RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 SNAP23O00161 211 aa21.94■■□□□ 1.1
PTBP1-220ENST00000627714 FOXN1O15353 648 aa21.94■■□□□ 1.1
PTBP1-220ENST00000627714 PCP11498 1178 aaKnown RBP21.94■■□□□ 1.1
PTBP1-220ENST00000627714 CYP7A1P22680 504 aa21.94■■□□□ 1.1
PTBP1-220ENST00000627714 ERCC5P28715 1186 aaPredicted RBP21.94■■□□□ 1.1
PTBP1-220ENST00000627714 SEC23AQ15436 765 aa21.94■■□□□ 1.1
PTBP1-220ENST00000627714 SPATA20Q8TB22 786 aa21.94■■□□□ 1.1
PTBP1-220ENST00000627714 NUP133Q8WUM0 1156 aa21.94■■□□□ 1.1
PTBP1-220ENST00000627714 GNL3LQ9NVN8 582 aaKnown RBP21.94■■□□□ 1.1
PTBP1-220ENST00000627714 NFE2L3Q9Y4A8 694 aa21.94■■□□□ 1.1
PTBP1-220ENST00000627714 MYH6P13533 1939 aa21.94■■□□□ 1.1
PTBP1-220ENST00000627714 CAMTA2O94983 1202 aa21.94■■□□□ 1.1
PTBP1-220ENST00000627714 CHRNDQ07001 517 aa21.94■■□□□ 1.1
PTBP1-220ENST00000627714 SPECC1Q5M775 1068 aa21.94■■□□□ 1.1
PTBP1-220ENST00000627714 FBXO38Q6PIJ6 1188 aa21.94■■□□□ 1.1
PTBP1-220ENST00000627714 MIGA1Q8NAN2 632 aa21.94■■□□□ 1.1
PTBP1-220ENST00000627714 CDCA7Q9BWT1 371 aaPredicted RBP21.94■■□□□ 1.1
PTBP1-220ENST00000627714 ZNF804BA4D1E1 1349 aa21.94■■□□□ 1.1
PTBP1-220ENST00000627714 TNKSO95271 1327 aa21.94■■□□□ 1.1
PTBP1-220ENST00000627714 MAGEB6P1A0A0J9YX57 407 aa21.93■■□□□ 1.1
PTBP1-220ENST00000627714 TMEM232C9JQI7 657 aa21.93■■□□□ 1.1
PTBP1-220ENST00000627714 ACTN4O43707 911 aaKnown RBP21.93■■□□□ 1.1
PTBP1-220ENST00000627714 STX10O60499 249 aa21.93■■□□□ 1.1
PTBP1-220ENST00000627714 NTSR2O95665 410 aa21.93■■□□□ 1.1
PTBP1-220ENST00000627714 NR5A1Q13285 461 aa21.93■■□□□ 1.1
PTBP1-220ENST00000627714 SPECC1LQ69YQ0 1117 aa21.93■■□□□ 1.1
PTBP1-220ENST00000627714 KRT222Q8N1A0 295 aa21.93■■□□□ 1.1
PTBP1-220ENST00000627714 INTS13Q9NVM9 706 aa21.93■■□□□ 1.1
PTBP1-220ENST00000627714 AATFQ9NY61 560 aaKnown RBP eCLIP21.93■■□□□ 1.15e-7■■■■□ 20.4
PTBP1-220ENST00000627714 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.93■■□□□ 1.1
PTBP1-220ENST00000627714 V9GYY5 206 aaPredicted RBP21.93■■□□□ 1.1
PTBP1-220ENST00000627714 CDK11BP21127 795 aaKnown RBP21.92■■□□□ 1.1
PTBP1-220ENST00000627714 CRKLP46109 303 aaKnown RBP21.92■■□□□ 1.1
PTBP1-220ENST00000627714 GRIN1Q05586 938 aa21.92■■□□□ 1.1
PTBP1-220ENST00000627714 TMEM139Q8IV31 216 aa21.92■■□□□ 1.1
PTBP1-220ENST00000627714 RBM28Q9NW13 759 aaKnown RBP21.92■■□□□ 1.1
PTBP1-220ENST00000627714 DNAI1Q9UI46 699 aa21.92■■□□□ 1.1
PTBP1-220ENST00000627714 TRIM75PA6NK02 468 aa21.92■■□□□ 1.1
PTBP1-220ENST00000627714 PLCD1P51178 756 aa21.92■■□□□ 1.1
PTBP1-220ENST00000627714 TRIM65Q6PJ69 517 aa21.92■■□□□ 1.1
PTBP1-220ENST00000627714 REXO1L1PQ8IX06 675 aa21.92■■□□□ 1.1
PTBP1-220ENST00000627714 KIF20AO95235 890 aa21.91■■□□□ 1.1
PTBP1-220ENST00000627714 PRR29P0C7W0 189 aa21.91■■□□□ 1.1
PTBP1-220ENST00000627714 CALM1P0DP23 149 aa21.91■■□□□ 1.1
PTBP1-220ENST00000627714 CALM2P0DP24 149 aa21.91■■□□□ 1.1
PTBP1-220ENST00000627714 CALM3P0DP25 149 aa21.91■■□□□ 1.1
PTBP1-220ENST00000627714 CCDC82Q8N4S0 544 aa21.91■■□□□ 1.1
PTBP1-220ENST00000627714 BAG1Q99933 345 aaPredicted RBP21.91■■□□□ 1.1
PTBP1-220ENST00000627714 CABP5Q9NP86 173 aa21.91■■□□□ 1.1
PTBP1-220ENST00000627714 DUOX1Q9NRD9 1551 aa21.91■■□□□ 1.1
PTBP1-220ENST00000627714 PRPF3O43395 683 aaKnown RBP21.91■■□□□ 1.1
PTBP1-220ENST00000627714 H2AFXP16104 143 aaPredicted RBP21.91■■□□□ 1.1
PTBP1-220ENST00000627714 KRT2P35908 639 aa21.91■■□□□ 1.1
PTBP1-220ENST00000627714 CSRNP2Q9H175 543 aa21.91■■□□□ 1.1
PTBP1-220ENST00000627714 FAM53CQ9NYF3 392 aa21.91■■□□□ 1.1
PTBP1-220ENST00000627714 FMR1Q06787 632 aaKnown RBP eCLIP21.9■■□□□ 1.12e-7■■□□□ 12.6
PTBP1-220ENST00000627714 CATIPQ7Z7H3 387 aa21.9■■□□□ 1.1
PTBP1-220ENST00000627714 FERMT2Q96AC1 680 aa21.9■■□□□ 1.1
PTBP1-220ENST00000627714 ZSCAN10Q96SZ4 725 aaPredicted RBP21.9■■□□□ 1.1
PTBP1-220ENST00000627714 PHF20Q9BVI0 1012 aa21.9■■□□□ 1.1
PTBP1-220ENST00000627714 BRIP1Q9BX63 1249 aa21.9■■□□□ 1.1
PTBP1-220ENST00000627714 NIP7Q9Y221 180 aaKnown RBP eCLIP21.9■■□□□ 1.1
PTBP1-220ENST00000627714 PPP2R2CQ9Y2T4 447 aa21.9■■□□□ 1.1
PTBP1-220ENST00000627714 MINDY4BA8MYZ0 360 aa21.9■■□□□ 1.1
PTBP1-220ENST00000627714 OXER1Q8TDS5 423 aa21.9■■□□□ 1.1
PTBP1-220ENST00000627714 BRMS1Q9HCU9 246 aa21.9■■□□□ 1.1
PTBP1-220ENST00000627714 ATP6V1AP38606 617 aa21.89■■□□□ 1.09
PTBP1-220ENST00000627714 UBE4AQ14139 1066 aa21.89■■□□□ 1.09
PTBP1-220ENST00000627714 CMTR1Q8N1G2 835 aaKnown RBP21.89■■□□□ 1.09
PTBP1-220ENST00000627714 RAI14Q9P0K7 980 aa21.89■■□□□ 1.09
PTBP1-220ENST00000627714 ZNF652Q9Y2D9 606 aa21.89■■□□□ 1.09
PTBP1-220ENST00000627714 TPM1P09493 284 aa21.88■■□□□ 1.09
PTBP1-220ENST00000627714 ERCC6LQ2NKX8 1250 aa21.88■■□□□ 1.09
PTBP1-220ENST00000627714 IQCA1Q86XH1 822 aa21.88■■□□□ 1.09
PTBP1-220ENST00000627714 SDR42E1Q8WUS8 393 aa21.88■■□□□ 1.09
PTBP1-220ENST00000627714 RIOK1Q9BRS2 568 aaKnown RBP21.88■■□□□ 1.09
PTBP1-220ENST00000627714 DLEC1Q9Y238 1755 aa21.88■■□□□ 1.09
PTBP1-220ENST00000627714 SLFN14P0C7P3 912 aa21.88■■□□□ 1.09
PTBP1-220ENST00000627714 PKN1Q16512 942 aa21.88■■□□□ 1.09
PTBP1-220ENST00000627714 IFIT1BQ5T764 474 aaKnown RBP21.88■■□□□ 1.09
PTBP1-220ENST00000627714 ADGRA1Q86SQ6 560 aa21.88■■□□□ 1.09
PTBP1-220ENST00000627714 ENAHQ8N8S7 591 aaPredicted RBP21.88■■□□□ 1.09
PTBP1-220ENST00000627714 TC2NQ8N9U0 490 aa21.88■■□□□ 1.09
PTBP1-220ENST00000627714 ABCF2Q9UG63 623 aa21.88■■□□□ 1.09
PTBP1-220ENST00000627714 COL16A1Q07092 1604 aaPredicted RBP21.87■■□□□ 1.09
PTBP1-220ENST00000627714 DDAH1O94760 285 aa21.87■■□□□ 1.09
PTBP1-220ENST00000627714 FGRP09769 529 aa21.87■■□□□ 1.09
PTBP1-220ENST00000627714 FUT2Q10981 343 aa21.87■■□□□ 1.09
PTBP1-220ENST00000627714 PDILTQ8N807 584 aa21.87■■□□□ 1.09
PTBP1-220ENST00000627714 MNS1Q8NEH6 495 aa21.87■■□□□ 1.09
PTBP1-220ENST00000627714 CACNA1SQ13698 1873 aa21.87■■□□□ 1.09
PTBP1-220ENST00000627714 A0A1B0GUL6 1792 aa21.87■■□□□ 1.09
PTBP1-220ENST00000627714 LOC102724428A0A0B4J2F2 783 aa21.87■■□□□ 1.09
PTBP1-220ENST00000627714 A0A1B0GTH6 734 aa21.87■■□□□ 1.09
PTBP1-220ENST00000627714 VWA3AA6NCI4 1184 aa21.87■■□□□ 1.09
PTBP1-220ENST00000627714 SIK1P57059 783 aa21.87■■□□□ 1.09
PTBP1-220ENST00000627714 NR1I3Q14994 352 aa21.87■■□□□ 1.09
PTBP1-220ENST00000627714 UBXN4Q92575 508 aa21.87■■□□□ 1.09
PTBP1-220ENST00000627714 ARGLU1Q9NWB6 273 aaPredicted RBP21.87■■□□□ 1.09
PTBP1-220ENST00000627714 BMS1Q14692 1282 aaKnown RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms