RNA–Protein interactions for RNA: ENST00000637387.1

CTSD-211, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-211ENST00000637387 TMEM88BA6NKF7 163 aa17.98■□□□□ 0.47
CTSD-211ENST00000637387 NPM3O75607 178 aaKnown RBP17.98■□□□□ 0.47
CTSD-211ENST00000637387 PDE4BQ07343 736 aa17.98■□□□□ 0.47
CTSD-211ENST00000637387 TMEM67Q5HYA8 995 aa17.98■□□□□ 0.47
CTSD-211ENST00000637387 TNKSO95271 1327 aa17.98■□□□□ 0.47
CTSD-211ENST00000637387 ATRNL1Q5VV63 1379 aa17.98■□□□□ 0.47
CTSD-211ENST00000637387 MYH4Q9Y623 1939 aa17.98■□□□□ 0.47
CTSD-211ENST00000637387 SLC3A2P08195 630 aaKnown RBP17.97■□□□□ 0.47
CTSD-211ENST00000637387 RASA1P20936 1047 aa17.97■□□□□ 0.47
CTSD-211ENST00000637387 APOA5Q6Q788 366 aa17.97■□□□□ 0.47
CTSD-211ENST00000637387 SH3BP5LQ7L8J4 393 aa17.97■□□□□ 0.47
CTSD-211ENST00000637387 AMOTL1Q8IY63 956 aa17.97■□□□□ 0.47
CTSD-211ENST00000637387 PGAP2Q9UHJ9 254 aa17.97■□□□□ 0.47
CTSD-211ENST00000637387 HDAC9Q9UKV0 1011 aa17.97■□□□□ 0.47
CTSD-211ENST00000637387 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.97■□□□□ 0.47
CTSD-211ENST00000637387 IFIT3O14879 490 aaKnown RBP17.96■□□□□ 0.47
CTSD-211ENST00000637387 RANBP6O60518 1105 aaKnown RBP17.96■□□□□ 0.47
CTSD-211ENST00000637387 CTDNEP1O95476 244 aa17.96■□□□□ 0.47
CTSD-211ENST00000637387 ZNF280AP59817 542 aaPredicted RBP17.96■□□□□ 0.47
CTSD-211ENST00000637387 RAB3GAP1Q15042 981 aa17.96■□□□□ 0.47
CTSD-211ENST00000637387 FAM47AQ5JRC9 791 aa17.96■□□□□ 0.47
CTSD-211ENST00000637387 ENAHQ8N8S7 591 aaPredicted RBP17.96■□□□□ 0.47
CTSD-211ENST00000637387 DPF2Q92785 391 aa17.96■□□□□ 0.47
CTSD-211ENST00000637387 NCOA5Q9HCD5 579 aaKnown RBP17.96■□□□□ 0.47
CTSD-211ENST00000637387 ZDHHC9Q9Y397 364 aa17.96■□□□□ 0.47
CTSD-211ENST00000637387 CNTNAP1P78357 1384 aa17.96■□□□□ 0.47
CTSD-211ENST00000637387 PLIN4Q96Q06 1357 aa17.96■□□□□ 0.46
CTSD-211ENST00000637387 GOLGA8BA8MQT2 603 aa17.96■□□□□ 0.46
CTSD-211ENST00000637387 RPS12P25398 132 aaKnown RBP17.96■□□□□ 0.46
CTSD-211ENST00000637387 CDK8P49336 464 aa17.96■□□□□ 0.46
CTSD-211ENST00000637387 HIRAP54198 1017 aaPredicted RBP17.96■□□□□ 0.46
CTSD-211ENST00000637387 RAB11FIP4Q86YS3 637 aa17.96■□□□□ 0.46
CTSD-211ENST00000637387 SMARCC2Q8TAQ2 1214 aa17.96■□□□□ 0.46
CTSD-211ENST00000637387 ZSCAN10Q96SZ4 725 aaPredicted RBP17.96■□□□□ 0.46
CTSD-211ENST00000637387 ATAD5Q96QE3 1844 aa17.95■□□□□ 0.46
CTSD-211ENST00000637387 DDTLA6NHG4 134 aaPredicted RBP17.95■□□□□ 0.46
CTSD-211ENST00000637387 NMT2O60551 498 aa17.95■□□□□ 0.46
CTSD-211ENST00000637387 JAK2O60674 1132 aa17.95■□□□□ 0.46
CTSD-211ENST00000637387 EGFRP00533 1210 aa17.95■□□□□ 0.46
CTSD-211ENST00000637387 GJB2P29033 226 aa17.95■□□□□ 0.46
CTSD-211ENST00000637387 NT5C2P49902 561 aa17.95■□□□□ 0.46
CTSD-211ENST00000637387 CCT2P78371 535 aaKnown RBP17.95■□□□□ 0.46
CTSD-211ENST00000637387 SPDYE2Q495Y8 402 aa17.95■□□□□ 0.46
CTSD-211ENST00000637387 RCSD1Q6JBY9 416 aa17.95■□□□□ 0.46
CTSD-211ENST00000637387 OGFOD1Q8N543 542 aa17.95■□□□□ 0.46
CTSD-211ENST00000637387 NSUN7Q8NE18 718 aaKnown RBP17.95■□□□□ 0.46
CTSD-211ENST00000637387 DNAJC18Q9H819 358 aa17.95■□□□□ 0.46
CTSD-211ENST00000637387 CNOT7Q9UIV1 285 aaKnown RBP17.95■□□□□ 0.46
CTSD-211ENST00000637387 SLURP2P0DP57 97 aa17.94■□□□□ 0.46
CTSD-211ENST00000637387 FMR1Q06787 632 aaKnown RBP eCLIP17.94■□□□□ 0.46
CTSD-211ENST00000637387 TCP10Q12799 353 aa17.94■□□□□ 0.46
CTSD-211ENST00000637387 WTAPQ15007 396 aa17.94■□□□□ 0.46
CTSD-211ENST00000637387 DLGAP5Q15398 846 aa17.94■□□□□ 0.46
CTSD-211ENST00000637387 TTC6Q86TZ1 520 aa17.94■□□□□ 0.46
CTSD-211ENST00000637387 UBAC1Q9BSL1 405 aa17.94■□□□□ 0.46
CTSD-211ENST00000637387 EHD4Q9H223 541 aa17.94■□□□□ 0.46
CTSD-211ENST00000637387 IL17RBQ9NRM6 502 aa17.94■□□□□ 0.46
CTSD-211ENST00000637387 ZNF70Q9UC06 446 aaPredicted RBP17.94■□□□□ 0.46
CTSD-211ENST00000637387 SMC3Q9UQE7 1217 aa17.94■□□□□ 0.46
CTSD-211ENST00000637387 TCHHQ07283 1943 aa17.94■□□□□ 0.46
CTSD-211ENST00000637387 CLRN2A0PK11 232 aa17.93■□□□□ 0.46
CTSD-211ENST00000637387 WNT10BO00744 389 aa17.93■□□□□ 0.46
CTSD-211ENST00000637387 ENTPD3O75355 529 aa17.93■□□□□ 0.46
CTSD-211ENST00000637387 RXRAP19793 462 aa17.93■□□□□ 0.46
CTSD-211ENST00000637387 SART3Q15020 963 aaKnown RBP17.93■□□□□ 0.46
CTSD-211ENST00000637387 TRPM4Q8TD43 1214 aa17.93■□□□□ 0.46
CTSD-211ENST00000637387 ZC3H15Q8WU90 426 aaKnown RBP17.93■□□□□ 0.46
CTSD-211ENST00000637387 MYL10Q9BUA6 226 aa17.93■□□□□ 0.46
CTSD-211ENST00000637387 MYOZ2Q9NPC6 264 aa17.93■□□□□ 0.46
CTSD-211ENST00000637387 FAM217BQ9NTX9 383 aaPredicted RBP17.93■□□□□ 0.46
CTSD-211ENST00000637387 RASSF10A6NK89 507 aa17.92■□□□□ 0.46
CTSD-211ENST00000637387 TSPY2A6NKD2 308 aa17.92■□□□□ 0.46
CTSD-211ENST00000637387 SHMT1P34896 483 aa17.92■□□□□ 0.46
CTSD-211ENST00000637387 TFAP4Q01664 338 aa17.92■□□□□ 0.46
CTSD-211ENST00000637387 IQCA1Q86XH1 822 aa17.92■□□□□ 0.46
CTSD-211ENST00000637387 MICALL2Q8IY33 904 aa17.92■□□□□ 0.46
CTSD-211ENST00000637387 LLPHQ9BRT6 129 aaKnown RBP17.92■□□□□ 0.46
CTSD-211ENST00000637387 SERPINB13Q9UIV8 391 aa17.92■□□□□ 0.46
CTSD-211ENST00000637387 NAP1L2Q9ULW6 460 aaPredicted RBP17.92■□□□□ 0.46
CTSD-211ENST00000637387 H7C1D1 291 aa17.91■□□□□ 0.46
CTSD-211ENST00000637387 BRD1O95696 1058 aa17.91■□□□□ 0.46
CTSD-211ENST00000637387 CDC27P30260 824 aa17.91■□□□□ 0.46
CTSD-211ENST00000637387 NBPF9Q3BBW0 867 aa17.91■□□□□ 0.46
CTSD-211ENST00000637387 MICU3Q86XE3 530 aa17.91■□□□□ 0.46
CTSD-211ENST00000637387 ZNF654Q8IZM8 581 aa17.91■□□□□ 0.46
CTSD-211ENST00000637387 DHX36Q9H2U1 1008 aaKnown RBP17.91■□□□□ 0.46
CTSD-211ENST00000637387 TCP11L1Q9NUJ3 509 aa17.91■□□□□ 0.46
CTSD-211ENST00000637387 TRPM7Q96QT4 1865 aa17.91■□□□□ 0.46
CTSD-211ENST00000637387 ERICH2A1L162 156 aa17.91■□□□□ 0.46
CTSD-211ENST00000637387 PTPDC1A2A3K4 754 aa17.91■□□□□ 0.46
CTSD-211ENST00000637387 CCDC69A6NI79 296 aa17.91■□□□□ 0.46
CTSD-211ENST00000637387 TRAF5O00463 557 aa17.91■□□□□ 0.46
CTSD-211ENST00000637387 ZBTB43O43298 467 aa17.91■□□□□ 0.46
CTSD-211ENST00000637387 HSPA1AP0DMV8 641 aaKnown RBP17.91■□□□□ 0.46
CTSD-211ENST00000637387 HSPA1BP0DMV9 641 aaKnown RBP17.91■□□□□ 0.46
CTSD-211ENST00000637387 VEGFBP49765 207 aa17.91■□□□□ 0.46
CTSD-211ENST00000637387 MMP14P50281 582 aa17.91■□□□□ 0.46
CTSD-211ENST00000637387 METAP2P50579 478 aaKnown RBP eCLIP17.91■□□□□ 0.46
CTSD-211ENST00000637387 RCAN1P53805 252 aa17.91■□□□□ 0.46
CTSD-211ENST00000637387 NUCB2P80303 420 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms