RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 ELP3Q9H9T3 547 aa22.34■■□□□ 1.17
MECP2-216ENST00000627864 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.34■■□□□ 1.17
MECP2-216ENST00000627864 UNCXA6NJT0 531 aa22.33■■□□□ 1.17
MECP2-216ENST00000627864 MPHOSPH10O00566 681 aaKnown RBP22.33■■□□□ 1.17
MECP2-216ENST00000627864 SLC27A2O14975 620 aa22.33■■□□□ 1.17
MECP2-216ENST00000627864 EIF5BO60841 1220 aaKnown RBP22.33■■□□□ 1.17
MECP2-216ENST00000627864 SEC24BO95487 1268 aa22.33■■□□□ 1.17
MECP2-216ENST00000627864 HSPA6P17066 643 aa22.33■■□□□ 1.17
MECP2-216ENST00000627864 JAG1P78504 1218 aa22.33■■□□□ 1.17
MECP2-216ENST00000627864 HTRA3P83110 453 aa22.33■■□□□ 1.17
MECP2-216ENST00000627864 ABCB5Q2M3G0 1257 aa22.33■■□□□ 1.17
MECP2-216ENST00000627864 SHROOM1Q2M3G4 852 aaPredicted RBP22.33■■□□□ 1.17
MECP2-216ENST00000627864 RRP12Q5JTH9 1297 aaKnown RBP22.33■■□□□ 1.17
MECP2-216ENST00000627864 NOL9Q5SY16 702 aaKnown RBP22.33■■□□□ 1.17
MECP2-216ENST00000627864 CREB3L3Q68CJ9 461 aa22.33■■□□□ 1.17
MECP2-216ENST00000627864 CCDC17Q96LX7 622 aa22.33■■□□□ 1.17
MECP2-216ENST00000627864 RNF41Q9H4P4 317 aaPredicted RBP22.33■■□□□ 1.17
MECP2-216ENST00000627864 CABP5Q9NP86 173 aa22.33■■□□□ 1.17
MECP2-216ENST00000627864 PICK1Q9NRD5 415 aa22.33■■□□□ 1.17
MECP2-216ENST00000627864 SNCAIPQ9Y6H5 919 aa22.33■■□□□ 1.17
MECP2-216ENST00000627864 MYH4Q9Y623 1939 aa22.32■■□□□ 1.16
MECP2-216ENST00000627864 AKR1B1P15121 316 aa22.32■■□□□ 1.16
MECP2-216ENST00000627864 ZNF157P51786 506 aaPredicted RBP22.32■■□□□ 1.16
MECP2-216ENST00000627864 RGMBQ6NW40 437 aa22.32■■□□□ 1.16
MECP2-216ENST00000627864 PAXIP1Q6ZW49 1069 aaPredicted RBP22.32■■□□□ 1.16
MECP2-216ENST00000627864 STAG1Q8WVM7 1258 aa22.32■■□□□ 1.16
MECP2-216ENST00000627864 USP26Q9BXU7 913 aa22.32■■□□□ 1.16
MECP2-216ENST00000627864 GREB1LQ9C091 1923 aaPredicted RBP22.31■■□□□ 1.16
MECP2-216ENST00000627864 ORC4O43929 436 aa22.31■■□□□ 1.16
MECP2-216ENST00000627864 GH2P01242 217 aa22.31■■□□□ 1.16
MECP2-216ENST00000627864 FGRP09769 529 aa22.31■■□□□ 1.16
MECP2-216ENST00000627864 DEFB115Q30KQ5 88 aa22.31■■□□□ 1.16
MECP2-216ENST00000627864 RNF20Q5VTR2 975 aa22.31■■□□□ 1.16
MECP2-216ENST00000627864 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.31■■□□□ 1.16
MECP2-216ENST00000627864 ZBTB21Q9ULJ3 1066 aa22.31■■□□□ 1.16
MECP2-216ENST00000627864 TAF6LQ9Y6J9 622 aa22.31■■□□□ 1.16
MECP2-216ENST00000627864 EPB41L2O43491 1005 aaKnown RBP22.3■■□□□ 1.16
MECP2-216ENST00000627864 RANBP6O60518 1105 aaKnown RBP22.3■■□□□ 1.16
MECP2-216ENST00000627864 ASNSP08243 561 aa22.3■■□□□ 1.16
MECP2-216ENST00000627864 PCP11498 1178 aaKnown RBP22.3■■□□□ 1.16
MECP2-216ENST00000627864 FAM47AQ5JRC9 791 aa22.3■■□□□ 1.16
MECP2-216ENST00000627864 HHIPL1Q96JK4 782 aa22.3■■□□□ 1.16
MECP2-216ENST00000627864 GINM1Q9NU53 330 aa22.3■■□□□ 1.16
MECP2-216ENST00000627864 NEDD4P46934 1319 aa22.3■■□□□ 1.16
MECP2-216ENST00000627864 E7EWF7 191 aa22.29■■□□□ 1.16
MECP2-216ENST00000627864 PTPRAP18433 802 aa22.29■■□□□ 1.16
MECP2-216ENST00000627864 TFAP4Q01664 338 aa22.29■■□□□ 1.16
MECP2-216ENST00000627864 RAB3GAP1Q15042 981 aa22.29■■□□□ 1.16
MECP2-216ENST00000627864 CCDC84Q86UT8 332 aaPredicted RBP22.29■■□□□ 1.16
MECP2-216ENST00000627864 ERO1BQ86YB8 467 aa22.29■■□□□ 1.16
MECP2-216ENST00000627864 CNKSR2Q8WXI2 1034 aa22.29■■□□□ 1.16
MECP2-216ENST00000627864 PTPRFP10586 1907 aa22.29■■□□□ 1.16
MECP2-216ENST00000627864 RASSF10A6NK89 507 aa22.28■■□□□ 1.16
MECP2-216ENST00000627864 TSPY3P0CV98 308 aa22.28■■□□□ 1.16
MECP2-216ENST00000627864 TSPY8P0CW00 308 aa22.28■■□□□ 1.16
MECP2-216ENST00000627864 HSPA4P34932 840 aa22.28■■□□□ 1.16
MECP2-216ENST00000627864 GRM1Q13255 1194 aa22.28■■□□□ 1.16
MECP2-216ENST00000627864 SEPT2Q15019 361 aa22.28■■□□□ 1.16
MECP2-216ENST00000627864 TMEM179Q6ZVK1 233 aa22.28■■□□□ 1.16
MECP2-216ENST00000627864 OPTNQ96CV9 577 aa22.28■■□□□ 1.16
MECP2-216ENST00000627864 OTUD5Q96G74 571 aa22.28■■□□□ 1.16
MECP2-216ENST00000627864 CNNM2Q9H8M5 875 aa22.28■■□□□ 1.16
MECP2-216ENST00000627864 SPDYE5A6NIY4 337 aa22.27■■□□□ 1.16
MECP2-216ENST00000627864 TSPY2A6NKD2 308 aa22.27■■□□□ 1.16
MECP2-216ENST00000627864 USP17L5A8MUK1 530 aa22.27■■□□□ 1.16
MECP2-216ENST00000627864 B4E1Z4 1266 aa22.27■■□□□ 1.16
MECP2-216ENST00000627864 ZKSCAN1P17029 563 aaPredicted RBP22.27■■□□□ 1.16
MECP2-216ENST00000627864 MCCP23508 829 aa22.27■■□□□ 1.16
MECP2-216ENST00000627864 GUCY1A2P33402 732 aa22.27■■□□□ 1.16
MECP2-216ENST00000627864 TRDNQ13061 729 aa22.27■■□□□ 1.16
MECP2-216ENST00000627864 CYP4F22Q6NT55 531 aa22.27■■□□□ 1.16
MECP2-216ENST00000627864 STOX1Q6ZVD7 989 aa22.27■■□□□ 1.16
MECP2-216ENST00000627864 RASAL3Q86YV0 1011 aa22.27■■□□□ 1.16
MECP2-216ENST00000627864 WNK4Q96J92 1243 aa22.27■■□□□ 1.16
MECP2-216ENST00000627864 KRT23Q9C075 422 aa22.27■■□□□ 1.16
MECP2-216ENST00000627864 ZHX2Q9Y6X8 837 aa22.27■■□□□ 1.16
MECP2-216ENST00000627864 PPATQ06203 517 aa22.26■■□□□ 1.15
MECP2-216ENST00000627864 MKRN3Q13064 507 aaKnown RBP22.26■■□□□ 1.15
MECP2-216ENST00000627864 RASEFQ8IZ41 740 aa22.26■■□□□ 1.15
MECP2-216ENST00000627864 NEDD1Q8NHV4 660 aa22.26■■□□□ 1.15
MECP2-216ENST00000627864 NKX2-3Q8TAU0 364 aa22.26■■□□□ 1.15
MECP2-216ENST00000627864 ESR2Q92731 530 aa22.26■■□□□ 1.15
MECP2-216ENST00000627864 CCDC102AQ96A19 550 aa22.26■■□□□ 1.15
MECP2-216ENST00000627864 KDM4AO75164 1064 aa22.25■■□□□ 1.15
MECP2-216ENST00000627864 SLC10A3P09131 477 aa22.25■■□□□ 1.15
MECP2-216ENST00000627864 GJA5P36382 358 aa22.25■■□□□ 1.15
MECP2-216ENST00000627864 SPRYD7Q5W111 196 aa22.25■■□□□ 1.15
MECP2-216ENST00000627864 RALYLQ86SE5 291 aaKnown RBP22.25■■□□□ 1.15
MECP2-216ENST00000627864 CLEC10AQ8IUN9 316 aa22.25■■□□□ 1.15
MECP2-216ENST00000627864 NCOA7Q8NI08 942 aa22.25■■□□□ 1.15
MECP2-216ENST00000627864 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.25■■□□□ 1.15
MECP2-216ENST00000627864 AS3MTQ9HBK9 375 aa22.25■■□□□ 1.15
MECP2-216ENST00000627864 PPIL2Q13356 520 aa22.24■■□□□ 1.15
MECP2-216ENST00000627864 KCNB2Q92953 911 aa22.24■■□□□ 1.15
MECP2-216ENST00000627864 CAPNS2Q96L46 248 aa22.24■■□□□ 1.15
MECP2-216ENST00000627864 KANSL2Q9H9L4 492 aa22.24■■□□□ 1.15
MECP2-216ENST00000627864 SNX14Q9Y5W7 946 aa22.24■■□□□ 1.15
MECP2-216ENST00000627864 FAM155AB1AL88 458 aaPredicted RBP22.23■■□□□ 1.15
MECP2-216ENST00000627864 ECE1P42892 770 aa22.23■■□□□ 1.15
MECP2-216ENST00000627864 ATP2B2Q01814 1243 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms