RNA–Protein interactions for RNA: ENST00000636271.1

CHRNA7-212, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,974 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-212ENST00000636271 FOSBP53539 338 aa18.24■□□□□ 0.51
CHRNA7-212ENST00000636271 CACNB3P54284 484 aa18.24■□□□□ 0.51
CHRNA7-212ENST00000636271 PPARAQ07869 468 aa18.24■□□□□ 0.51
CHRNA7-212ENST00000636271 STK11IPQ8N1F8 1099 aa18.24■□□□□ 0.51
CHRNA7-212ENST00000636271 DDX4Q9NQI0 724 aaKnown RBP18.24■□□□□ 0.51
CHRNA7-212ENST00000636271 FLT1P17948 1338 aa18.24■□□□□ 0.51
CHRNA7-212ENST00000636271 FDPSP14324 419 aaKnown RBP18.24■□□□□ 0.51
CHRNA7-212ENST00000636271 NFIAQ12857 509 aa18.24■□□□□ 0.51
CHRNA7-212ENST00000636271 C9orf131Q5VYM1 1079 aa18.24■□□□□ 0.51
CHRNA7-212ENST00000636271 ZSCAN30Q86W11 494 aa18.24■□□□□ 0.51
CHRNA7-212ENST00000636271 HPS5Q9UPZ3 1129 aa18.24■□□□□ 0.51
CHRNA7-212ENST00000636271 SBF1O95248 1867 aa18.23■□□□□ 0.51
CHRNA7-212ENST00000636271 PICALMQ13492 652 aa18.23■□□□□ 0.51
CHRNA7-212ENST00000636271 NUP62CLQ9H1M0 184 aa18.23■□□□□ 0.51
CHRNA7-212ENST00000636271 TDRD3Q9H7E2 651 aaKnown RBP18.23■□□□□ 0.51
CHRNA7-212ENST00000636271 SAP30BPQ9UHR5 308 aaKnown RBP18.23■□□□□ 0.51
CHRNA7-212ENST00000636271 HDAC9Q9UKV0 1011 aa18.23■□□□□ 0.51
CHRNA7-212ENST00000636271 SPDYE2BA6NHP3 402 aa18.22■□□□□ 0.51
CHRNA7-212ENST00000636271 EGFRP00533 1210 aa18.22■□□□□ 0.51
CHRNA7-212ENST00000636271 SPDYE6P0CI01 402 aa18.22■□□□□ 0.51
CHRNA7-212ENST00000636271 ADD1P35611 737 aaKnown RBP18.22■□□□□ 0.51
CHRNA7-212ENST00000636271 PGBD1Q96JS3 809 aa18.22■□□□□ 0.51
CHRNA7-212ENST00000636271 ANGEL1Q9UNK9 670 aaKnown RBP18.22■□□□□ 0.51
CHRNA7-212ENST00000636271 NEDD4P46934 1319 aa18.22■□□□□ 0.51
CHRNA7-212ENST00000636271 BAZ2AQ9UIF9 1905 aaKnown RBP18.22■□□□□ 0.51
CHRNA7-212ENST00000636271 PPFIA3O75145 1194 aa18.22■□□□□ 0.51
CHRNA7-212ENST00000636271 RPS12P25398 132 aaKnown RBP18.22■□□□□ 0.51
CHRNA7-212ENST00000636271 ATL3Q6DD88 541 aa18.22■□□□□ 0.51
CHRNA7-212ENST00000636271 DDX19AQ9NUU7 478 aaKnown RBP18.22■□□□□ 0.51
CHRNA7-212ENST00000636271 ANAPC4Q9UJX5 808 aa18.22■□□□□ 0.51
CHRNA7-212ENST00000636271 CCDC192P0DO97 292 aa18.21■□□□□ 0.51
CHRNA7-212ENST00000636271 PLCD1P51178 756 aa18.21■□□□□ 0.51
CHRNA7-212ENST00000636271 DLGAP5Q15398 846 aa18.21■□□□□ 0.51
CHRNA7-212ENST00000636271 MAP3K11Q16584 847 aa18.21■□□□□ 0.51
CHRNA7-212ENST00000636271 SBK1Q52WX2 424 aa18.21■□□□□ 0.51
CHRNA7-212ENST00000636271 CYB5R4Q7L1T6 521 aa18.21■□□□□ 0.51
CHRNA7-212ENST00000636271 ZFPM1Q8IX07 1006 aa18.21■□□□□ 0.51
CHRNA7-212ENST00000636271 DACT1Q9NYF0 836 aa18.21■□□□□ 0.51
CHRNA7-212ENST00000636271 ARPP21Q9UBL0 812 aaPredicted RBP18.21■□□□□ 0.51
CHRNA7-212ENST00000636271 CPLX1O14810 134 aa18.21■□□□□ 0.5
CHRNA7-212ENST00000636271 ZNF280AP59817 542 aaPredicted RBP18.21■□□□□ 0.5
CHRNA7-212ENST00000636271 AKNAD1Q5T1N1 836 aa18.21■□□□□ 0.5
CHRNA7-212ENST00000636271 C12orf60Q5U649 245 aa18.21■□□□□ 0.5
CHRNA7-212ENST00000636271 MICALL2Q8IY33 904 aa18.21■□□□□ 0.5
CHRNA7-212ENST00000636271 BICD2Q8TD16 824 aa18.21■□□□□ 0.5
CHRNA7-212ENST00000636271 DPF2Q92785 391 aa18.21■□□□□ 0.5
CHRNA7-212ENST00000636271 ZBED3Q96IU2 234 aaPredicted RBP18.21■□□□□ 0.5
CHRNA7-212ENST00000636271 ZNF396Q96N95 335 aaPredicted RBP18.21■□□□□ 0.5
CHRNA7-212ENST00000636271 MYOZ2Q9NPC6 264 aa18.21■□□□□ 0.5
CHRNA7-212ENST00000636271 TIAM2Q8IVF5 1701 aa18.2■□□□□ 0.5
CHRNA7-212ENST00000636271 B4E1Z4 1266 aa18.2■□□□□ 0.5
CHRNA7-212ENST00000636271 SH2B2O14492 632 aaPredicted RBP18.2■□□□□ 0.5
CHRNA7-212ENST00000636271 GUCY1B3Q02153 619 aa18.2■□□□□ 0.5
CHRNA7-212ENST00000636271 GPC2Q8N158 579 aa18.2■□□□□ 0.5
CHRNA7-212ENST00000636271 STAG1Q8WVM7 1258 aa18.2■□□□□ 0.5
CHRNA7-212ENST00000636271 TMEM87BQ96K49 555 aa18.2■□□□□ 0.5
CHRNA7-212ENST00000636271 FAM198AQ9UFP1 575 aa18.2■□□□□ 0.5
CHRNA7-212ENST00000636271 CNOT7Q9UIV1 285 aaKnown RBP18.2■□□□□ 0.5
CHRNA7-212ENST00000636271 RCOR1Q9UKL0 485 aa18.2■□□□□ 0.5
CHRNA7-212ENST00000636271 CLRN2A0PK11 232 aa18.19■□□□□ 0.5
CHRNA7-212ENST00000636271 WNT10BO00744 389 aa18.19■□□□□ 0.5
CHRNA7-212ENST00000636271 GRIN3BO60391 1043 aa18.19■□□□□ 0.5
CHRNA7-212ENST00000636271 DDNO94850 711 aaPredicted RBP18.19■□□□□ 0.5
CHRNA7-212ENST00000636271 CEBPZQ03701 1054 aaKnown RBP18.19■□□□□ 0.5
CHRNA7-212ENST00000636271 NBPF9Q3BBW0 867 aa18.19■□□□□ 0.5
CHRNA7-212ENST00000636271 RBM26Q5T8P6 1007 aaKnown RBP18.19■□□□□ 0.5
CHRNA7-212ENST00000636271 SAMD7Q7Z3H4 446 aa18.19■□□□□ 0.5
CHRNA7-212ENST00000636271 MTMR14Q8NCE2 650 aa18.19■□□□□ 0.5
CHRNA7-212ENST00000636271 TNMDQ9H2S6 317 aa18.19■□□□□ 0.5
CHRNA7-212ENST00000636271 ORC3Q9UBD5 711 aaPredicted RBP18.19■□□□□ 0.5
CHRNA7-212ENST00000636271 DICER1Q9UPY3 1922 aaKnown RBP18.19■□□□□ 0.5
CHRNA7-212ENST00000636271 CDK5RAP2Q96SN8 1893 aa18.19■□□□□ 0.5
CHRNA7-212ENST00000636271 MSNP26038 577 aaKnown RBP18.19■□□□□ 0.5
CHRNA7-212ENST00000636271 TCP10Q12799 353 aa18.19■□□□□ 0.5
CHRNA7-212ENST00000636271 CAMK4Q16566 473 aa18.19■□□□□ 0.5
CHRNA7-212ENST00000636271 MFSD6Q6ZSS7 791 aa18.19■□□□□ 0.5
CHRNA7-212ENST00000636271 RAB11FIP4Q86YS3 637 aa18.19■□□□□ 0.5
CHRNA7-212ENST00000636271 DYNLL2Q96FJ2 89 aa18.19■□□□□ 0.5
CHRNA7-212ENST00000636271 C8orf76Q96K31 380 aa18.19■□□□□ 0.5
CHRNA7-212ENST00000636271 IDI2Q9BXS1 227 aa18.19■□□□□ 0.5
CHRNA7-212ENST00000636271 NR1I2O75469 434 aa18.18■□□□□ 0.5
CHRNA7-212ENST00000636271 PRDM1O75626 825 aa18.18■□□□□ 0.5
CHRNA7-212ENST00000636271 POLR3DP05423 398 aaPredicted RBP18.18■□□□□ 0.5
CHRNA7-212ENST00000636271 USP28Q96RU2 1077 aa18.18■□□□□ 0.5
CHRNA7-212ENST00000636271 OSBPL5Q9H0X9 879 aaPredicted RBP18.18■□□□□ 0.5
CHRNA7-212ENST00000636271 CLSTN2Q9H4D0 955 aa18.18■□□□□ 0.5
CHRNA7-212ENST00000636271 CCDC39Q9UFE4 941 aa18.18■□□□□ 0.5
CHRNA7-212ENST00000636271 NOL7Q9UMY1 257 aaKnown RBP18.18■□□□□ 0.5
CHRNA7-212ENST00000636271 FGRP09769 529 aa18.17■□□□□ 0.5
CHRNA7-212ENST00000636271 RBM43Q6ZSC3 357 aaKnown RBP18.17■□□□□ 0.5
CHRNA7-212ENST00000636271 FBXO18Q8NFZ0 1043 aa18.17■□□□□ 0.5
CHRNA7-212ENST00000636271 FTOQ9C0B1 505 aaKnown RBP eCLIP18.17■□□□□ 0.5
CHRNA7-212ENST00000636271 CNNM2Q9H8M5 875 aa18.17■□□□□ 0.5
CHRNA7-212ENST00000636271 ZNF70Q9UC06 446 aaPredicted RBP18.17■□□□□ 0.5
CHRNA7-212ENST00000636271 USP25Q9UHP3 1055 aa18.17■□□□□ 0.5
CHRNA7-212ENST00000636271 METAP2P50579 478 aaKnown RBP eCLIP18.17■□□□□ 0.5
CHRNA7-212ENST00000636271 SPDYE2Q495Y8 402 aa18.17■□□□□ 0.5
CHRNA7-212ENST00000636271 TBC1D10BQ4KMP7 808 aaPredicted RBP18.17■□□□□ 0.5
CHRNA7-212ENST00000636271 RRP12Q5JTH9 1297 aaKnown RBP18.17■□□□□ 0.5
CHRNA7-212ENST00000636271 APOA5Q6Q788 366 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms