST00000639715 TPX2Q9ULW0 747 aaKnown RBP6.36□□□□□ -1.39
SCARB2-218ENST00000639715 COL22A1Q8NFW1 1626 aaPredicted RBP6.36□□□□□ -1.39
SCARB2-218ENST00000639715 ROBO1Q9Y6N7 1651 aa6.36□□□□□ -1.39
SCARB2-218ENST00000639715 MYO1BO43795 1136 aa6.36□□□□□ -1.39
SCARB2-218ENST00000639715 RANBP6O60518 1105 aaKnown RBP6.36□□□□□ -1.39
SCARB2-218ENST00000639715 JAK2O60674 1132 aa6.36□□□□□ -1.39
SCARB2-218ENST00000639715 ZRANB2O95218 330 aaKnown RBP eCLIP6.36□□□□□ -1.39
SCARB2-218ENST00000639715 TUBB4BP68371 445 aa6.36□□□□□ -1.39
SCARB2-218ENST00000639715 MXRA7P84157 204 aa6.36□□□□□ -1.39
SCARB2-218ENST00000639715 SPAG1Q07617 926 aa6.36□□□□□ -1.39
SCARB2-218ENST00000639715 ANO1Q5XXA6 986 aa6.36□□□□□ -1.39
SCARB2-218ENST00000639715 PARD3BQ8TEW8 1205 aa6.36□□□□□ -1.39
SCARB2-218ENST00000639715 TMEM165Q9HC07 324 aa6.36□□□□□ -1.39
SCARB2-218ENST00000639715 ANGEL1Q9UNK9 670 aaKnown RBP6.36□□□□□ -1.39
SCARB2-218ENST00000639715 TADA3O75528 432 aa6.36□□□□□ -1.39
SCARB2-218ENST00000639715 CASP8Q14790 479 aa6.36□□□□□ -1.39
SCARB2-218ENST00000639715 ADALQ6DHV7 355 aa6.36□□□□□ -1.39
SCARB2-218ENST00000639715 NYAP1Q6ZVC0 841 aa6.36□□□□□ -1.39
SCARB2-218ENST00000639715 CCDC125Q86Z20 511 aa6.36□□□□□ -1.39
SCARB2-218ENST00000639715 TDRD7Q8NHU6 1098 aaKnown RBP6.36□□□□□ -1.39
SCARB2-218ENST00000639715 XAGE2Q96GT9 111 aa6.36□□□□□ -1.39
SCARB2-218ENST00000639715 PXDNLA1KZ92 1463 aa6.36□□□□□ -1.39
SCARB2-218ENST00000639715 CD163L1Q9NR16 1453 aa6.35□□□□□ -1.39
SCARB2-218ENST00000639715 E7EWF7 191 aa6.35□□□□□ -1.39
SCARB2-218ENST00000639715 H3BQF6 201 aa6.35□□□□□ -1.39
SCARB2-218ENST00000639715 OPA1O60313 960 aa6.35□□□□□ -1.39
SCARB2-218ENST00000639715 PPFIA3O75145 1194 aa6.35□□□□□ -1.39
SCARB2-218ENST00000639715 SASH3O75995 380 aa6.35□□□□□ -1.39
SCARB2-218ENST00000639715 CALM1P0DP23 149 aa6.35□□□□□ -1.39
SCARB2-218ENST00000639715 CALM2P0DP24 149 aa6.35□□□□□ -1.39
SCARB2-218ENST00000639715 CALM3P0DP25 149 aa6.35□□□□□ -1.39
SCARB2-218ENST00000639715 MARCKSP29966 332 aaPredicted RBP6.35□□□□□ -1.39
SCARB2-218ENST00000639715 MYL5Q02045 173 aa6.35□□□□□ -1.39
SCARB2-218ENST00000639715 IFT88Q13099 833 aa6.35□□□□□ -1.39
SCARB2-218ENST00000639715 INF2Q27J81 1249 aa6.35□□□□□ -1.39
SCARB2-218ENST00000639715 PROSER3Q2NL68 480 aa6.35□□□□□ -1.39
SCARB2-218ENST00000639715 SPECC1Q5M775 1068 aa6.35□□□□□ -1.39
SCARB2-218ENST00000639715 KLHL10Q6JEL2 608 aa6.35□□□□□ -1.39
SCARB2-218ENST00000639715 CHST3Q7LGC8 479 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms