RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 CFAP100Q494V2 611 aa11.68□□□□□ -0.54
CACNA1A-216ENST00000635742 IFIT1BQ5T764 474 aaKnown RBP11.68□□□□□ -0.54
CACNA1A-216ENST00000635742 FERMT3Q86UX7 667 aa11.68□□□□□ -0.54
CACNA1A-216ENST00000635742 GMLQ99445 158 aa11.68□□□□□ -0.54
CACNA1A-216ENST00000635742 ZNRF3Q9ULT6 936 aa11.68□□□□□ -0.54
CACNA1A-216ENST00000635742 MYO3BQ8WXR4 1341 aa11.68□□□□□ -0.54
CACNA1A-216ENST00000635742 GOLGA6L22H0YM25 854 aa11.67□□□□□ -0.54
CACNA1A-216ENST00000635742 CDK8P49336 464 aa11.67□□□□□ -0.54
CACNA1A-216ENST00000635742 TFAP4Q01664 338 aa11.67□□□□□ -0.54
CACNA1A-216ENST00000635742 RASSF7Q02833 373 aa11.67□□□□□ -0.54
CACNA1A-216ENST00000635742 RTN1Q16799 776 aa11.67□□□□□ -0.54
CACNA1A-216ENST00000635742 RCSD1Q6JBY9 416 aa11.67□□□□□ -0.54
CACNA1A-216ENST00000635742 SYNE3Q6ZMZ3 975 aa11.67□□□□□ -0.54
CACNA1A-216ENST00000635742 ZFPM1Q8IX07 1006 aa11.67□□□□□ -0.54
CACNA1A-216ENST00000635742 TMTC2Q8N394 836 aa11.67□□□□□ -0.54
CACNA1A-216ENST00000635742 NUP133Q8WUM0 1156 aa11.67□□□□□ -0.54
CACNA1A-216ENST00000635742 MKNK2Q9HBH9 465 aa11.67□□□□□ -0.54
CACNA1A-216ENST00000635742 ORC3Q9UBD5 711 aaPredicted RBP11.67□□□□□ -0.54
CACNA1A-216ENST00000635742 ZBTB12Q9Y330 459 aaPredicted RBP11.67□□□□□ -0.54
CACNA1A-216ENST00000635742 PRELPP51888 382 aa11.66□□□□□ -0.54
CACNA1A-216ENST00000635742 RCAN1P53805 252 aa11.66□□□□□ -0.54
CACNA1A-216ENST00000635742 GABPAQ06546 454 aa11.66□□□□□ -0.54
CACNA1A-216ENST00000635742 PHKBQ93100 1093 aa11.66□□□□□ -0.54
CACNA1A-216ENST00000635742 IL17RBQ9NRM6 502 aa11.66□□□□□ -0.54
CACNA1A-216ENST00000635742 LMBRD1Q9NUN5 540 aa11.66□□□□□ -0.54
CACNA1A-216ENST00000635742 FAM198AQ9UFP1 575 aa11.66□□□□□ -0.54
CACNA1A-216ENST00000635742 H3BQV1 296 aa11.66□□□□□ -0.54
CACNA1A-216ENST00000635742 TRAK2O60296 914 aa11.66□□□□□ -0.54
CACNA1A-216ENST00000635742 CXCL9Q07325 125 aa11.66□□□□□ -0.54
CACNA1A-216ENST00000635742 RESTQ13127 1097 aa11.66□□□□□ -0.54
CACNA1A-216ENST00000635742 IFFO2Q5TF58 517 aa11.66□□□□□ -0.54
CACNA1A-216ENST00000635742 PRMT6Q96LA8 375 aaPredicted RBP11.66□□□□□ -0.54
CACNA1A-216ENST00000635742 TDRD3Q9H7E2 651 aaKnown RBP11.66□□□□□ -0.54
CACNA1A-216ENST00000635742 GDPD2Q9HCC8 539 aa11.66□□□□□ -0.54
CACNA1A-216ENST00000635742 CNPY2Q9Y2B0 182 aa11.66□□□□□ -0.54
CACNA1A-216ENST00000635742 KIF3AQ9Y496 699 aa11.66□□□□□ -0.54
CACNA1A-216ENST00000635742 MYH6P13533 1939 aa11.65□□□□□ -0.54
CACNA1A-216ENST00000635742 GREB1LQ9C091 1923 aaPredicted RBP11.65□□□□□ -0.54
CACNA1A-216ENST00000635742 STK36Q9NRP7 1315 aa11.65□□□□□ -0.54
CACNA1A-216ENST00000635742 LTBP3Q9NS15 1303 aa11.65□□□□□ -0.54
CACNA1A-216ENST00000635742 UBE2Q2LH0YL09 131 aa11.65□□□□□ -0.54
CACNA1A-216ENST00000635742 CDKL5O76039 1030 aa11.65□□□□□ -0.54
CACNA1A-216ENST00000635742 TSPY3P0CV98 308 aa11.65□□□□□ -0.54
CACNA1A-216ENST00000635742 TSPY8P0CW00 308 aa11.65□□□□□ -0.54
CACNA1A-216ENST00000635742 SLURP2P0DP57 97 aa11.65□□□□□ -0.54
CACNA1A-216ENST00000635742 NT5C2P49902 561 aa11.65□□□□□ -0.54
CACNA1A-216ENST00000635742 GUCY1B3Q02153 619 aa11.65□□□□□ -0.54
CACNA1A-216ENST00000635742 TROAPQ12815 778 aa11.65□□□□□ -0.54
CACNA1A-216ENST00000635742 OTUD7BQ6GQQ9 843 aa11.65□□□□□ -0.54
CACNA1A-216ENST00000635742 FAM173BQ6P4H8 233 aa11.65□□□□□ -0.54
CACNA1A-216ENST00000635742 CATIPQ7Z7H3 387 aa11.65□□□□□ -0.54
CACNA1A-216ENST00000635742 TTC6Q86TZ1 520 aa11.65□□□□□ -0.54
CACNA1A-216ENST00000635742 FANCBQ8NB91 859 aa11.65□□□□□ -0.54
CACNA1A-216ENST00000635742 AIFM3Q96NN9 605 aa11.65□□□□□ -0.54
CACNA1A-216ENST00000635742 IDI2Q9BXS1 227 aa11.65□□□□□ -0.54
CACNA1A-216ENST00000635742 SPON1Q9HCB6 807 aa11.65□□□□□ -0.54
CACNA1A-216ENST00000635742 GJB4Q9NTQ9 266 aa11.65□□□□□ -0.54
CACNA1A-216ENST00000635742 PLIN4Q96Q06 1357 aa11.64□□□□□ -0.55
CACNA1A-216ENST00000635742 PRPF40AO75400 957 aaKnown RBP11.64□□□□□ -0.55
CACNA1A-216ENST00000635742 DDAH1O94760 285 aa11.64□□□□□ -0.55
CACNA1A-216ENST00000635742 IFNAR1P17181 557 aa11.64□□□□□ -0.55
CACNA1A-216ENST00000635742 DNM1Q05193 864 aaKnown RBP11.64□□□□□ -0.55
CACNA1A-216ENST00000635742 TCP10Q12799 353 aa11.64□□□□□ -0.55
CACNA1A-216ENST00000635742 CPLX2Q6PUV4 134 aaKnown RBP11.64□□□□□ -0.55
CACNA1A-216ENST00000635742 SH3BP5LQ7L8J4 393 aa11.64□□□□□ -0.55
CACNA1A-216ENST00000635742 ZNF444Q8N0Y2 327 aaPredicted RBP11.64□□□□□ -0.55
CACNA1A-216ENST00000635742 CMTR1Q8N1G2 835 aaKnown RBP11.64□□□□□ -0.55
CACNA1A-216ENST00000635742 ZNF287Q9HBT7 754 aa11.64□□□□□ -0.55
CACNA1A-216ENST00000635742 SPDYE2BA6NHP3 402 aa11.64□□□□□ -0.55
CACNA1A-216ENST00000635742 SPDYE6P0CI01 402 aa11.64□□□□□ -0.55
CACNA1A-216ENST00000635742 PTMSP20962 102 aa11.64□□□□□ -0.55
CACNA1A-216ENST00000635742 CIAPIN1Q6FI81 312 aa11.64□□□□□ -0.55
CACNA1A-216ENST00000635742 NBPF11Q86T75 865 aa11.64□□□□□ -0.55
CACNA1A-216ENST00000635742 JDP2Q8WYK2 163 aa11.64□□□□□ -0.55
CACNA1A-216ENST00000635742 SLC26A6Q9BXS9 759 aa11.64□□□□□ -0.55
CACNA1A-216ENST00000635742 TCP11L1Q9NUJ3 509 aa11.64□□□□□ -0.55
CACNA1A-216ENST00000635742 ATP6V1DQ9Y5K8 247 aa11.64□□□□□ -0.55
CACNA1A-216ENST00000635742 DDTLA6NHG4 134 aaPredicted RBP11.63□□□□□ -0.55
CACNA1A-216ENST00000635742 PLEKHA8P1O95397 391 aa11.63□□□□□ -0.55
CACNA1A-216ENST00000635742 FMNL1O95466 1100 aaPredicted RBP11.63□□□□□ -0.55
CACNA1A-216ENST00000635742 HLA-DOAP06340 250 aa11.63□□□□□ -0.55
CACNA1A-216ENST00000635742 SHMT1P34896 483 aa11.63□□□□□ -0.55
CACNA1A-216ENST00000635742 DGKHQ86XP1 1220 aa11.63□□□□□ -0.55
CACNA1A-216ENST00000635742 AGBL3Q8NEM8 1001 aa11.63□□□□□ -0.55
CACNA1A-216ENST00000635742 NEDD1Q8NHV4 660 aa11.63□□□□□ -0.55
CACNA1A-216ENST00000635742 ANKS1AQ92625 1134 aa11.63□□□□□ -0.55
CACNA1A-216ENST00000635742 C8orf76Q96K31 380 aa11.63□□□□□ -0.55
CACNA1A-216ENST00000635742 PKNOX2Q96KN3 472 aa11.63□□□□□ -0.55
CACNA1A-216ENST00000635742 ALG1Q9BT22 464 aa11.63□□□□□ -0.55
CACNA1A-216ENST00000635742 DNAJC18Q9H819 358 aa11.63□□□□□ -0.55
CACNA1A-216ENST00000635742 SERPINB13Q9UIV8 391 aa11.63□□□□□ -0.55
CACNA1A-216ENST00000635742 HDAC9Q9UKV0 1011 aa11.63□□□□□ -0.55
CACNA1A-216ENST00000635742 GOLGB1Q14789 3259 aaKnown RBP11.62□□□□□ -0.55
CACNA1A-216ENST00000635742 CCDC196A0A1B0GTZ2 297 aa11.62□□□□□ -0.55
CACNA1A-216ENST00000635742 SHTN1A0MZ66 631 aa11.62□□□□□ -0.55
CACNA1A-216ENST00000635742 CLRN2A0PK11 232 aa11.62□□□□□ -0.55
CACNA1A-216ENST00000635742 FAM196BA6NMK8 535 aa11.62□□□□□ -0.55
CACNA1A-216ENST00000635742 FIBPO43427 364 aa11.62□□□□□ -0.55
CACNA1A-216ENST00000635742 NPM3O75607 178 aaKnown RBP11.62□□□□□ -0.55
CACNA1A-216ENST00000635742 CALM1P0DP23 149 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms