RNA–Protein interactions for RNA: ENST00000635058.2

RHOXF1P3-201, Transcript of Rhox homeobox family member 1 pseudogene 3, humanhuman

BASIC

Gene RHOXF1P3, Length 502 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1P3-201ENST00000635058 GDF11O95390 407 aa12.12□□□□□ -0.47
RHOXF1P3-201ENST00000635058 SGPL1O95470 568 aa12.12□□□□□ -0.47
RHOXF1P3-201ENST00000635058 IFIT2P09913 472 aaKnown RBP12.12□□□□□ -0.47
RHOXF1P3-201ENST00000635058 ELNP15502 786 aa12.12□□□□□ -0.47
RHOXF1P3-201ENST00000635058 HOXA7P31268 230 aaPredicted RBP12.12□□□□□ -0.47
RHOXF1P3-201ENST00000635058 RHPN1Q8TCX5 695 aa12.12□□□□□ -0.47
RHOXF1P3-201ENST00000635058 KIF1BPQ96EK5 621 aa12.12□□□□□ -0.47
RHOXF1P3-201ENST00000635058 BCL11AQ9H165 835 aa12.12□□□□□ -0.47
RHOXF1P3-201ENST00000635058 UNC93B1Q9H1C4 597 aa12.12□□□□□ -0.47
RHOXF1P3-201ENST00000635058 IL1RAPL2Q9NP60 686 aa12.12□□□□□ -0.47
RHOXF1P3-201ENST00000635058 CABP5Q9NP86 173 aa12.12□□□□□ -0.47
RHOXF1P3-201ENST00000635058 ZBTB21Q9ULJ3 1066 aa12.12□□□□□ -0.47
RHOXF1P3-201ENST00000635058 NR2E3Q9Y5X4 410 aa12.12□□□□□ -0.47
RHOXF1P3-201ENST00000635058 CENPFP49454 3210 aa12.11□□□□□ -0.47
RHOXF1P3-201ENST00000635058 APBB1O00213 710 aa12.11□□□□□ -0.47
RHOXF1P3-201ENST00000635058 RAB11FIP3O75154 756 aa12.11□□□□□ -0.47
RHOXF1P3-201ENST00000635058 INHAP05111 366 aa12.11□□□□□ -0.47
RHOXF1P3-201ENST00000635058 POLR3DP05423 398 aaPredicted RBP12.11□□□□□ -0.47
RHOXF1P3-201ENST00000635058 USP17L2Q6R6M4 530 aa12.11□□□□□ -0.47
RHOXF1P3-201ENST00000635058 GPRC5AQ8NFJ5 357 aa12.11□□□□□ -0.47
RHOXF1P3-201ENST00000635058 GTF3C2Q8WUA4 911 aaPredicted RBP12.11□□□□□ -0.47
RHOXF1P3-201ENST00000635058 P2RX7Q99572 595 aaKnown RBP12.11□□□□□ -0.47
RHOXF1P3-201ENST00000635058 CWC22Q9HCG8 908 aaKnown RBP12.11□□□□□ -0.47
RHOXF1P3-201ENST00000635058 SERPINB13Q9UIV8 391 aa12.11□□□□□ -0.47
RHOXF1P3-201ENST00000635058 MAGEB6P1A0A0J9YX57 407 aa12.1□□□□□ -0.47
RHOXF1P3-201ENST00000635058 H0YGN5 161 aa12.1□□□□□ -0.47
RHOXF1P3-201ENST00000635058 FARP2O94887 1054 aaPredicted RBP12.1□□□□□ -0.47
RHOXF1P3-201ENST00000635058 GH2P01242 217 aa12.1□□□□□ -0.47
RHOXF1P3-201ENST00000635058 USP14P54578 494 aa12.1□□□□□ -0.47
RHOXF1P3-201ENST00000635058 PDE3AQ14432 1141 aa12.1□□□□□ -0.47
RHOXF1P3-201ENST00000635058 CERKLQ49MI3 558 aaPredicted RBP12.1□□□□□ -0.47
RHOXF1P3-201ENST00000635058 SLC9C2Q5TAH2 1124 aa12.1□□□□□ -0.47
RHOXF1P3-201ENST00000635058 TATDN1Q6P1N9 297 aa12.1□□□□□ -0.47
RHOXF1P3-201ENST00000635058 SHISA4Q96DD7 197 aa12.1□□□□□ -0.47
RHOXF1P3-201ENST00000635058 DEFB118Q96PH6 123 aa12.1□□□□□ -0.47
RHOXF1P3-201ENST00000635058 FEZ1Q99689 392 aa12.1□□□□□ -0.47
RHOXF1P3-201ENST00000635058 CRNKL1Q9BZJ0 848 aaKnown RBP12.1□□□□□ -0.47
RHOXF1P3-201ENST00000635058 EHD4Q9H223 541 aa12.1□□□□□ -0.47
RHOXF1P3-201ENST00000635058 ANTXR1Q9H6X2 564 aa12.1□□□□□ -0.47
RHOXF1P3-201ENST00000635058 DNAJC18Q9H819 358 aa12.1□□□□□ -0.47
RHOXF1P3-201ENST00000635058 MORF4L1Q9UBU8 362 aa12.1□□□□□ -0.47
RHOXF1P3-201ENST00000635058 COG6Q9Y2V7 657 aa12.1□□□□□ -0.47
RHOXF1P3-201ENST00000635058 NDUFB9Q9Y6M9 179 aa12.1□□□□□ -0.47
RHOXF1P3-201ENST00000635058 DOCK2Q92608 1830 aa12.09□□□□□ -0.47
RHOXF1P3-201ENST00000635058 HMGCRP04035 888 aa12.09□□□□□ -0.47
RHOXF1P3-201ENST00000635058 MAPK4P31152 587 aa12.09□□□□□ -0.47
RHOXF1P3-201ENST00000635058 HERVK_113P62684 666 aa12.09□□□□□ -0.47
RHOXF1P3-201ENST00000635058 RAB3GAP1Q15042 981 aa12.09□□□□□ -0.47
RHOXF1P3-201ENST00000635058 ABCB5Q2M3G0 1257 aa12.09□□□□□ -0.47
RHOXF1P3-201ENST00000635058 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.09□□□□□ -0.47
RHOXF1P3-201ENST00000635058 DNAJC2Q99543 621 aaKnown RBP12.09□□□□□ -0.47
RHOXF1P3-201ENST00000635058 NUDT12Q9BQG2 462 aa12.09□□□□□ -0.47
RHOXF1P3-201ENST00000635058 HMX1Q9NP08 348 aaPredicted RBP12.09□□□□□ -0.47
RHOXF1P3-201ENST00000635058 ZBTB40Q9NUA8 1239 aa12.09□□□□□ -0.47
RHOXF1P3-201ENST00000635058 GJD2Q9UKL4 321 aa12.09□□□□□ -0.47
RHOXF1P3-201ENST00000635058 USP17L15C9J2P7 530 aa12.08□□□□□ -0.48
RHOXF1P3-201ENST00000635058 USP17L13C9JLJ4 530 aa12.08□□□□□ -0.48
RHOXF1P3-201ENST00000635058 USP17L11C9JVI0 530 aa12.08□□□□□ -0.48
RHOXF1P3-201ENST00000635058 USP17L18D6R9N7 530 aa12.08□□□□□ -0.48
RHOXF1P3-201ENST00000635058 USP17L22D6RA61 530 aa12.08□□□□□ -0.48
RHOXF1P3-201ENST00000635058 USP17L17D6RBQ6 530 aa12.08□□□□□ -0.48
RHOXF1P3-201ENST00000635058 USP17L19D6RCP7 530 aa12.08□□□□□ -0.48
RHOXF1P3-201ENST00000635058 USP17L20D6RJB6 530 aa12.08□□□□□ -0.48
RHOXF1P3-201ENST00000635058 GOLIM4O00461 696 aa12.08□□□□□ -0.48
RHOXF1P3-201ENST00000635058 GLRX3O76003 335 aaKnown RBP12.08□□□□□ -0.48
RHOXF1P3-201ENST00000635058 JAG1P78504 1218 aa12.08□□□□□ -0.48
RHOXF1P3-201ENST00000635058 USP17L24Q0WX57 530 aa12.08□□□□□ -0.48
RHOXF1P3-201ENST00000635058 TRMT44Q8IYL2 757 aaKnown RBP12.08□□□□□ -0.48
RHOXF1P3-201ENST00000635058 EMILIN3Q9NT22 766 aa12.08□□□□□ -0.48
RHOXF1P3-201ENST00000635058 RCAN3Q9UKA8 241 aa12.08□□□□□ -0.48
RHOXF1P3-201ENST00000635058 COLQQ9Y215 455 aaPredicted RBP12.08□□□□□ -0.48
RHOXF1P3-201ENST00000635058 RPTORQ8N122 1335 aa12.08□□□□□ -0.48
RHOXF1P3-201ENST00000635058 MKI67P46013 3256 aaKnown RBP12.07□□□□□ -0.48
RHOXF1P3-201ENST00000635058 EVI5O60447 810 aa12.07□□□□□ -0.48
RHOXF1P3-201ENST00000635058 XRCC5P13010 732 aaKnown RBP12.07□□□□□ -0.48
RHOXF1P3-201ENST00000635058 PDE6AP16499 860 aa12.07□□□□□ -0.48
RHOXF1P3-201ENST00000635058 CYP2B6P20813 491 aa12.07□□□□□ -0.48
RHOXF1P3-201ENST00000635058 CCNA1P78396 465 aa12.07□□□□□ -0.48
RHOXF1P3-201ENST00000635058 ZYXQ15942 572 aaKnown RBP12.07□□□□□ -0.48
RHOXF1P3-201ENST00000635058 UBE2Q1Q7Z7E8 422 aa12.07□□□□□ -0.48
RHOXF1P3-201ENST00000635058 SOCS4Q8WXH5 440 aa12.07□□□□□ -0.48
RHOXF1P3-201ENST00000635058 DDRGK1Q96HY6 314 aa12.07□□□□□ -0.48
RHOXF1P3-201ENST00000635058 RIOK1Q9BRS2 568 aaKnown RBP12.07□□□□□ -0.48
RHOXF1P3-201ENST00000635058 PAGR1Q9BTK6 254 aa12.07□□□□□ -0.48
RHOXF1P3-201ENST00000635058 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.07□□□□□ -0.48
RHOXF1P3-201ENST00000635058 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.07□□□□□ -0.48
RHOXF1P3-201ENST00000635058 PAK6Q9NQU5 681 aaPredicted RBP12.07□□□□□ -0.48
RHOXF1P3-201ENST00000635058 MCM9Q9NXL9 1143 aa12.07□□□□□ -0.48
RHOXF1P3-201ENST00000635058 RBPJLQ9UBG7 517 aa12.07□□□□□ -0.48
RHOXF1P3-201ENST00000635058 RBBP6Q7Z6E9 1792 aaKnown RBP12.07□□□□□ -0.48
RHOXF1P3-201ENST00000635058 DOCK1Q14185 1865 aa12.06□□□□□ -0.48
RHOXF1P3-201ENST00000635058 MPHOSPH10O00566 681 aaKnown RBP12.06□□□□□ -0.48
RHOXF1P3-201ENST00000635058 PLCD1P51178 756 aa12.06□□□□□ -0.48
RHOXF1P3-201ENST00000635058 ERVK-9P63128 1117 aa12.06□□□□□ -0.48
RHOXF1P3-201ENST00000635058 ERVK-24P63145 666 aa12.06□□□□□ -0.48
RHOXF1P3-201ENST00000635058 SHROOM1Q2M3G4 852 aaPredicted RBP12.06□□□□□ -0.48
RHOXF1P3-201ENST00000635058 NECAB2Q7Z6G3 386 aa12.06□□□□□ -0.48
RHOXF1P3-201ENST00000635058 PLEKHH3Q7Z736 793 aa12.06□□□□□ -0.48
RHOXF1P3-201ENST00000635058 AMOTL1Q8IY63 956 aa12.06□□□□□ -0.48
RHOXF1P3-201ENST00000635058 ANKLE1Q8NAG6 615 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms