RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 SMARCC2Q8TAQ2 1214 aa6.32□□□□□ -1.4
CHD2-227ENST00000637572 TRIM5Q9C035 493 aa6.32□□□□□ -1.4
CHD2-227ENST00000637572 RMND1Q9NWS8 449 aa6.32□□□□□ -1.4
CHD2-227ENST00000637572 USP17L12C9JPN9 530 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 USP17L21D6R901 530 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 DDAH1O94760 285 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 MMP14P50281 582 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 HTRA3P83110 453 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 ITPK1Q13572 414 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 EPHA10Q5JZY3 1008 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 SLC10A5Q5PT55 438 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 GALNT17Q6IS24 598 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 PI4K2BQ8TCG2 481 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 LRRC2Q9BYS8 371 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 TAOK3Q9H2K8 898 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 OFD1O75665 1012 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 GUCY1B3Q02153 619 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 KLHL40Q2TBA0 621 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 SH3D19Q5HYK7 790 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 CNNM3Q8NE01 707 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 CHURC1Q8WUH1 139 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 PHOX2BQ99453 314 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 TSG101Q99816 390 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 DNAI2Q9GZS0 605 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 JAG2Q9Y219 1238 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 NTSR2O95665 410 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 FGAP02671 866 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 SSBP05455 408 aaKnown RBP eCLIP6.31□□□□□ -1.4
CHD2-227ENST00000637572 RFC5P40937 340 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 CCDC173Q0VFZ6 552 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 STYK1Q6J9G0 422 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 MAPKAPK5Q8IW41 473 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 LSG1Q9H089 658 aaKnown RBP6.31□□□□□ -1.4
CHD2-227ENST00000637572 ZNHIT6Q9NWK9 470 aaKnown RBP6.31□□□□□ -1.4
CHD2-227ENST00000637572 RIPOR2Q9Y4F9 1068 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 NFAT5O94916 1531 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 TFAP4Q01664 338 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 PABPC4Q13310 644 aaKnown RBP eCLIP6.31□□□□□ -1.4
CHD2-227ENST00000637572 MYSM1Q5VVJ2 828 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 CIAPIN1Q6FI81 312 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 INTS5Q6P9B9 1019 aaKnown RBP6.31□□□□□ -1.4
CHD2-227ENST00000637572 FSIP1Q8NA03 581 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 TCEANC2Q96MN5 208 aa6.31□□□□□ -1.4
CHD2-227ENST00000637572 SAP30BPQ9UHR5 308 aaKnown RBP6.31□□□□□ -1.4
CHD2-227ENST00000637572 ARID4AP29374 1257 aaPredicted RBP6.3□□□□□ -1.4
CHD2-227ENST00000637572 SLC1A4P43007 532 aa6.3□□□□□ -1.4
CHD2-227ENST00000637572 RASGRF1Q13972 1273 aa6.3□□□□□ -1.4
CHD2-227ENST00000637572 RAB3GAP1Q15042 981 aa6.3□□□□□ -1.4
CHD2-227ENST00000637572 SKIV2LQ15477 1246 aaKnown RBP6.3□□□□□ -1.4
CHD2-227ENST00000637572 SUPT20HL1Q3ZLR7 823 aa6.3□□□□□ -1.4
CHD2-227ENST00000637572 CCDC70Q6NSX1 233 aa6.3□□□□□ -1.4
CHD2-227ENST00000637572 ZSCAN10Q96SZ4 725 aaPredicted RBP6.3□□□□□ -1.4
CHD2-227ENST00000637572 TRAIPQ9BWF2 469 aa6.3□□□□□ -1.4
CHD2-227ENST00000637572 SERPINC1P01008 464 aa6.3□□□□□ -1.4
CHD2-227ENST00000637572 TOP1P11387 765 aaKnown RBP6.3□□□□□ -1.4
CHD2-227ENST00000637572 PRR5LQ6MZQ0 368 aa6.3□□□□□ -1.4
CHD2-227ENST00000637572 FOXP4Q8IVH2 680 aaPredicted RBP6.3□□□□□ -1.4
CHD2-227ENST00000637572 hCG_1984214I3L0E3 225 aa6.3□□□□□ -1.4
CHD2-227ENST00000637572 PTGDRQ13258 359 aa6.3□□□□□ -1.4
CHD2-227ENST00000637572 DOK7Q18PE1 504 aa6.3□□□□□ -1.4
CHD2-227ENST00000637572 WDR78Q5VTH9 848 aa6.3□□□□□ -1.4
CHD2-227ENST00000637572 KRT25Q7Z3Z0 450 aa6.3□□□□□ -1.4
CHD2-227ENST00000637572 KIAA0825Q8IV33 1275 aa6.3□□□□□ -1.4
CHD2-227ENST00000637572 ZNF713Q8N859 430 aaPredicted RBP6.3□□□□□ -1.4
CHD2-227ENST00000637572 MRPS27Q92552 414 aaKnown RBP6.3□□□□□ -1.4
CHD2-227ENST00000637572 ZHX3Q9H4I2 956 aa6.3□□□□□ -1.4
CHD2-227ENST00000637572 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.3□□□□□ -1.4
CHD2-227ENST00000637572 CD209Q9NNX6 404 aa6.3□□□□□ -1.4
CHD2-227ENST00000637572 TLR7Q9NYK1 1049 aaKnown RBP6.3□□□□□ -1.4
CHD2-227ENST00000637572 CSADQ9Y600 493 aa6.3□□□□□ -1.4
CHD2-227ENST00000637572 WDR19Q8NEZ3 1342 aa6.29□□□□□ -1.4
CHD2-227ENST00000637572 ZBED4O75132 1171 aa6.29□□□□□ -1.4
CHD2-227ENST00000637572 SEC24BO95487 1268 aa6.29□□□□□ -1.4
CHD2-227ENST00000637572 PPP1R2P41236 205 aa6.29□□□□□ -1.4
CHD2-227ENST00000637572 ALX1Q15699 326 aa6.29□□□□□ -1.4
CHD2-227ENST00000637572 GPATCH4Q5T3I0 446 aaKnown RBP6.29□□□□□ -1.4
CHD2-227ENST00000637572 SULF1Q8IWU6 871 aa6.29□□□□□ -1.4
CHD2-227ENST00000637572 DCPSQ96C86 337 aaKnown RBP6.29□□□□□ -1.4
CHD2-227ENST00000637572 ATP6V0A2Q9Y487 856 aa6.29□□□□□ -1.4
CHD2-227ENST00000637572 CAMTA1Q9Y6Y1 1673 aa6.29□□□□□ -1.4
CHD2-227ENST00000637572 AKAP12Q02952 1782 aa6.29□□□□□ -1.4
CHD2-227ENST00000637572 SPTLC2O15270 562 aa6.29□□□□□ -1.4
CHD2-227ENST00000637572 EVI5O60447 810 aa6.29□□□□□ -1.4
CHD2-227ENST00000637572 PFKFB2O60825 505 aa6.29□□□□□ -1.4
CHD2-227ENST00000637572 DKC1O60832 514 aaKnown RBP eCLIP6.29□□□□□ -1.4
CHD2-227ENST00000637572 RCAN1P53805 252 aa6.29□□□□□ -1.4
CHD2-227ENST00000637572 SLC4A8Q2Y0W8 1093 aa6.29□□□□□ -1.4
CHD2-227ENST00000637572 PPFIBP1Q86W92 1011 aa6.29□□□□□ -1.4
CHD2-227ENST00000637572 CELF1Q92879 486 aaKnown RBP6.29□□□□□ -1.4
CHD2-227ENST00000637572 GTF3C6Q969F1 213 aa6.29□□□□□ -1.4
CHD2-227ENST00000637572 EDC3Q96F86 508 aaKnown RBP6.29□□□□□ -1.4
CHD2-227ENST00000637572 TRIM21P19474 475 aaKnown RBP6.29□□□□□ -1.4
CHD2-227ENST00000637572 SYT1P21579 422 aa6.29□□□□□ -1.4
CHD2-227ENST00000637572 SYKP43405 635 aa6.29□□□□□ -1.4
CHD2-227ENST00000637572 CERKLQ49MI3 558 aaPredicted RBP6.29□□□□□ -1.4
CHD2-227ENST00000637572 FAM114A1Q8IWE2 563 aa6.29□□□□□ -1.4
CHD2-227ENST00000637572 ZNF654Q8IZM8 581 aa6.29□□□□□ -1.4
CHD2-227ENST00000637572 RGS22Q8NE09 1264 aa6.29□□□□□ -1.4
CHD2-227ENST00000637572 PRM3Q9NNZ6 103 aa6.29□□□□□ -1.4
CHD2-227ENST00000637572 PI4KBQ9UBF8 816 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms