RNA–Protein interactions for RNA: ENST00000636114.1

CD46-219, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 2,098 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-219ENST00000636114 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.55□□□□□ -1.84
CD46-219ENST00000636114 PF4P02776 101 aa3.55□□□□□ -1.84
CD46-219ENST00000636114 BMP3P12645 472 aa3.55□□□□□ -1.84
CD46-219ENST00000636114 TCF3P15923 654 aa3.55□□□□□ -1.84
CD46-219ENST00000636114 ERVK-24P63145 666 aa3.55□□□□□ -1.84
CD46-219ENST00000636114 HDLBPQ00341 1268 aaKnown RBP3.55□□□□□ -1.84
CD46-219ENST00000636114 PTPN11Q06124 597 aaPredicted RBP3.55□□□□□ -1.84
CD46-219ENST00000636114 USP48Q86UV5 1035 aa3.55□□□□□ -1.84
CD46-219ENST00000636114 METTL16Q86W50 562 aaKnown RBP3.55□□□□□ -1.84
CD46-219ENST00000636114 FAM20CQ8IXL6 584 aa3.55□□□□□ -1.84
CD46-219ENST00000636114 FANCD2OSQ96PS1 177 aa3.55□□□□□ -1.84
CD46-219ENST00000636114 GSX1Q9H4S2 264 aaPredicted RBP3.55□□□□□ -1.84
CD46-219ENST00000636114 SHROOM2Q13796 1616 aa3.55□□□□□ -1.84
CD46-219ENST00000636114 ABCC10Q5T3U5 1492 aa3.55□□□□□ -1.84
CD46-219ENST00000636114 RPRD2Q5VT52 1461 aaKnown RBP3.55□□□□□ -1.84
CD46-219ENST00000636114 ANKRD50Q9ULJ7 1429 aa3.55□□□□□ -1.84
CD46-219ENST00000636114 KIAA1107Q9UPP5 1409 aa3.55□□□□□ -1.84
CD46-219ENST00000636114 MINDY4BA8MYZ0 360 aa3.55□□□□□ -1.84
CD46-219ENST00000636114 H2AFB1P0C5Y9 115 aa3.55□□□□□ -1.84
CD46-219ENST00000636114 H2AFB2P0C5Z0 115 aa3.55□□□□□ -1.84
CD46-219ENST00000636114 EIF4A3P38919 411 aaKnown RBP3.55□□□□□ -1.84
CD46-219ENST00000636114 ASPAP45381 313 aa3.55□□□□□ -1.84
CD46-219ENST00000636114 WIPI1Q5MNZ9 446 aaPredicted RBP3.55□□□□□ -1.84
CD46-219ENST00000636114 SNAP47Q5SQN1 464 aa3.55□□□□□ -1.84
CD46-219ENST00000636114 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.55□□□□□ -1.84
CD46-219ENST00000636114 PRR23CQ6ZRP0 262 aa3.55□□□□□ -1.84
CD46-219ENST00000636114 HDXQ7Z353 690 aa3.55□□□□□ -1.84
CD46-219ENST00000636114 GATAD2BQ8WXI9 593 aa3.55□□□□□ -1.84
CD46-219ENST00000636114 ELMO3Q96BJ8 720 aa3.55□□□□□ -1.84
CD46-219ENST00000636114 PIDD1Q9HB75 910 aa3.55□□□□□ -1.84
CD46-219ENST00000636114 KCNQ5Q9NR82 932 aa3.55□□□□□ -1.84
CD46-219ENST00000636114 DISC1Q9NRI5 854 aa3.55□□□□□ -1.84
CD46-219ENST00000636114 FAM105AQ9NUU6 356 aa3.55□□□□□ -1.84
CD46-219ENST00000636114 SUPT16HQ9Y5B9 1047 aaKnown RBP3.55□□□□□ -1.84
CD46-219ENST00000636114 ANKRD30BQ9BXX2 1392 aa3.54□□□□□ -1.84
CD46-219ENST00000636114 UHRF1BP1LA0JNW5 1464 aa3.54□□□□□ -1.84
CD46-219ENST00000636114 ARID4BQ4LE39 1312 aaPredicted RBP3.54□□□□□ -1.84
CD46-219ENST00000636114 ARHGEF5Q12774 1597 aa3.54□□□□□ -1.84
CD46-219ENST00000636114 ADGBQ8N7X0 1667 aa3.54□□□□□ -1.84
CD46-219ENST00000636114 DCDC2CA8MYV0 355 aa3.54□□□□□ -1.84
CD46-219ENST00000636114 CILPO75339 1184 aa3.54□□□□□ -1.84
CD46-219ENST00000636114 BPNT1O95861 308 aa3.54□□□□□ -1.84
CD46-219ENST00000636114 RAB6AP20340 208 aa3.54□□□□□ -1.84
CD46-219ENST00000636114 MAP4P27816 1152 aaKnown RBP3.54□□□□□ -1.84
CD46-219ENST00000636114 RXRBP28702 533 aa3.54□□□□□ -1.84
CD46-219ENST00000636114 RPL6Q02878 288 aaKnown RBP3.54□□□□□ -1.84
CD46-219ENST00000636114 FAM160A1Q05DH4 1040 aa3.54□□□□□ -1.84
CD46-219ENST00000636114 ZNF394Q53GI3 561 aa3.54□□□□□ -1.84
CD46-219ENST00000636114 SGO2Q562F6 1265 aa3.54□□□□□ -1.84
CD46-219ENST00000636114 NKAPLQ5M9Q1 402 aa3.54□□□□□ -1.84
CD46-219ENST00000636114 LRFN4Q6PJG9 635 aa3.54□□□□□ -1.84
CD46-219ENST00000636114 BNC2Q6ZN30 1099 aaPredicted RBP3.54□□□□□ -1.84
CD46-219ENST00000636114 BEND4Q6ZU67 534 aa3.54□□□□□ -1.84
CD46-219ENST00000636114 NT5DC4Q86YG4 428 aa3.54□□□□□ -1.84
CD46-219ENST00000636114 GOLM1Q8NBJ4 401 aa3.54□□□□□ -1.84
CD46-219ENST00000636114 RNF214Q8ND24 703 aa3.54□□□□□ -1.84
CD46-219ENST00000636114 JARID2Q92833 1246 aaPredicted RBP3.54□□□□□ -1.84
CD46-219ENST00000636114 PLPPR2Q96GM1 343 aa3.54□□□□□ -1.84
CD46-219ENST00000636114 KCNF1Q9H3M0 494 aa3.54□□□□□ -1.84
CD46-219ENST00000636114 PICK1Q9NRD5 415 aa3.54□□□□□ -1.84
CD46-219ENST00000636114 DDX41Q9UJV9 622 aaKnown RBP3.54□□□□□ -1.84
CD46-219ENST00000636114 RAXQ9Y2V3 346 aa3.54□□□□□ -1.84
CD46-219ENST00000636114 PCDHGB7Q9Y5F8 929 aa3.54□□□□□ -1.84
CD46-219ENST00000636114 SNCAIPQ9Y6H5 919 aa3.54□□□□□ -1.84
CD46-219ENST00000636114 ABCC2Q92887 1545 aa3.53□□□□□ -1.84
CD46-219ENST00000636114 FAM221AA4D161 298 aa3.53□□□□□ -1.84
CD46-219ENST00000636114 FANCGO15287 622 aa3.53□□□□□ -1.84
CD46-219ENST00000636114 F13A1P00488 732 aa3.53□□□□□ -1.84
CD46-219ENST00000636114 HCLS1P14317 486 aaPredicted RBP3.53□□□□□ -1.84
CD46-219ENST00000636114 GARTP22102 1010 aa3.53□□□□□ -1.84
CD46-219ENST00000636114 RING1Q06587 406 aa3.53□□□□□ -1.84
CD46-219ENST00000636114 MAP7Q14244 749 aa3.53□□□□□ -1.84
CD46-219ENST00000636114 INPP5AQ14642 412 aa3.53□□□□□ -1.84
CD46-219ENST00000636114 TTLL4Q14679 1199 aa3.53□□□□□ -1.84
CD46-219ENST00000636114 RSPO4Q2I0M5 234 aaPredicted RBP3.53□□□□□ -1.84
CD46-219ENST00000636114 PPM1JQ5JR12 505 aa3.53□□□□□ -1.84
CD46-219ENST00000636114 CDPF1Q6NVV7 123 aa3.53□□□□□ -1.84
CD46-219ENST00000636114 FBXL19Q6PCT2 694 aa3.53□□□□□ -1.84
CD46-219ENST00000636114 FAM196AQ6ZSG2 479 aa3.53□□□□□ -1.84
CD46-219ENST00000636114 CYFIP1Q7L576 1253 aa3.53□□□□□ -1.84
CD46-219ENST00000636114 C12orf40Q86WS4 652 aa3.53□□□□□ -1.84
CD46-219ENST00000636114 CLEC10AQ8IUN9 316 aa3.53□□□□□ -1.84
CD46-219ENST00000636114 FBLIM1Q8WUP2 373 aa3.53□□□□□ -1.84
CD46-219ENST00000636114 EZH1Q92800 747 aaPredicted RBP3.53□□□□□ -1.84
CD46-219ENST00000636114 ACSS3Q9H6R3 686 aa3.53□□□□□ -1.84
CD46-219ENST00000636114 ADAMTS1Q9UHI8 967 aa3.53□□□□□ -1.84
CD46-219ENST00000636114 ROBO2Q9HCK4 1378 aa3.53□□□□□ -1.84
CD46-219ENST00000636114 CCDC141Q6ZP82 1450 aa3.53□□□□□ -1.84
CD46-219ENST00000636114 ZNF644Q9H582 1327 aaPredicted RBP3.53□□□□□ -1.84
CD46-219ENST00000636114 C9orf84Q5VXU9 1444 aa3.53□□□□□ -1.84
CD46-219ENST00000636114 FAM95CA0A1B0GW59 222 aa3.53□□□□□ -1.84
CD46-219ENST00000636114 PRAMEF27A3QJZ7 478 aa3.53□□□□□ -1.84
CD46-219ENST00000636114 DYRK3O43781 588 aa3.53□□□□□ -1.84
CD46-219ENST00000636114 GREM1O60565 184 aa3.53□□□□□ -1.84
CD46-219ENST00000636114 DDX10Q13206 875 aaKnown RBP3.53□□□□□ -1.84
CD46-219ENST00000636114 MPP2Q14168 576 aa3.53□□□□□ -1.84
CD46-219ENST00000636114 ZBTB37Q5TC79 503 aa3.53□□□□□ -1.84
CD46-219ENST00000636114 EFCAB2Q5VUJ9 269 aa3.53□□□□□ -1.84
CD46-219ENST00000636114 C9orf131Q5VYM1 1079 aa3.53□□□□□ -1.84
CD46-219ENST00000636114 PAOXQ6QHF9 649 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms