RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 LRRN4CLQ8ND94 238 aa12.25□□□□□ -0.45
PSPC1-207ENST00000635251 BAG1Q99933 345 aaPredicted RBP12.25□□□□□ -0.45
PSPC1-207ENST00000635251 MTA3Q9BTC8 594 aa12.25□□□□□ -0.45
PSPC1-207ENST00000635251 ABCF2Q9UG63 623 aa12.25□□□□□ -0.45
PSPC1-207ENST00000635251 SRPRBQ9Y5M8 271 aaKnown RBP12.25□□□□□ -0.45
PSPC1-207ENST00000635251 ARAP2Q8WZ64 1704 aa12.24□□□□□ -0.45
PSPC1-207ENST00000635251 GABPB1Q06547 395 aaPredicted RBP12.24□□□□□ -0.45
PSPC1-207ENST00000635251 FMR1Q06787 632 aaKnown RBP eCLIP12.24□□□□□ -0.45
PSPC1-207ENST00000635251 REXO1L1PQ8IX06 675 aa12.24□□□□□ -0.45
PSPC1-207ENST00000635251 ZNF579Q8NAF0 562 aaKnown RBP12.24□□□□□ -0.45
PSPC1-207ENST00000635251 ENOX1Q8TC92 643 aaKnown RBP12.24□□□□□ -0.45
PSPC1-207ENST00000635251 SDR42E1Q8WUS8 393 aa12.24□□□□□ -0.45
PSPC1-207ENST00000635251 ESR2Q92731 530 aa12.24□□□□□ -0.45
PSPC1-207ENST00000635251 CCDC34Q96HJ3 373 aa12.24□□□□□ -0.45
PSPC1-207ENST00000635251 CSRNP2Q9H175 543 aa12.24□□□□□ -0.45
PSPC1-207ENST00000635251 INTS13Q9NVM9 706 aa12.24□□□□□ -0.45
PSPC1-207ENST00000635251 RAI14Q9P0K7 980 aa12.24□□□□□ -0.45
PSPC1-207ENST00000635251 PPP2R2CQ9Y2T4 447 aa12.24□□□□□ -0.45
PSPC1-207ENST00000635251 RTL9Q8NET4 1388 aa12.24□□□□□ -0.45
PSPC1-207ENST00000635251 TNKSO95271 1327 aa12.24□□□□□ -0.45
PSPC1-207ENST00000635251 CHD4Q14839 1912 aa12.23□□□□□ -0.45
PSPC1-207ENST00000635251 CHRNDQ07001 517 aa12.23□□□□□ -0.45
PSPC1-207ENST00000635251 MORC3Q14149 939 aa12.23□□□□□ -0.45
PSPC1-207ENST00000635251 ARHGAP29Q52LW3 1261 aa12.23□□□□□ -0.45
PSPC1-207ENST00000635251 SPECC1LQ69YQ0 1117 aa12.23□□□□□ -0.45
PSPC1-207ENST00000635251 TRIM65Q6PJ69 517 aa12.23□□□□□ -0.45
PSPC1-207ENST00000635251 TRIML1Q8N9V2 468 aa12.23□□□□□ -0.45
PSPC1-207ENST00000635251 UBXN4Q92575 508 aa12.23□□□□□ -0.45
PSPC1-207ENST00000635251 NOL10Q9BSC4 688 aaKnown RBP12.23□□□□□ -0.45
PSPC1-207ENST00000635251 MAGEB6P1A0A0J9YX57 407 aa12.23□□□□□ -0.45
PSPC1-207ENST00000635251 SARSP49591 514 aaKnown RBP12.23□□□□□ -0.45
PSPC1-207ENST00000635251 RCAN1P53805 252 aa12.23□□□□□ -0.45
PSPC1-207ENST00000635251 ADKP55263 362 aaKnown RBP12.23□□□□□ -0.45
PSPC1-207ENST00000635251 NT5DC1Q5TFE4 455 aa12.23□□□□□ -0.45
PSPC1-207ENST00000635251 NUTM2AQ8IVF1 878 aaPredicted RBP12.23□□□□□ -0.45
PSPC1-207ENST00000635251 DHX58Q96C10 678 aa12.23□□□□□ -0.45
PSPC1-207ENST00000635251 SRRTQ9BXP5 876 aaKnown RBP12.23□□□□□ -0.45
PSPC1-207ENST00000635251 CCDC87Q9NVE4 849 aa12.23□□□□□ -0.45
PSPC1-207ENST00000635251 DOCK2Q92608 1830 aa12.23□□□□□ -0.45
PSPC1-207ENST00000635251 ZNF335Q9H4Z2 1342 aaPredicted RBP12.23□□□□□ -0.45
PSPC1-207ENST00000635251 SLIT2O94813 1529 aa12.22□□□□□ -0.45
PSPC1-207ENST00000635251 TRIM75PA6NK02 468 aa12.22□□□□□ -0.45
PSPC1-207ENST00000635251 ACTN4O43707 911 aaKnown RBP12.22□□□□□ -0.45
PSPC1-207ENST00000635251 KIF20AO95235 890 aa12.22□□□□□ -0.45
PSPC1-207ENST00000635251 KRT2P35908 639 aa12.22□□□□□ -0.45
PSPC1-207ENST00000635251 EIF5P55010 431 aaKnown RBP12.22□□□□□ -0.45
PSPC1-207ENST00000635251 PARP10Q53GL7 1025 aa12.22□□□□□ -0.45
PSPC1-207ENST00000635251 TMEM139Q8IV31 216 aa12.22□□□□□ -0.45
PSPC1-207ENST00000635251 RNF26Q9BY78 433 aaPredicted RBP12.22□□□□□ -0.45
PSPC1-207ENST00000635251 ARGLU1Q9NWB6 273 aaPredicted RBP12.22□□□□□ -0.45
PSPC1-207ENST00000635251 VPS54Q9P1Q0 977 aa12.22□□□□□ -0.45
PSPC1-207ENST00000635251 KAT6BQ8WYB5 2073 aa12.22□□□□□ -0.45
PSPC1-207ENST00000635251 VWA3AA6NCI4 1184 aa12.22□□□□□ -0.45
PSPC1-207ENST00000635251 GOLGA6L9A6NEM1 432 aa12.22□□□□□ -0.45
PSPC1-207ENST00000635251 STX10O60499 249 aa12.22□□□□□ -0.45
PSPC1-207ENST00000635251 ZNF18P17022 549 aa12.22□□□□□ -0.45
PSPC1-207ENST00000635251 CASQ1P31415 396 aa12.22□□□□□ -0.45
PSPC1-207ENST00000635251 ATP6V1AP38606 617 aa12.22□□□□□ -0.45
PSPC1-207ENST00000635251 AFMP43652 599 aa12.22□□□□□ -0.45
PSPC1-207ENST00000635251 PLCD1P51178 756 aa12.22□□□□□ -0.45
PSPC1-207ENST00000635251 TBX2Q13207 712 aaPredicted RBP12.22□□□□□ -0.45
PSPC1-207ENST00000635251 BMS1Q14692 1282 aaKnown RBP12.22□□□□□ -0.45
PSPC1-207ENST00000635251 USP49Q70CQ1 688 aa12.22□□□□□ -0.45
PSPC1-207ENST00000635251 SAMSN1Q9NSI8 373 aaKnown RBP12.22□□□□□ -0.45
PSPC1-207ENST00000635251 NIP7Q9Y221 180 aaKnown RBP eCLIP12.22□□□□□ -0.45
PSPC1-207ENST00000635251 hCG_1642624A0A1W2PR95 340 aa12.21□□□□□ -0.45
PSPC1-207ENST00000635251 H2AFXP16104 143 aaPredicted RBP12.21□□□□□ -0.45
PSPC1-207ENST00000635251 CRKLP46109 303 aaKnown RBP12.21□□□□□ -0.45
PSPC1-207ENST00000635251 GNG11P61952 73 aa12.21□□□□□ -0.45
PSPC1-207ENST00000635251 PPP2R5BQ15173 497 aa12.21□□□□□ -0.45
PSPC1-207ENST00000635251 KLHL10Q6JEL2 608 aa12.21□□□□□ -0.45
PSPC1-207ENST00000635251 CATIPQ7Z7H3 387 aa12.21□□□□□ -0.45
PSPC1-207ENST00000635251 ADGRA1Q86SQ6 560 aa12.21□□□□□ -0.45
PSPC1-207ENST00000635251 TC2NQ8N9U0 490 aa12.21□□□□□ -0.45
PSPC1-207ENST00000635251 CARD6Q9BX69 1037 aa12.21□□□□□ -0.45
PSPC1-207ENST00000635251 BRMS1Q9HCU9 246 aa12.21□□□□□ -0.45
PSPC1-207ENST00000635251 GNL3LQ9NVN8 582 aaKnown RBP12.21□□□□□ -0.45
PSPC1-207ENST00000635251 DISP2A7MBM2 1401 aa12.21□□□□□ -0.45
PSPC1-207ENST00000635251 FAM205CA6NFA0 338 aa12.21□□□□□ -0.46
PSPC1-207ENST00000635251 PRDM1O75626 825 aa12.21□□□□□ -0.46
PSPC1-207ENST00000635251 ERCC5P28715 1186 aaPredicted RBP12.21□□□□□ -0.46
PSPC1-207ENST00000635251 CLCN6P51797 869 aa12.21□□□□□ -0.46
PSPC1-207ENST00000635251 SEC23AQ15436 765 aa12.21□□□□□ -0.46
PSPC1-207ENST00000635251 IFIT1BQ5T764 474 aaKnown RBP12.21□□□□□ -0.46
PSPC1-207ENST00000635251 ZSCAN10Q96SZ4 725 aaPredicted RBP12.21□□□□□ -0.46
PSPC1-207ENST00000635251 ZNF446Q9NWS9 450 aa12.21□□□□□ -0.46
PSPC1-207ENST00000635251 AATFQ9NY61 560 aaKnown RBP eCLIP12.21□□□□□ -0.46
PSPC1-207ENST00000635251 GYG1P46976 350 aa12.2□□□□□ -0.46
PSPC1-207ENST00000635251 INTS5Q6P9B9 1019 aaKnown RBP12.2□□□□□ -0.46
PSPC1-207ENST00000635251 TOGARAM2Q6ZUX3 1019 aa12.2□□□□□ -0.46
PSPC1-207ENST00000635251 EPSTI1Q96J88 318 aa12.2□□□□□ -0.46
PSPC1-207ENST00000635251 CDC5LQ99459 802 aaKnown RBP12.2□□□□□ -0.46
PSPC1-207ENST00000635251 PARP3Q9Y6F1 533 aa12.2□□□□□ -0.46
PSPC1-207ENST00000635251 V9GY48 417 aaPredicted RBP12.2□□□□□ -0.46
PSPC1-207ENST00000635251 SMIM22K7EJ46 135 aa12.2□□□□□ -0.46
PSPC1-207ENST00000635251 STX17P56962 302 aa12.2□□□□□ -0.46
PSPC1-207ENST00000635251 TMCO3Q6UWJ1 677 aa12.2□□□□□ -0.46
PSPC1-207ENST00000635251 IQCA1Q86XH1 822 aa12.2□□□□□ -0.46
PSPC1-207ENST00000635251 ENAHQ8N8S7 591 aaPredicted RBP12.2□□□□□ -0.46
PSPC1-207ENST00000635251 ACSBG1Q96GR2 724 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms