RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 GINM1Q9NU53 330 aa11.88□□□□□ -0.51
FOXCUT-201ENST00000628509 RBM28Q9NW13 759 aaKnown RBP11.88□□□□□ -0.51
FOXCUT-201ENST00000628509 ZNF70Q9UC06 446 aaPredicted RBP11.88□□□□□ -0.51
FOXCUT-201ENST00000628509 SAP30BPQ9UHR5 308 aaKnown RBP11.88□□□□□ -0.51
FOXCUT-201ENST00000628509 CDK5RAP2Q96SN8 1893 aa11.88□□□□□ -0.51
FOXCUT-201ENST00000628509 ATRNL1Q5VV63 1379 aa11.88□□□□□ -0.51
FOXCUT-201ENST00000628509 NEDD4P46934 1319 aa11.87□□□□□ -0.51
FOXCUT-201ENST00000628509 SBF1O95248 1867 aa11.87□□□□□ -0.51
FOXCUT-201ENST00000628509 SH2B2O14492 632 aaPredicted RBP11.87□□□□□ -0.51
FOXCUT-201ENST00000628509 ZBTB43O43298 467 aa11.87□□□□□ -0.51
FOXCUT-201ENST00000628509 CDK8P49336 464 aa11.87□□□□□ -0.51
FOXCUT-201ENST00000628509 GNAQP50148 359 aa11.87□□□□□ -0.51
FOXCUT-201ENST00000628509 TOB2Q14106 344 aaPredicted RBP11.87□□□□□ -0.51
FOXCUT-201ENST00000628509 C9orf131Q5VYM1 1079 aa11.87□□□□□ -0.51
FOXCUT-201ENST00000628509 DCAF15Q66K64 600 aa11.87□□□□□ -0.51
FOXCUT-201ENST00000628509 LHX8Q68G74 356 aa11.87□□□□□ -0.51
FOXCUT-201ENST00000628509 NOL8Q76FK4 1167 aaKnown RBP11.87□□□□□ -0.51
FOXCUT-201ENST00000628509 FAM184AQ8NB25 1140 aa11.87□□□□□ -0.51
FOXCUT-201ENST00000628509 WASF1Q92558 559 aa11.87□□□□□ -0.51
FOXCUT-201ENST00000628509 PRMT6Q96LA8 375 aaPredicted RBP11.87□□□□□ -0.51
FOXCUT-201ENST00000628509 KAT14Q9H8E8 782 aa11.87□□□□□ -0.51
FOXCUT-201ENST00000628509 VEZTQ9HBM0 779 aa11.87□□□□□ -0.51
FOXCUT-201ENST00000628509 ADARB2Q9NS39 739 aaKnown RBP11.87□□□□□ -0.51
FOXCUT-201ENST00000628509 GPRC5DQ9NZD1 345 aa11.87□□□□□ -0.51
FOXCUT-201ENST00000628509 RBM27Q9P2N5 1060 aaKnown RBP11.87□□□□□ -0.51
FOXCUT-201ENST00000628509 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.87□□□□□ -0.51
FOXCUT-201ENST00000628509 ATP6V1DQ9Y5K8 247 aa11.87□□□□□ -0.51
FOXCUT-201ENST00000628509 TNKSO95271 1327 aa11.86□□□□□ -0.51
FOXCUT-201ENST00000628509 MYH8P13535 1937 aa11.86□□□□□ -0.51
FOXCUT-201ENST00000628509 KLF18A0A0U1RQI7 1052 aa11.86□□□□□ -0.51
FOXCUT-201ENST00000628509 GOLGA8BA8MQT2 603 aa11.86□□□□□ -0.51
FOXCUT-201ENST00000628509 WNT10BO00744 389 aa11.86□□□□□ -0.51
FOXCUT-201ENST00000628509 PFKFB2O60825 505 aa11.86□□□□□ -0.51
FOXCUT-201ENST00000628509 DDAH1O94760 285 aa11.86□□□□□ -0.51
FOXCUT-201ENST00000628509 METAP2P50579 478 aaKnown RBP eCLIP11.86□□□□□ -0.51
FOXCUT-201ENST00000628509 TFAP4Q01664 338 aa11.86□□□□□ -0.51
FOXCUT-201ENST00000628509 TRIM22Q8IYM9 498 aa11.86□□□□□ -0.51
FOXCUT-201ENST00000628509 RGS22Q8NE09 1264 aa11.86□□□□□ -0.51
FOXCUT-201ENST00000628509 NEDD1Q8NHV4 660 aa11.86□□□□□ -0.51
FOXCUT-201ENST00000628509 CTCFLQ8NI51 663 aaPredicted RBP11.86□□□□□ -0.51
FOXCUT-201ENST00000628509 CSRNP1Q96S65 589 aa11.86□□□□□ -0.51
FOXCUT-201ENST00000628509 MAP3K14Q99558 947 aa11.86□□□□□ -0.51
FOXCUT-201ENST00000628509 DDX60LQ5H9U9 1706 aaKnown RBP11.86□□□□□ -0.51
FOXCUT-201ENST00000628509 PITPNM2Q9BZ72 1349 aa11.86□□□□□ -0.51
FOXCUT-201ENST00000628509 TBC1D12O60347 775 aa11.85□□□□□ -0.51
FOXCUT-201ENST00000628509 CPA1P15085 419 aa11.85□□□□□ -0.51
FOXCUT-201ENST00000628509 XBP1P17861 261 aa11.85□□□□□ -0.51
FOXCUT-201ENST00000628509 AKAP17AQ02040 695 aaKnown RBP11.85□□□□□ -0.51
FOXCUT-201ENST00000628509 TCP10Q12799 353 aa11.85□□□□□ -0.51
FOXCUT-201ENST00000628509 RBM26Q5T8P6 1007 aaKnown RBP11.85□□□□□ -0.51
FOXCUT-201ENST00000628509 IGDCC4Q8TDY8 1250 aa11.85□□□□□ -0.51
FOXCUT-201ENST00000628509 GTF3C6Q969F1 213 aa11.85□□□□□ -0.51
FOXCUT-201ENST00000628509 NBPF3Q9H094 633 aa11.85□□□□□ -0.51
FOXCUT-201ENST00000628509 TPCN1Q9ULQ1 816 aa11.85□□□□□ -0.51
FOXCUT-201ENST00000628509 SYNPO2Q9UMS6 1093 aa11.85□□□□□ -0.51
FOXCUT-201ENST00000628509 COL4A5P29400 1685 aa11.84□□□□□ -0.51
FOXCUT-201ENST00000628509 PLIN4Q96Q06 1357 aa11.84□□□□□ -0.51
FOXCUT-201ENST00000628509 GOLGA8AA7E2F4 631 aa11.84□□□□□ -0.51
FOXCUT-201ENST00000628509 TCP10L2B9ZVM9 353 aa11.84□□□□□ -0.51
FOXCUT-201ENST00000628509 YBX3P16989 372 aaKnown RBP eCLIP11.84□□□□□ -0.51
FOXCUT-201ENST00000628509 PTMSP20962 102 aa11.84□□□□□ -0.51
FOXCUT-201ENST00000628509 PDIA3P30101 505 aaKnown RBP11.84□□□□□ -0.51
FOXCUT-201ENST00000628509 PLCD1P51178 756 aa11.84□□□□□ -0.51
FOXCUT-201ENST00000628509 APOBRQ0VD83 1088 aa11.84□□□□□ -0.51
FOXCUT-201ENST00000628509 ME3Q16798 604 aa11.84□□□□□ -0.51
FOXCUT-201ENST00000628509 SUPT20HL1Q3ZLR7 823 aa11.84□□□□□ -0.51
FOXCUT-201ENST00000628509 CERKLQ49MI3 558 aaPredicted RBP11.84□□□□□ -0.51
FOXCUT-201ENST00000628509 TMEM179Q6ZVK1 233 aa11.84□□□□□ -0.51
FOXCUT-201ENST00000628509 USP50Q70EL3 339 aaPredicted RBP11.84□□□□□ -0.51
FOXCUT-201ENST00000628509 PNMA8AQ86V59 439 aaPredicted RBP11.84□□□□□ -0.51
FOXCUT-201ENST00000628509 CCDC83Q8IWF9 413 aa11.84□□□□□ -0.51
FOXCUT-201ENST00000628509 STK11IPQ8N1F8 1099 aa11.84□□□□□ -0.51
FOXCUT-201ENST00000628509 ZC3H15Q8WU90 426 aaKnown RBP11.84□□□□□ -0.51
FOXCUT-201ENST00000628509 ANKS1AQ92625 1134 aa11.84□□□□□ -0.51
FOXCUT-201ENST00000628509 DCPSQ96C86 337 aaKnown RBP11.84□□□□□ -0.51
FOXCUT-201ENST00000628509 ZBED3Q96IU2 234 aaPredicted RBP11.84□□□□□ -0.51
FOXCUT-201ENST00000628509 TCEANC2Q96MN5 208 aa11.84□□□□□ -0.51
FOXCUT-201ENST00000628509 LZTS2Q9BRK4 669 aa11.84□□□□□ -0.51
FOXCUT-201ENST00000628509 SH2D4AQ9H788 454 aa11.84□□□□□ -0.51
FOXCUT-201ENST00000628509 KANSL2Q9H9L4 492 aa11.84□□□□□ -0.51
FOXCUT-201ENST00000628509 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.84□□□□□ -0.51
FOXCUT-201ENST00000628509 LY9Q9HBG7 655 aa11.84□□□□□ -0.51
FOXCUT-201ENST00000628509 WDR33Q9C0J8 1336 aaKnown RBP11.84□□□□□ -0.51
FOXCUT-201ENST00000628509 ZNF541Q9H0D2 1346 aa11.84□□□□□ -0.51
FOXCUT-201ENST00000628509 CYP2D7A0A087X1C5 515 aa11.83□□□□□ -0.52
FOXCUT-201ENST00000628509 CLRN2A0PK11 232 aa11.83□□□□□ -0.52
FOXCUT-201ENST00000628509 GLTPD2A6NH11 291 aa11.83□□□□□ -0.52
FOXCUT-201ENST00000628509 GOLGA6L22H0YM25 854 aa11.83□□□□□ -0.52
FOXCUT-201ENST00000628509 PRDM1O75626 825 aa11.83□□□□□ -0.52
FOXCUT-201ENST00000628509 CD2BP2O95400 341 aaKnown RBP11.83□□□□□ -0.52
FOXCUT-201ENST00000628509 TTLL1O95922 423 aa11.83□□□□□ -0.52
FOXCUT-201ENST00000628509 CYP2D6P10635 497 aa11.83□□□□□ -0.52
FOXCUT-201ENST00000628509 TOP1P11387 765 aaKnown RBP11.83□□□□□ -0.52
FOXCUT-201ENST00000628509 RASA1P20936 1047 aa11.83□□□□□ -0.52
FOXCUT-201ENST00000628509 NF2P35240 595 aa11.83□□□□□ -0.52
FOXCUT-201ENST00000628509 SLC4A3P48751 1232 aa11.83□□□□□ -0.52
FOXCUT-201ENST00000628509 ANTXR2P58335 489 aa11.83□□□□□ -0.52
FOXCUT-201ENST00000628509 GABPAQ06546 454 aa11.83□□□□□ -0.52
FOXCUT-201ENST00000628509 TRIM29Q14134 588 aa11.83□□□□□ -0.52
FOXCUT-201ENST00000628509 RTN1Q16799 776 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms