RNA–Protein interactions for RNA: ENST00000637552.1

CHRNA7-229, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-229ENST00000637552 GCLCP48506 637 aaPredicted RBP27.72■■■□□ 2.03
CHRNA7-229ENST00000637552 FLT3LGP49771 235 aa27.72■■■□□ 2.03
CHRNA7-229ENST00000637552 MTMR2Q13614 643 aa27.72■■■□□ 2.03
CHRNA7-229ENST00000637552 TTF1Q15361 905 aaPredicted RBP27.72■■■□□ 2.03
CHRNA7-229ENST00000637552 BCL11AQ9H165 835 aa27.72■■■□□ 2.03
CHRNA7-229ENST00000637552 ADCY3O60266 1144 aa27.71■■■□□ 2.03
CHRNA7-229ENST00000637552 IFIT2P09913 472 aaKnown RBP27.71■■■□□ 2.03
CHRNA7-229ENST00000637552 NKX2-3Q8TAU0 364 aa27.71■■■□□ 2.03
CHRNA7-229ENST00000637552 COA7Q96BR5 231 aa27.71■■■□□ 2.03
CHRNA7-229ENST00000637552 ASCC2Q9H1I8 757 aaPredicted RBP27.71■■■□□ 2.03
CHRNA7-229ENST00000637552 ZBTB21Q9ULJ3 1066 aa27.71■■■□□ 2.03
CHRNA7-229ENST00000637552 CEP290O15078 2479 aa27.7■■■□□ 2.03
CHRNA7-229ENST00000637552 CCL5P13501 91 aa27.7■■■□□ 2.02
CHRNA7-229ENST00000637552 BACE1P56817 501 aa27.7■■■□□ 2.02
CHRNA7-229ENST00000637552 IRX3P78415 501 aaPredicted RBP27.7■■■□□ 2.02
CHRNA7-229ENST00000637552 GCC1Q96CN9 775 aa27.7■■■□□ 2.02
CHRNA7-229ENST00000637552 JAG1P78504 1218 aa27.69■■■□□ 2.02
CHRNA7-229ENST00000637552 SIRT2Q8IXJ6 389 aa27.69■■■□□ 2.02
CHRNA7-229ENST00000637552 RNF208Q9H0X6 261 aa27.69■■■□□ 2.02
CHRNA7-229ENST00000637552 TAOK2Q9UL54 1235 aa27.69■■■□□ 2.02
CHRNA7-229ENST00000637552 C19orf81C9J6K1 198 aa27.68■■■□□ 2.02
CHRNA7-229ENST00000637552 USP17L10C9JJH3 530 aa27.68■■■□□ 2.02
CHRNA7-229ENST00000637552 RAB11FIP3O75154 756 aa27.68■■■□□ 2.02
CHRNA7-229ENST00000637552 SHROOM1Q2M3G4 852 aaPredicted RBP27.68■■■□□ 2.02
CHRNA7-229ENST00000637552 DNAJC2Q99543 621 aaKnown RBP27.68■■■□□ 2.02
CHRNA7-229ENST00000637552 SERPINB13Q9UIV8 391 aa27.68■■■□□ 2.02
CHRNA7-229ENST00000637552 DOCK3Q8IZD9 2030 aa27.68■■■□□ 2.02
CHRNA7-229ENST00000637552 GJB1P08034 283 aa27.67■■■□□ 2.02
CHRNA7-229ENST00000637552 IRF5Q13568 498 aa27.67■■■□□ 2.02
CHRNA7-229ENST00000637552 SLC9C2Q5TAH2 1124 aa27.67■■■□□ 2.02
CHRNA7-229ENST00000637552 TTC6Q86TZ1 520 aa27.67■■■□□ 2.02
CHRNA7-229ENST00000637552 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.67■■■□□ 2.02
CHRNA7-229ENST00000637552 MAGEB6P1A0A0J9YX57 407 aa27.66■■■□□ 2.02
CHRNA7-229ENST00000637552 GOLIM4O00461 696 aa27.66■■■□□ 2.02
CHRNA7-229ENST00000637552 ELNP15502 786 aa27.66■■■□□ 2.02
CHRNA7-229ENST00000637552 PXYLP1Q8TE99 480 aa27.66■■■□□ 2.02
CHRNA7-229ENST00000637552 SHISA4Q96DD7 197 aa27.66■■■□□ 2.02
CHRNA7-229ENST00000637552 EHD4Q9H223 541 aa27.66■■■□□ 2.02
CHRNA7-229ENST00000637552 GH2P01242 217 aa27.65■■■□□ 2.02
CHRNA7-229ENST00000637552 PDE6AP16499 860 aa27.65■■■□□ 2.02
CHRNA7-229ENST00000637552 GJA8P48165 433 aa27.65■■■□□ 2.02
CHRNA7-229ENST00000637552 RIOK1Q9BRS2 568 aaKnown RBP27.65■■■□□ 2.02
CHRNA7-229ENST00000637552 NAV1Q8NEY1 1877 aa27.65■■■□□ 2.02
CHRNA7-229ENST00000637552 INHAP05111 366 aa27.64■■■□□ 2.02
CHRNA7-229ENST00000637552 CRNKL1Q9BZJ0 848 aaKnown RBP27.64■■■□□ 2.02
CHRNA7-229ENST00000637552 UNC93B1Q9H1C4 597 aa27.64■■■□□ 2.02
CHRNA7-229ENST00000637552 HOXA7P31268 230 aaPredicted RBP27.63■■■□□ 2.01
CHRNA7-229ENST00000637552 TATDN1Q6P1N9 297 aa27.63■■■□□ 2.01
CHRNA7-229ENST00000637552 FEZ1Q99689 392 aa27.63■■■□□ 2.01
CHRNA7-229ENST00000637552 ZNF532Q9HCE3 1301 aa27.63■■■□□ 2.01
CHRNA7-229ENST00000637552 DDX60LQ5H9U9 1706 aaKnown RBP27.62■■■□□ 2.01
CHRNA7-229ENST00000637552 POLR3DP05423 398 aaPredicted RBP27.62■■■□□ 2.01
CHRNA7-229ENST00000637552 MORF4L1Q9UBU8 362 aa27.62■■■□□ 2.01
CHRNA7-229ENST00000637552 HERVK_113P62684 666 aa27.61■■■□□ 2.01
CHRNA7-229ENST00000637552 PDE3AQ14432 1141 aa27.61■■■□□ 2.01
CHRNA7-229ENST00000637552 RAB3GAP1Q15042 981 aa27.61■■■□□ 2.01
CHRNA7-229ENST00000637552 CERKLQ49MI3 558 aaPredicted RBP27.61■■■□□ 2.01
CHRNA7-229ENST00000637552 USP17L2Q6R6M4 530 aa27.61■■■□□ 2.01
CHRNA7-229ENST00000637552 U2AF1L4Q8WU68 220 aaKnown RBP27.61■■■□□ 2.01
CHRNA7-229ENST00000637552 P2RX7Q99572 595 aaKnown RBP27.61■■■□□ 2.01
CHRNA7-229ENST00000637552 ABCB5Q2M3G0 1257 aa27.6■■■□□ 2.01
CHRNA7-229ENST00000637552 EDC3Q96F86 508 aaKnown RBP27.6■■■□□ 2.01
CHRNA7-229ENST00000637552 CABP5Q9NP86 173 aa27.6■■■□□ 2.01
CHRNA7-229ENST00000637552 PAG1Q9NWQ8 432 aa27.6■■■□□ 2.01
CHRNA7-229ENST00000637552 PLCD1P51178 756 aa27.59■■■□□ 2.01
CHRNA7-229ENST00000637552 ZYXQ15942 572 aaKnown RBP27.59■■■□□ 2.01
CHRNA7-229ENST00000637552 C20orf194Q5TEA3 1177 aa27.59■■■□□ 2.01
CHRNA7-229ENST00000637552 BOLA2Q9H3K6 86 aa27.59■■■□□ 2.01
CHRNA7-229ENST00000637552 EMILIN3Q9NT22 766 aa27.59■■■□□ 2.01
CHRNA7-229ENST00000637552 MCM9Q9NXL9 1143 aa27.59■■■□□ 2.01
CHRNA7-229ENST00000637552 GPRC5AQ8NFJ5 357 aa27.58■■■□□ 2.01
CHRNA7-229ENST00000637552 GTF3C2Q8WUA4 911 aaPredicted RBP27.58■■■□□ 2.01
CHRNA7-229ENST00000637552 TCRBV5S4A2TA0A5A2 114 aa27.57■■■□□ 2
CHRNA7-229ENST00000637552 ATP5JP18859 108 aa27.57■■■□□ 2
CHRNA7-229ENST00000637552 SHMT1P34896 483 aa27.57■■■□□ 2
CHRNA7-229ENST00000637552 USP14P54578 494 aa27.57■■■□□ 2
CHRNA7-229ENST00000637552 LCORLQ8N3X6 602 aa27.57■■■□□ 2
CHRNA7-229ENST00000637552 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.57■■■□□ 2
CHRNA7-229ENST00000637552 FARP2O94887 1054 aaPredicted RBP27.56■■■□□ 2
CHRNA7-229ENST00000637552 SGPL1O95470 568 aa27.56■■■□□ 2
CHRNA7-229ENST00000637552 HMGCRP04035 888 aa27.56■■■□□ 2
CHRNA7-229ENST00000637552 CCAR1Q8IX12 1150 aaKnown RBP27.56■■■□□ 2
CHRNA7-229ENST00000637552 SDR42E1Q8WUS8 393 aa27.56■■■□□ 2
CHRNA7-229ENST00000637552 DPF3Q92784 378 aa27.56■■■□□ 2
CHRNA7-229ENST00000637552 C12orf42Q96LP6 360 aa27.56■■■□□ 2
CHRNA7-229ENST00000637552 DEFB118Q96PH6 123 aa27.56■■■□□ 2
CHRNA7-229ENST00000637552 PAGR1Q9BTK6 254 aa27.56■■■□□ 2
CHRNA7-229ENST00000637552 HTATIP2Q9BUP3 242 aa27.56■■■□□ 2
CHRNA7-229ENST00000637552 LRRCC1Q9C099 1032 aa27.56■■■□□ 2
CHRNA7-229ENST00000637552 TXNRD2Q9NNW7 524 aa27.56■■■□□ 2
CHRNA7-229ENST00000637552 HABP4Q5JVS0 413 aaKnown RBP27.55■■■□□ 2
CHRNA7-229ENST00000637552 GJD2Q9UKL4 321 aa27.55■■■□□ 2
CHRNA7-229ENST00000637552 PEX10O60683 326 aa27.54■■■□□ 2
CHRNA7-229ENST00000637552 TFRCP02786 760 aaKnown RBP27.54■■■□□ 2
CHRNA7-229ENST00000637552 HAUS7Q99871 368 aa27.54■■■□□ 2
CHRNA7-229ENST00000637552 KIAA1683Q9H0B3 1180 aa27.54■■■□□ 2
CHRNA7-229ENST00000637552 ARMT1Q9H993 441 aa27.54■■■□□ 2
CHRNA7-229ENST00000637552 DCP1AQ9NPI6 582 aaPredicted RBP27.54■■■□□ 2
CHRNA7-229ENST00000637552 PAK6Q9NQU5 681 aaPredicted RBP27.54■■■□□ 2
CHRNA7-229ENST00000637552 RBPJLQ9UBG7 517 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms