RNA–Protein interactions for RNA: ENST00000637628.1

CHRNA4-220, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-220ENST00000637628 BRMS1Q9HCU9 246 aa4.11□□□□□ -1.75
CHRNA4-220ENST00000637628 OSGEPQ9NPF4 335 aa4.11□□□□□ -1.75
CHRNA4-220ENST00000637628 PRDM9Q9NQV7 894 aa4.11□□□□□ -1.75
CHRNA4-220ENST00000637628 SMC4Q9NTJ3 1288 aa4.11□□□□□ -1.75
CHRNA4-220ENST00000637628 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.11□□□□□ -1.75
CHRNA4-220ENST00000637628 CABP1Q9NZU7 370 aa4.11□□□□□ -1.75
CHRNA4-220ENST00000637628 DDX20Q9UHI6 824 aaKnown RBP4.11□□□□□ -1.75
CHRNA4-220ENST00000637628 PNMA8BQ9ULN7 279 aaPredicted RBP4.11□□□□□ -1.75
CHRNA4-220ENST00000637628 ANKRD6Q9Y2G4 727 aa4.11□□□□□ -1.75
CHRNA4-220ENST00000637628 USP3Q9Y6I4 520 aa4.11□□□□□ -1.75
CHRNA4-220ENST00000637628 A0A1W2PQH9 124 aa4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 FAM170AA1A519 330 aa4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 C9IYK1 514 aa4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 CDK2AP1O14519 115 aa4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 EREGO14944 169 aa4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 CLGNO14967 610 aa4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 MTA2O94776 668 aa4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 TFE3P19532 575 aaPredicted RBP4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 CYP2C19P33261 490 aa4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 IREB2P48200 963 aaKnown RBP4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 MMP16P51512 607 aa4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 HIRAP54198 1017 aaPredicted RBP4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 ZBED6P86452 979 aa4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 CLCQ05315 142 aa4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 MPP2Q14168 576 aa4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 SEPT2Q15019 361 aa4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 PCBP1Q15365 356 aaKnown RBP eCLIP4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 PDCD2Q16342 344 aaPredicted RBP4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 DOK7Q18PE1 504 aa4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 NBPF1Q3BBV0 1214 aa4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 INTS6LQ5JSJ4 861 aaKnown RBP4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 DACT2Q5SW24 774 aa4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 FOXB2Q5VYV0 432 aa4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 PTCRAQ6ISU1 281 aaPredicted RBP4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 PDE12Q6L8Q7 609 aaKnown RBP4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 C16orf54Q6UWD8 224 aa4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 LDHAL6AQ6ZMR3 332 aa4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 RUFY4Q6ZNE9 571 aa4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 CYP2U1Q7Z449 544 aa4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 TTC6Q86TZ1 520 aa4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 NDUFAF2Q8N183 169 aa4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 NKAPQ8N5F7 415 aaKnown RBP4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 C19orf47Q8N9M1 422 aaKnown RBP4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 SPATA5Q8NB90 893 aa4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 RBBP8NLQ8NC74 664 aaPredicted RBP4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 GLIS3Q8NEA6 775 aa4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 JARID2Q92833 1246 aaPredicted RBP4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 KISS1RQ969F8 398 aaPredicted RBP4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 EXOC2Q96KP1 924 aa4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 CENPOQ9BU64 300 aa4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 MRPL4Q9BYD3 311 aaKnown RBP4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 ELP3Q9H9T3 547 aa4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 RAB6BQ9NRW1 208 aa4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 TMEM63CQ9P1W3 806 aa4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 PGAP2Q9UHJ9 254 aa4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 FEZ2Q9UHY8 353 aaPredicted RBP4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 TSR3Q9UJK0 312 aaKnown RBP4.1□□□□□ -1.75
CHRNA4-220ENST00000637628 C19orf67A6NJJ6 358 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 UBAP1LF5GYI3 381 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 AGRPO00253 132 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 KPNA6O60684 536 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 MAP3K6O95382 1288 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 NPTXRO95502 500 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 MT-CO1P00395 513 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 GNRH1P01148 92 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 ECE1P42892 770 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 GTF2H3Q13889 308 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 TEAD4Q15561 434 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 SLC10A6Q3KNW5 377 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 GLIPR1L2Q4G1C9 344 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 ATP13A4Q4VNC1 1196 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 FAM209AQ5JX71 171 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 KIAA0319Q5VV43 1072 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 FAM180BQ6P0A1 224 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 VHLLQ6RSH7 139 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 POTEAQ6S8J7 498 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 AGMOQ6ZNB7 445 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 EPM2AIP1Q7L775 607 aaPredicted RBP4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 OTOP3Q7RTS5 596 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 TRIM42Q8IWZ5 723 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 TRMT44Q8IYL2 757 aaKnown RBP4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 ZNF511Q8NB15 262 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 NAXEQ8NCW5 288 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 ZDHHC1Q8WTX9 485 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 GATAD2BQ8WXI9 593 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 GOLGA1Q92805 767 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 L3MBTL2Q969R5 705 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 PAWRQ96IZ0 340 aaKnown RBP4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 C1QTNF2Q9BXJ5 285 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 AP1M1Q9BXS5 423 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 CEP44Q9C0F1 390 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 IFT22Q9H7X7 185 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 KIAA1586Q9HCI6 787 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 KMT5AQ9NQR1 393 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 DDX21Q9NR30 783 aaKnown RBP eCLIP4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 SH3GLB2Q9NR46 395 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 SUCOQ9UBS9 1254 aaKnown RBP4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 ACAD8Q9UKU7 415 aa4.09□□□□□ -1.75
CHRNA4-220ENST00000637628 APOBEC2Q9Y235 224 aaKnown RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms