RNA–Protein interactions for RNA: ENST00000626299.2

SOX2-OT-238, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 622 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-238ENST00000626299 AFG3L2Q9Y4W6 797 aa16.28■□□□□ 0.2
SOX2-OT-238ENST00000626299 PATL2C9JE40 543 aaKnown RBP16.27■□□□□ 0.2
SOX2-OT-238ENST00000626299 LBX1P52954 281 aa16.27■□□□□ 0.2
SOX2-OT-238ENST00000626299 ARPP21Q9UBL0 812 aaPredicted RBP16.27■□□□□ 0.2
SOX2-OT-238ENST00000626299 LAMB1P07942 1786 aa16.27■□□□□ 0.2
SOX2-OT-238ENST00000626299 DOCK1Q14185 1865 aa16.27■□□□□ 0.19
SOX2-OT-238ENST00000626299 MYH1P12882 1939 aa16.26■□□□□ 0.19
SOX2-OT-238ENST00000626299 CXCL11O14625 94 aa16.26■□□□□ 0.19
SOX2-OT-238ENST00000626299 APPP05067 770 aa16.26■□□□□ 0.19
SOX2-OT-238ENST00000626299 CETPP11597 493 aa16.26■□□□□ 0.19
SOX2-OT-238ENST00000626299 MOGSQ13724 837 aa16.26■□□□□ 0.19
SOX2-OT-238ENST00000626299 MCMDC2Q4G0Z9 681 aa16.26■□□□□ 0.19
SOX2-OT-238ENST00000626299 SBK1Q52WX2 424 aa16.26■□□□□ 0.19
SOX2-OT-238ENST00000626299 ZNF589Q86UQ0 364 aaPredicted RBP16.26■□□□□ 0.19
SOX2-OT-238ENST00000626299 IFNL3Q8IZI9 196 aa16.26■□□□□ 0.19
SOX2-OT-238ENST00000626299 ZBTB21Q9ULJ3 1066 aa16.26■□□□□ 0.19
SOX2-OT-238ENST00000626299 TRIM75PA6NK02 468 aa16.25■□□□□ 0.19
SOX2-OT-238ENST00000626299 USP17L5A8MUK1 530 aa16.25■□□□□ 0.19
SOX2-OT-238ENST00000626299 BTBD19C9JJ37 291 aa16.25■□□□□ 0.19
SOX2-OT-238ENST00000626299 TBC1D8O95759 1140 aa16.25■□□□□ 0.19
SOX2-OT-238ENST00000626299 GH2P01242 217 aa16.25■□□□□ 0.19
SOX2-OT-238ENST00000626299 ASNSP08243 561 aa16.25■□□□□ 0.19
SOX2-OT-238ENST00000626299 TDO2P48775 406 aa16.25■□□□□ 0.19
SOX2-OT-238ENST00000626299 CERKLQ49MI3 558 aaPredicted RBP16.25■□□□□ 0.19
SOX2-OT-238ENST00000626299 VPS53Q5VIR6 699 aa16.25■□□□□ 0.19
SOX2-OT-238ENST00000626299 C16orf86Q6ZW13 317 aa16.25■□□□□ 0.19
SOX2-OT-238ENST00000626299 AMOTL1Q8IY63 956 aa16.25■□□□□ 0.19
SOX2-OT-238ENST00000626299 FAM43AQ8N2R8 423 aa16.25■□□□□ 0.19
SOX2-OT-238ENST00000626299 R3HDMLQ9H3Y0 253 aa16.25■□□□□ 0.19
SOX2-OT-238ENST00000626299 A0A0G2JLL6 359 aaPredicted RBP16.24■□□□□ 0.19
SOX2-OT-238ENST00000626299 ALDH1A1P00352 501 aa16.24■□□□□ 0.19
SOX2-OT-238ENST00000626299 CDK8P49336 464 aa16.24■□□□□ 0.19
SOX2-OT-238ENST00000626299 PRRT2Q7Z6L0 340 aaPredicted RBP16.24■□□□□ 0.19
SOX2-OT-238ENST00000626299 CFHR5Q9BXR6 569 aa16.24■□□□□ 0.19
SOX2-OT-238ENST00000626299 GINM1Q9NU53 330 aa16.24■□□□□ 0.19
SOX2-OT-238ENST00000626299 SWAP70Q9UH65 585 aa16.24■□□□□ 0.19
SOX2-OT-238ENST00000626299 TAOK2Q9UL54 1235 aa16.24■□□□□ 0.19
SOX2-OT-238ENST00000626299 ROBO3Q96MS0 1386 aa16.24■□□□□ 0.19
SOX2-OT-238ENST00000626299 CCDC171Q6TFL3 1326 aa16.23■□□□□ 0.19
SOX2-OT-238ENST00000626299 MINDY4BA8MYZ0 360 aa16.23■□□□□ 0.19
SOX2-OT-238ENST00000626299 SPP2Q13103 211 aa16.23■□□□□ 0.19
SOX2-OT-238ENST00000626299 ABCB5Q2M3G0 1257 aa16.23■□□□□ 0.19
SOX2-OT-238ENST00000626299 ERICH6BQ5W0A0 696 aa16.23■□□□□ 0.19
SOX2-OT-238ENST00000626299 CWC27Q6UX04 472 aaKnown RBP16.23■□□□□ 0.19
SOX2-OT-238ENST00000626299 ZNF280CQ8ND82 737 aa16.23■□□□□ 0.19
SOX2-OT-238ENST00000626299 TBC1D2Q9BYX2 928 aa16.23■□□□□ 0.19
SOX2-OT-238ENST00000626299 NACAP1Q9BZK3 213 aa16.23■□□□□ 0.19
SOX2-OT-238ENST00000626299 NAPBQ9H115 298 aa16.23■□□□□ 0.19
SOX2-OT-238ENST00000626299 DIAPH3Q9NSV4 1193 aa16.23■□□□□ 0.19
SOX2-OT-238ENST00000626299 HIP1O00291 1037 aa16.22■□□□□ 0.19
SOX2-OT-238ENST00000626299 GUCY1A2P33402 732 aa16.22■□□□□ 0.19
SOX2-OT-238ENST00000626299 CRHR2Q13324 411 aa16.22■□□□□ 0.19
SOX2-OT-238ENST00000626299 OTUD7BQ6GQQ9 843 aa16.22■□□□□ 0.19
SOX2-OT-238ENST00000626299 GPAT2Q6NUI2 795 aa16.22■□□□□ 0.19
SOX2-OT-238ENST00000626299 WDR18Q9BV38 432 aa16.22■□□□□ 0.19
SOX2-OT-238ENST00000626299 IL25Q9H293 177 aa16.22■□□□□ 0.19
SOX2-OT-238ENST00000626299 AS3MTQ9HBK9 375 aa16.22■□□□□ 0.19
SOX2-OT-238ENST00000626299 PRDM10Q9NQV6 1147 aa16.22■□□□□ 0.19
SOX2-OT-238ENST00000626299 HSPD1P10809 573 aaKnown RBP16.21■□□□□ 0.19
SOX2-OT-238ENST00000626299 AKR1B1P15121 316 aa16.21■□□□□ 0.19
SOX2-OT-238ENST00000626299 DGKZQ13574 1117 aa16.21■□□□□ 0.19
SOX2-OT-238ENST00000626299 MTMR2Q13614 643 aa16.21■□□□□ 0.19
SOX2-OT-238ENST00000626299 SEPT2Q15019 361 aa16.21■□□□□ 0.19
SOX2-OT-238ENST00000626299 RAB3GAP1Q15042 981 aa16.21■□□□□ 0.19
SOX2-OT-238ENST00000626299 COL13A1Q5TAT6 717 aaPredicted RBP16.21■□□□□ 0.19
SOX2-OT-238ENST00000626299 ANKRD23Q86SG2 305 aa16.21■□□□□ 0.19
SOX2-OT-238ENST00000626299 STK11IPQ8N1F8 1099 aa16.21■□□□□ 0.19
SOX2-OT-238ENST00000626299 PPP4R2Q9NY27 417 aa16.21■□□□□ 0.19
SOX2-OT-238ENST00000626299 PHIPQ8WWQ0 1821 aa16.21■□□□□ 0.19
SOX2-OT-238ENST00000626299 BAZ2AQ9UIF9 1905 aaKnown RBP16.2■□□□□ 0.18
SOX2-OT-238ENST00000626299 MPHOSPH10O00566 681 aaKnown RBP16.2■□□□□ 0.18
SOX2-OT-238ENST00000626299 HMGCS2P54868 508 aa16.2■□□□□ 0.18
SOX2-OT-238ENST00000626299 PPARAQ07869 468 aa16.2■□□□□ 0.18
SOX2-OT-238ENST00000626299 TAF1CQ15572 869 aaPredicted RBP16.2■□□□□ 0.18
SOX2-OT-238ENST00000626299 ALX1Q15699 326 aa16.2■□□□□ 0.18
SOX2-OT-238ENST00000626299 SH3D19Q5HYK7 790 aa16.2■□□□□ 0.18
SOX2-OT-238ENST00000626299 GADL1Q6ZQY3 521 aa16.2■□□□□ 0.18
SOX2-OT-238ENST00000626299 FASTKD5Q7L8L6 764 aaKnown RBP16.2■□□□□ 0.18
SOX2-OT-238ENST00000626299 ZCCHC17Q9NP64 241 aaKnown RBP16.2■□□□□ 0.18
SOX2-OT-238ENST00000626299 CABP5Q9NP86 173 aa16.2■□□□□ 0.18
SOX2-OT-238ENST00000626299 ATAD5Q96QE3 1844 aa16.19■□□□□ 0.18
SOX2-OT-238ENST00000626299 PDHXO00330 501 aa16.19■□□□□ 0.18
SOX2-OT-238ENST00000626299 FGAP02671 866 aa16.19■□□□□ 0.18
SOX2-OT-238ENST00000626299 RASA1P20936 1047 aa16.19■□□□□ 0.18
SOX2-OT-238ENST00000626299 CHMLP26374 656 aa16.19■□□□□ 0.18
SOX2-OT-238ENST00000626299 BACE1P56817 501 aa16.19■□□□□ 0.18
SOX2-OT-238ENST00000626299 TREML2Q5T2D2 321 aa16.19■□□□□ 0.18
SOX2-OT-238ENST00000626299 TMEM179Q6ZVK1 233 aa16.19■□□□□ 0.18
SOX2-OT-238ENST00000626299 ZMYM6O95789 1325 aa16.19■□□□□ 0.18
SOX2-OT-238ENST00000626299 USP17L10C9JJH3 530 aa16.18■□□□□ 0.18
SOX2-OT-238ENST00000626299 GPR25O00155 361 aa16.18■□□□□ 0.18
SOX2-OT-238ENST00000626299 PRDM1O75626 825 aa16.18■□□□□ 0.18
SOX2-OT-238ENST00000626299 MFAP1P55081 439 aaKnown RBP16.18■□□□□ 0.18
SOX2-OT-238ENST00000626299 NOM1Q5C9Z4 860 aaKnown RBP16.18■□□□□ 0.18
SOX2-OT-238ENST00000626299 CLEC10AQ8IUN9 316 aa16.18■□□□□ 0.18
SOX2-OT-238ENST00000626299 PROCA1Q8NCQ7 364 aaPredicted RBP16.18■□□□□ 0.18
SOX2-OT-238ENST00000626299 ACER1Q8TDN7 264 aa16.18■□□□□ 0.18
SOX2-OT-238ENST00000626299 ZNF296Q8WUU4 475 aaPredicted RBP16.18■□□□□ 0.18
SOX2-OT-238ENST00000626299 CCDC17Q96LX7 622 aa16.18■□□□□ 0.18
SOX2-OT-238ENST00000626299 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms