RNA–Protein interactions for RNA: ENST00000624811.1

USH1C-211, Transcript of USH1 protein network component harmonin, humanhuman

Gene USH1C, Length 1,194 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-211ENST00000624811 INHAP05111 366 aa16.71■□□□□ 0.27
USH1C-211ENST00000624811 MS4A1P11836 297 aa16.71■□□□□ 0.27
USH1C-211ENST00000624811 MAP3K12Q12852 859 aa16.71■□□□□ 0.27
USH1C-211ENST00000624811 FAM110CQ1W6H9 321 aa16.71■□□□□ 0.27
USH1C-211ENST00000624811 HSP90AB4PQ58FF6 505 aa16.71■□□□□ 0.27
USH1C-211ENST00000624811 SH3D19Q5HYK7 790 aa16.71■□□□□ 0.27
USH1C-211ENST00000624811 COA7Q96BR5 231 aa16.71■□□□□ 0.27
USH1C-211ENST00000624811 WDR18Q9BV38 432 aa16.71■□□□□ 0.27
USH1C-211ENST00000624811 ZBTB21Q9ULJ3 1066 aa16.71■□□□□ 0.27
USH1C-211ENST00000624811 PLXNB2O15031 1838 aa16.7■□□□□ 0.26
USH1C-211ENST00000624811 GJB1P08034 283 aa16.7■□□□□ 0.26
USH1C-211ENST00000624811 GJA8P48165 433 aa16.7■□□□□ 0.26
USH1C-211ENST00000624811 BACE1P56817 501 aa16.7■□□□□ 0.26
USH1C-211ENST00000624811 IRX3P78415 501 aaPredicted RBP16.7■□□□□ 0.26
USH1C-211ENST00000624811 METTL16Q86W50 562 aaKnown RBP16.7■□□□□ 0.26
USH1C-211ENST00000624811 GCC1Q96CN9 775 aa16.7■□□□□ 0.26
USH1C-211ENST00000624811 DNAJC2Q99543 621 aaKnown RBP16.7■□□□□ 0.26
USH1C-211ENST00000624811 DDX60LQ5H9U9 1706 aaKnown RBP16.7■□□□□ 0.26
USH1C-211ENST00000624811 IGSF3O75054 1194 aa16.69■□□□□ 0.26
USH1C-211ENST00000624811 GH2P01242 217 aa16.69■□□□□ 0.26
USH1C-211ENST00000624811 GCLCP48506 637 aaPredicted RBP16.69■□□□□ 0.26
USH1C-211ENST00000624811 ZYXQ15942 572 aaKnown RBP16.69■□□□□ 0.26
USH1C-211ENST00000624811 HABP4Q5JVS0 413 aaKnown RBP16.69■□□□□ 0.26
USH1C-211ENST00000624811 SIRT2Q8IXJ6 389 aa16.69■□□□□ 0.26
USH1C-211ENST00000624811 CLASRPQ8N2M8 674 aaKnown RBP16.69■□□□□ 0.26
USH1C-211ENST00000624811 NKX2-3Q8TAU0 364 aa16.69■□□□□ 0.26
USH1C-211ENST00000624811 DDX19BQ9UMR2 479 aa16.69■□□□□ 0.26
USH1C-211ENST00000624811 MYH8P13535 1937 aa16.68■□□□□ 0.26
USH1C-211ENST00000624811 MAGEB6P1A0A0J9YX57 407 aa16.68■□□□□ 0.26
USH1C-211ENST00000624811 USP17L10C9JJH3 530 aa16.68■□□□□ 0.26
USH1C-211ENST00000624811 H0YGN5 161 aa16.68■□□□□ 0.26
USH1C-211ENST00000624811 GOLIM4O00461 696 aa16.68■□□□□ 0.26
USH1C-211ENST00000624811 HMMRO75330 724 aa16.68■□□□□ 0.26
USH1C-211ENST00000624811 IFIT2P09913 472 aaKnown RBP16.68■□□□□ 0.26
USH1C-211ENST00000624811 IRF5Q13568 498 aa16.68■□□□□ 0.26
USH1C-211ENST00000624811 RPAP2Q8IXW5 612 aaPredicted RBP16.68■□□□□ 0.26
USH1C-211ENST00000624811 U2AF1L4Q8WU68 220 aaKnown RBP16.68■□□□□ 0.26
USH1C-211ENST00000624811 DPF3Q92784 378 aa16.68■□□□□ 0.26
USH1C-211ENST00000624811 KIF1BPQ96EK5 621 aa16.68■□□□□ 0.26
USH1C-211ENST00000624811 EDC3Q96F86 508 aaKnown RBP16.68■□□□□ 0.26
USH1C-211ENST00000624811 P2RX7Q99572 595 aaKnown RBP16.68■□□□□ 0.26
USH1C-211ENST00000624811 ZBTB40Q9NUA8 1239 aa16.68■□□□□ 0.26
USH1C-211ENST00000624811 C19orf81C9J6K1 198 aa16.67■□□□□ 0.26
USH1C-211ENST00000624811 PDE6AP16499 860 aa16.67■□□□□ 0.26
USH1C-211ENST00000624811 SLC9C2Q5TAH2 1124 aa16.67■□□□□ 0.26
USH1C-211ENST00000624811 PXYLP1Q8TE99 480 aa16.67■□□□□ 0.26
USH1C-211ENST00000624811 RIOK1Q9BRS2 568 aaKnown RBP16.67■□□□□ 0.26
USH1C-211ENST00000624811 SERPINB13Q9UIV8 391 aa16.67■□□□□ 0.26
USH1C-211ENST00000624811 RCAN3Q9UKA8 241 aa16.67■□□□□ 0.26
USH1C-211ENST00000624811 MYH7P12883 1935 aa16.66■□□□□ 0.26
USH1C-211ENST00000624811 BAZ2AQ9UIF9 1905 aaKnown RBP16.66■□□□□ 0.26
USH1C-211ENST00000624811 FARP2O94887 1054 aaPredicted RBP16.66■□□□□ 0.26
USH1C-211ENST00000624811 PLCD1P51178 756 aa16.66■□□□□ 0.26
USH1C-211ENST00000624811 HERVK_113P62684 666 aa16.66■□□□□ 0.26
USH1C-211ENST00000624811 EVX2Q03828 476 aa16.66■□□□□ 0.26
USH1C-211ENST00000624811 RAB3GAP1Q15042 981 aa16.66■□□□□ 0.26
USH1C-211ENST00000624811 TTF1Q15361 905 aaPredicted RBP16.66■□□□□ 0.26
USH1C-211ENST00000624811 DEFB118Q96PH6 123 aa16.66■□□□□ 0.26
USH1C-211ENST00000624811 FEZ1Q99689 392 aa16.66■□□□□ 0.26
USH1C-211ENST00000624811 TXNRD2Q9NNW7 524 aa16.66■□□□□ 0.26
USH1C-211ENST00000624811 EMILIN3Q9NT22 766 aa16.66■□□□□ 0.26
USH1C-211ENST00000624811 ZNF532Q9HCE3 1301 aa16.66■□□□□ 0.26
USH1C-211ENST00000624811 SGPL1O95470 568 aa16.65■□□□□ 0.26
USH1C-211ENST00000624811 TFRCP02786 760 aaKnown RBP16.65■□□□□ 0.26
USH1C-211ENST00000624811 POLR3DP05423 398 aaPredicted RBP16.65■□□□□ 0.26
USH1C-211ENST00000624811 HOXA7P31268 230 aaPredicted RBP16.65■□□□□ 0.26
USH1C-211ENST00000624811 SLFNL1Q499Z3 407 aa16.65■□□□□ 0.26
USH1C-211ENST00000624811 CERKLQ49MI3 558 aaPredicted RBP16.65■□□□□ 0.26
USH1C-211ENST00000624811 C20orf194Q5TEA3 1177 aa16.65■□□□□ 0.26
USH1C-211ENST00000624811 TATDN1Q6P1N9 297 aa16.65■□□□□ 0.26
USH1C-211ENST00000624811 USP17L2Q6R6M4 530 aa16.65■□□□□ 0.26
USH1C-211ENST00000624811 TTC6Q86TZ1 520 aa16.65■□□□□ 0.26
USH1C-211ENST00000624811 CERS3Q8IU89 383 aa16.65■□□□□ 0.26
USH1C-211ENST00000624811 PAGR1Q9BTK6 254 aa16.65■□□□□ 0.26
USH1C-211ENST00000624811 GINM1Q9NU53 330 aa16.65■□□□□ 0.26
USH1C-211ENST00000624811 MORF4L1Q9UBU8 362 aa16.65■□□□□ 0.26
USH1C-211ENST00000624811 COLQQ9Y215 455 aaPredicted RBP16.65■□□□□ 0.26
USH1C-211ENST00000624811 CYP2B6P20813 491 aa16.64■□□□□ 0.25
USH1C-211ENST00000624811 TRIM32Q13049 653 aa16.64■□□□□ 0.25
USH1C-211ENST00000624811 ABCB5Q2M3G0 1257 aa16.64■□□□□ 0.25
USH1C-211ENST00000624811 LCORLQ8N3X6 602 aa16.64■□□□□ 0.25
USH1C-211ENST00000624811 GPRC5AQ8NFJ5 357 aa16.64■□□□□ 0.25
USH1C-211ENST00000624811 SDR42E1Q8WUS8 393 aa16.64■□□□□ 0.25
USH1C-211ENST00000624811 CRNKL1Q9BZJ0 848 aaKnown RBP16.64■□□□□ 0.25
USH1C-211ENST00000624811 EHD4Q9H223 541 aa16.64■□□□□ 0.25
USH1C-211ENST00000624811 BOLA2Q9H3K6 86 aa16.64■□□□□ 0.25
USH1C-211ENST00000624811 ALPK3Q96L96 1907 aa16.63■□□□□ 0.25
USH1C-211ENST00000624811 RAB11FIP3O75154 756 aa16.63■□□□□ 0.25
USH1C-211ENST00000624811 CYP2D6P10635 497 aa16.63■□□□□ 0.25
USH1C-211ENST00000624811 SHMT1P34896 483 aa16.63■□□□□ 0.25
USH1C-211ENST00000624811 Q3C1V9 767 aa16.63■□□□□ 0.25
USH1C-211ENST00000624811 UBE2Q1Q7Z7E8 422 aa16.63■□□□□ 0.25
USH1C-211ENST00000624811 ACER1Q8TDN7 264 aa16.63■□□□□ 0.25
USH1C-211ENST00000624811 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.63■□□□□ 0.25
USH1C-211ENST00000624811 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.63■□□□□ 0.25
USH1C-211ENST00000624811 ARMT1Q9H993 441 aa16.63■□□□□ 0.25
USH1C-211ENST00000624811 MCM9Q9NXL9 1143 aa16.63■□□□□ 0.25
USH1C-211ENST00000624811 RBPJLQ9UBG7 517 aa16.63■□□□□ 0.25
USH1C-211ENST00000624811 GJD2Q9UKL4 321 aa16.63■□□□□ 0.25
USH1C-211ENST00000624811 TCRBV5S4A2TA0A5A2 114 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms