RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 MYH16Q9H6N6 1097 aa6.01□□□□□ -1.45
LINC00550-201ENST00000629293 ELP3Q9H9T3 547 aa6.01□□□□□ -1.45
LINC00550-201ENST00000629293 ANKRD36CQ5JPF3 1778 aa6.01□□□□□ -1.45
LINC00550-201ENST00000629293 THSD7BQ9C0I4 1608 aa6.01□□□□□ -1.45
LINC00550-201ENST00000629293 TCP10L2B9ZVM9 353 aa6.01□□□□□ -1.45
LINC00550-201ENST00000629293 IGF2BP3O00425 579 aaKnown RBP eCLIP6.01□□□□□ -1.45
LINC00550-201ENST00000629293 LDHAL6AQ6ZMR3 332 aa6.01□□□□□ -1.45
LINC00550-201ENST00000629293 CERS5Q8N5B7 392 aa6.01□□□□□ -1.45
LINC00550-201ENST00000629293 PRMT6Q96LA8 375 aaPredicted RBP6.01□□□□□ -1.45
LINC00550-201ENST00000629293 DDX60Q8IY21 1712 aaKnown RBP6.01□□□□□ -1.45
LINC00550-201ENST00000629293 JUNDP17535 347 aa6□□□□□ -1.45
LINC00550-201ENST00000629293 TM4SF4P48230 202 aa6□□□□□ -1.45
LINC00550-201ENST00000629293 ARHGAP4P98171 946 aa6□□□□□ -1.45
LINC00550-201ENST00000629293 RASA3Q14644 834 aa6□□□□□ -1.45
LINC00550-201ENST00000629293 CCDC57Q2TAC2 916 aa6□□□□□ -1.45
LINC00550-201ENST00000629293 C20orf194Q5TEA3 1177 aa6□□□□□ -1.45
LINC00550-201ENST00000629293 LMBR1LQ6UX01 489 aa6□□□□□ -1.45
LINC00550-201ENST00000629293 OTOP1Q7RTM1 612 aa6□□□□□ -1.45
LINC00550-201ENST00000629293 ZNF804AQ7Z570 1209 aa6□□□□□ -1.45
LINC00550-201ENST00000629293 VPS37DQ86XT2 251 aa6□□□□□ -1.45
LINC00550-201ENST00000629293 EFCC1Q9HA90 598 aa6□□□□□ -1.45
LINC00550-201ENST00000629293 EGFL7Q9UHF1 273 aa6□□□□□ -1.45
LINC00550-201ENST00000629293 AOX1Q06278 1338 aa6□□□□□ -1.45
LINC00550-201ENST00000629293 LZTS3O60299 673 aaPredicted RBP6□□□□□ -1.45
LINC00550-201ENST00000629293 CACNB3P54284 484 aa6□□□□□ -1.45
LINC00550-201ENST00000629293 MARSP56192 900 aaKnown RBP6□□□□□ -1.45
LINC00550-201ENST00000629293 CRHR2Q13324 411 aa6□□□□□ -1.45
LINC00550-201ENST00000629293 SLC4A8Q2Y0W8 1093 aa6□□□□□ -1.45
LINC00550-201ENST00000629293 SUPT20HL1Q3ZLR7 823 aa6□□□□□ -1.45
LINC00550-201ENST00000629293 MFSD14BQ5SR56 506 aa6□□□□□ -1.45
LINC00550-201ENST00000629293 CAPN12Q6ZSI9 719 aa6□□□□□ -1.45
LINC00550-201ENST00000629293 SH3BP5LQ7L8J4 393 aa6□□□□□ -1.45
LINC00550-201ENST00000629293 CDAN1Q8IWY9 1227 aa6□□□□□ -1.45
LINC00550-201ENST00000629293 TDRD3Q9H7E2 651 aaKnown RBP6□□□□□ -1.45
LINC00550-201ENST00000629293 C9orf78Q9NZ63 289 aaPredicted RBP6□□□□□ -1.45
LINC00550-201ENST00000629293 MANSC4A6NHS7 340 aaPredicted RBP6□□□□□ -1.45
LINC00550-201ENST00000629293 EN2P19622 333 aaPredicted RBP6□□□□□ -1.45
LINC00550-201ENST00000629293 GYG1P46976 350 aa6□□□□□ -1.45
LINC00550-201ENST00000629293 IREB2P48200 963 aaKnown RBP6□□□□□ -1.45
LINC00550-201ENST00000629293 OTUD7BQ6GQQ9 843 aa6□□□□□ -1.45
LINC00550-201ENST00000629293 FAM160A2Q8N612 972 aaPredicted RBP6□□□□□ -1.45
LINC00550-201ENST00000629293 CXXC1Q9P0U4 656 aaPredicted RBP6□□□□□ -1.45
LINC00550-201ENST00000629293 TTF2Q9UNY4 1162 aaKnown RBP6□□□□□ -1.45
LINC00550-201ENST00000629293 H7C1W4 665 aa5.99□□□□□ -1.45
LINC00550-201ENST00000629293 ALDH1A1P00352 501 aa5.99□□□□□ -1.45
LINC00550-201ENST00000629293 Q3C1V9 767 aa5.99□□□□□ -1.45
LINC00550-201ENST00000629293 PDXDC2PQ6P474 469 aa5.99□□□□□ -1.45
LINC00550-201ENST00000629293 OTUD5Q96G74 571 aa5.99□□□□□ -1.45
LINC00550-201ENST00000629293 WNK4Q96J92 1243 aa5.99□□□□□ -1.45
LINC00550-201ENST00000629293 ZFRQ96KR1 1074 aaKnown RBP5.99□□□□□ -1.45
LINC00550-201ENST00000629293 TAF1CQ15572 869 aaPredicted RBP5.99□□□□□ -1.45
LINC00550-201ENST00000629293 SH3RF1Q7Z6J0 888 aa5.99□□□□□ -1.45
LINC00550-201ENST00000629293 LINS1Q8NG48 757 aa5.99□□□□□ -1.45
LINC00550-201ENST00000629293 GIPC2Q8TF65 315 aa5.99□□□□□ -1.45
LINC00550-201ENST00000629293 PURBQ96QR8 312 aaKnown RBP5.99□□□□□ -1.45
LINC00550-201ENST00000629293 TMEM39BQ9GZU3 492 aa5.99□□□□□ -1.45
LINC00550-201ENST00000629293 EVA1BQ9NVM1 165 aa5.99□□□□□ -1.45
LINC00550-201ENST00000629293 LRRC37AA6NMS7 1700 aa5.99□□□□□ -1.45
LINC00550-201ENST00000629293 TCF3P15923 654 aa5.99□□□□□ -1.45
LINC00550-201ENST00000629293 SP3Q02447 781 aa5.99□□□□□ -1.45
LINC00550-201ENST00000629293 EXOSC9Q06265 439 aaKnown RBP5.99□□□□□ -1.45
LINC00550-201ENST00000629293 OPTNQ96CV9 577 aa5.99□□□□□ -1.45
LINC00550-201ENST00000629293 NOP58Q9Y2X3 529 aaKnown RBP5.99□□□□□ -1.45
LINC00550-201ENST00000629293 PCDHGA11Q9Y5H2 935 aa5.99□□□□□ -1.45
LINC00550-201ENST00000629293 DXOO77932 396 aaKnown RBP5.98□□□□□ -1.45
LINC00550-201ENST00000629293 SLC9C1Q4G0N8 1177 aa5.98□□□□□ -1.45
LINC00550-201ENST00000629293 EPHA10Q5JZY3 1008 aa5.98□□□□□ -1.45
LINC00550-201ENST00000629293 BACH2Q9BYV9 841 aa5.98□□□□□ -1.45
LINC00550-201ENST00000629293 PAPPA2Q9BXP8 1791 aa5.98□□□□□ -1.45
LINC00550-201ENST00000629293 CCL15-CCL14A0A0B4J2E2 113 aa5.98□□□□□ -1.45
LINC00550-201ENST00000629293 CCL15Q16663 113 aa5.98□□□□□ -1.45
LINC00550-201ENST00000629293 SCUBE3Q8IX30 993 aa5.98□□□□□ -1.45
LINC00550-201ENST00000629293 ANKRD13AQ8IZ07 590 aa5.98□□□□□ -1.45
LINC00550-201ENST00000629293 ERO1AQ96HE7 468 aa5.98□□□□□ -1.45
LINC00550-201ENST00000629293 IPO9Q96P70 1041 aaKnown RBP5.98□□□□□ -1.45
LINC00550-201ENST00000629293 PUS3Q9BZE2 481 aaKnown RBP5.98□□□□□ -1.45
LINC00550-201ENST00000629293 CSADQ9Y600 493 aa5.98□□□□□ -1.45
LINC00550-201ENST00000629293 MMP16P51512 607 aa5.97□□□□□ -1.45
LINC00550-201ENST00000629293 INHBEP58166 350 aa5.97□□□□□ -1.45
LINC00550-201ENST00000629293 SH3TC2Q8TF17 1288 aa5.97□□□□□ -1.45
LINC00550-201ENST00000629293 PTPN18Q99952 460 aa5.97□□□□□ -1.45
LINC00550-201ENST00000629293 BIN2Q9UBW5 565 aaPredicted RBP5.97□□□□□ -1.45
LINC00550-201ENST00000629293 ICMTO60725 284 aa5.97□□□□□ -1.45
LINC00550-201ENST00000629293 USP2O75604 605 aaPredicted RBP5.97□□□□□ -1.45
LINC00550-201ENST00000629293 ZBTB48P10074 688 aaPredicted RBP5.97□□□□□ -1.45
LINC00550-201ENST00000629293 HIBADHP31937 336 aaKnown RBP5.97□□□□□ -1.45
LINC00550-201ENST00000629293 ANP32AP39687 249 aaKnown RBP5.97□□□□□ -1.45
LINC00550-201ENST00000629293 TNFAIP1Q13829 316 aa5.97□□□□□ -1.45
LINC00550-201ENST00000629293 CENPQQ7L2Z9 268 aaPredicted RBP5.97□□□□□ -1.45
LINC00550-201ENST00000629293 RNF135Q8IUD6 432 aa5.97□□□□□ -1.45
LINC00550-201ENST00000629293 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.97□□□□□ -1.45
LINC00550-201ENST00000629293 ZNF70Q9UC06 446 aaPredicted RBP5.97□□□□□ -1.45
LINC00550-201ENST00000629293 TTC28Q96AY4 2481 aa5.97□□□□□ -1.45
LINC00550-201ENST00000629293 WDHD1O75717 1129 aaPredicted RBP5.97□□□□□ -1.45
LINC00550-201ENST00000629293 CSF1RP07333 972 aa5.97□□□□□ -1.45
LINC00550-201ENST00000629293 VGLL4Q14135 290 aa5.97□□□□□ -1.45
LINC00550-201ENST00000629293 MAP7D1Q3KQU3 841 aa5.97□□□□□ -1.45
LINC00550-201ENST00000629293 MSS51Q4VC12 460 aa5.97□□□□□ -1.45
LINC00550-201ENST00000629293 HABP4Q5JVS0 413 aaKnown RBP5.97□□□□□ -1.45
LINC00550-201ENST00000629293 MIGA2Q7L4E1 593 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms