RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 PARK7Q99497 189 aaKnown RBP18.86■□□□□ 0.61
LINC00339-207ENST00000634712 CABP5Q9NP86 173 aa18.86■□□□□ 0.61
LINC00339-207ENST00000634712 STAP2Q9UGK3 403 aa18.86■□□□□ 0.61
LINC00339-207ENST00000634712 MOGSQ13724 837 aa18.85■□□□□ 0.61
LINC00339-207ENST00000634712 KIF22Q14807 665 aa18.85■□□□□ 0.61
LINC00339-207ENST00000634712 GPAT2Q6NUI2 795 aa18.85■□□□□ 0.61
LINC00339-207ENST00000634712 CHD1LQ86WJ1 897 aa18.85■□□□□ 0.61
LINC00339-207ENST00000634712 ZBTB21Q9ULJ3 1066 aa18.85■□□□□ 0.61
LINC00339-207ENST00000634712 SIPA1L1O43166 1804 aa18.85■□□□□ 0.61
LINC00339-207ENST00000634712 SALL3Q9BXA9 1300 aa18.85■□□□□ 0.61
LINC00339-207ENST00000634712 CCDC85CA6NKD9 419 aa18.84■□□□□ 0.61
LINC00339-207ENST00000634712 GH2P01242 217 aa18.84■□□□□ 0.61
LINC00339-207ENST00000634712 ABCB5Q2M3G0 1257 aa18.84■□□□□ 0.61
LINC00339-207ENST00000634712 PROCA1Q8NCQ7 364 aaPredicted RBP18.84■□□□□ 0.61
LINC00339-207ENST00000634712 CD99L2Q8TCZ2 262 aa18.84■□□□□ 0.61
LINC00339-207ENST00000634712 OSBP2Q969R2 916 aa18.84■□□□□ 0.61
LINC00339-207ENST00000634712 STRBPQ96SI9 672 aaKnown RBP18.84■□□□□ 0.61
LINC00339-207ENST00000634712 WDR18Q9BV38 432 aa18.84■□□□□ 0.61
LINC00339-207ENST00000634712 TMOD4Q9NZQ9 345 aa18.84■□□□□ 0.61
LINC00339-207ENST00000634712 TRIM17Q9Y577 477 aa18.84■□□□□ 0.61
LINC00339-207ENST00000634712 NAV1Q8NEY1 1877 aa18.83■□□□□ 0.61
LINC00339-207ENST00000634712 USP17L12C9JPN9 530 aa18.83■□□□□ 0.61
LINC00339-207ENST00000634712 USP17L21D6R901 530 aa18.83■□□□□ 0.61
LINC00339-207ENST00000634712 GNAT2P19087 354 aa18.83■□□□□ 0.61
LINC00339-207ENST00000634712 HMGCS2P54868 508 aa18.83■□□□□ 0.61
LINC00339-207ENST00000634712 NUCB1Q02818 461 aa18.83■□□□□ 0.61
LINC00339-207ENST00000634712 PABPC4Q13310 644 aaKnown RBP eCLIP18.83■□□□□ 0.613e-16■■■■■ 34.8
LINC00339-207ENST00000634712 RAB3GAP1Q15042 981 aa18.83■□□□□ 0.61
LINC00339-207ENST00000634712 EVI5LQ96CN4 794 aa18.83■□□□□ 0.61
LINC00339-207ENST00000634712 EFCC1Q9HA90 598 aa18.83■□□□□ 0.61
LINC00339-207ENST00000634712 SWAP70Q9UH65 585 aa18.83■□□□□ 0.61
LINC00339-207ENST00000634712 CPA4Q9UI42 421 aa18.83■□□□□ 0.61
LINC00339-207ENST00000634712 AGTPBP1Q9UPW5 1226 aa18.83■□□□□ 0.61
LINC00339-207ENST00000634712 SLC45A1Q9Y2W3 748 aa18.83■□□□□ 0.61
LINC00339-207ENST00000634712 ATAD5Q96QE3 1844 aa18.83■□□□□ 0.61
LINC00339-207ENST00000634712 C19orf81C9J6K1 198 aa18.82■□□□□ 0.6
LINC00339-207ENST00000634712 USP17L10C9JJH3 530 aa18.82■□□□□ 0.6
LINC00339-207ENST00000634712 MPHOSPH10O00566 681 aaKnown RBP18.82■□□□□ 0.6
LINC00339-207ENST00000634712 APPP05067 770 aa18.82■□□□□ 0.6
LINC00339-207ENST00000634712 CYP2D6P10635 497 aa18.82■□□□□ 0.6
LINC00339-207ENST00000634712 SHMT1P34896 483 aa18.82■□□□□ 0.6
LINC00339-207ENST00000634712 JAG1P78504 1218 aa18.82■□□□□ 0.6
LINC00339-207ENST00000634712 PNMA3Q9UL41 463 aa18.82■□□□□ 0.6
LINC00339-207ENST00000634712 TAOK2Q9UL54 1235 aa18.82■□□□□ 0.6
LINC00339-207ENST00000634712 TRIM6-TRIM34B2RNG4 842 aa18.81■□□□□ 0.6
LINC00339-207ENST00000634712 GPAA1O43292 621 aa18.81■□□□□ 0.6
LINC00339-207ENST00000634712 CYP2C8P10632 490 aa18.81■□□□□ 0.6
LINC00339-207ENST00000634712 BACE1P56817 501 aa18.81■□□□□ 0.6
LINC00339-207ENST00000634712 GABPAQ06546 454 aa18.81■□□□□ 0.6
LINC00339-207ENST00000634712 MTMR2Q13614 643 aa18.81■□□□□ 0.6
LINC00339-207ENST00000634712 SHROOM1Q2M3G4 852 aaPredicted RBP18.81■□□□□ 0.6
LINC00339-207ENST00000634712 C12orf60Q5U649 245 aa18.81■□□□□ 0.6
LINC00339-207ENST00000634712 FBXO46Q6PJ61 603 aaPredicted RBP18.81■□□□□ 0.6
LINC00339-207ENST00000634712 C17orf99Q6UX52 265 aa18.81■□□□□ 0.6
LINC00339-207ENST00000634712 SMCR8Q8TEV9 937 aaPredicted RBP18.81■□□□□ 0.6
LINC00339-207ENST00000634712 PHIPQ8WWQ0 1821 aa18.81■□□□□ 0.6
LINC00339-207ENST00000634712 OSBPP22059 807 aa18.81■□□□□ 0.6
LINC00339-207ENST00000634712 SH3D19Q5HYK7 790 aa18.81■□□□□ 0.6
LINC00339-207ENST00000634712 GIMAP6Q6P9H5 292 aa18.81■□□□□ 0.6
LINC00339-207ENST00000634712 CTR9Q6PD62 1173 aa18.81■□□□□ 0.6
LINC00339-207ENST00000634712 OTOP1Q7RTM1 612 aa18.81■□□□□ 0.6
LINC00339-207ENST00000634712 DYNLL2Q96FJ2 89 aa18.81■□□□□ 0.6
LINC00339-207ENST00000634712 FEZ1Q99689 392 aa18.81■□□□□ 0.6
LINC00339-207ENST00000634712 ARPP21Q9UBL0 812 aaPredicted RBP18.81■□□□□ 0.6
LINC00339-207ENST00000634712 M0R2C6 588 aa18.8■□□□□ 0.6
LINC00339-207ENST00000634712 TDO2P48775 406 aa18.8■□□□□ 0.6
LINC00339-207ENST00000634712 TREML2Q5T2D2 321 aa18.8■□□□□ 0.6
LINC00339-207ENST00000634712 RILPL2Q969X0 211 aa18.8■□□□□ 0.6
LINC00339-207ENST00000634712 NACAP1Q9BZK3 213 aa18.8■□□□□ 0.6
LINC00339-207ENST00000634712 CYP2D7A0A087X1C5 515 aa18.79■□□□□ 0.6
LINC00339-207ENST00000634712 GSG1L2A8MUP6 293 aa18.79■□□□□ 0.6
LINC00339-207ENST00000634712 PATL2C9JE40 543 aaKnown RBP18.79■□□□□ 0.6
LINC00339-207ENST00000634712 LACTBP83111 547 aaPredicted RBP18.79■□□□□ 0.6
LINC00339-207ENST00000634712 EVX2Q03828 476 aa18.79■□□□□ 0.6
LINC00339-207ENST00000634712 ZMYM1Q5SVZ6 1142 aa18.79■□□□□ 0.6
LINC00339-207ENST00000634712 USP17L2Q6R6M4 530 aa18.79■□□□□ 0.6
LINC00339-207ENST00000634712 SLC44A5Q8NCS7 719 aa18.79■□□□□ 0.6
LINC00339-207ENST00000634712 SEC62Q99442 399 aaKnown RBP18.79■□□□□ 0.6
LINC00339-207ENST00000634712 PTPRFP10586 1907 aa18.78■□□□□ 0.6
LINC00339-207ENST00000634712 BAZ2AQ9UIF9 1905 aaKnown RBP18.78■□□□□ 0.6
LINC00339-207ENST00000634712 MINDY4BA8MYZ0 360 aa18.78■□□□□ 0.6
LINC00339-207ENST00000634712 ECM2O94769 699 aaPredicted RBP18.78■□□□□ 0.6
LINC00339-207ENST00000634712 CDK8P49336 464 aa18.78■□□□□ 0.6
LINC00339-207ENST00000634712 USP14P54578 494 aa18.78■□□□□ 0.6
LINC00339-207ENST00000634712 SBK1Q52WX2 424 aa18.78■□□□□ 0.6
LINC00339-207ENST00000634712 PLEKHM2Q8IWE5 1019 aa18.78■□□□□ 0.6
LINC00339-207ENST00000634712 CCDC17Q96LX7 622 aa18.78■□□□□ 0.6
LINC00339-207ENST00000634712 HPS5Q9UPZ3 1129 aa18.78■□□□□ 0.6
LINC00339-207ENST00000634712 DDX60LQ5H9U9 1706 aaKnown RBP18.77■□□□□ 0.6
LINC00339-207ENST00000634712 FMNL1O95466 1100 aaPredicted RBP18.77■□□□□ 0.6
LINC00339-207ENST00000634712 IRX3P78415 501 aaPredicted RBP18.77■□□□□ 0.6
LINC00339-207ENST00000634712 SEPT2Q15019 361 aa18.77■□□□□ 0.6
LINC00339-207ENST00000634712 ZYXQ15942 572 aaKnown RBP18.77■□□□□ 0.6
LINC00339-207ENST00000634712 TMEM179Q6ZVK1 233 aa18.77■□□□□ 0.6
LINC00339-207ENST00000634712 C16orf86Q6ZW13 317 aa18.77■□□□□ 0.6
LINC00339-207ENST00000634712 TICAM2Q86XR7 235 aa18.77■□□□□ 0.6
LINC00339-207ENST00000634712 PTPN22Q9Y2R2 807 aa18.77■□□□□ 0.6
LINC00339-207ENST00000634712 ADGRA2Q96PE1 1338 aa18.76■□□□□ 0.59
LINC00339-207ENST00000634712 GNRH1P01148 92 aa18.76■□□□□ 0.59
LINC00339-207ENST00000634712 HOXD10P28358 340 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms