RNA–Protein interactions for RNA: ENST00000623989.3

CU633906.2-203, humanhuman

TSL 1 (best)

Gene CU633906.2, Length 767 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CU633906.2-203ENST00000623989 COL13A1Q5TAT6 717 aaPredicted RBP12.32□□□□□ -0.44
CU633906.2-203ENST00000623989 RAPGEF4Q8WZA2 1011 aa12.32□□□□□ -0.44
CU633906.2-203ENST00000623989 SPACA7Q96KW9 195 aa12.32□□□□□ -0.44
CU633906.2-203ENST00000623989 SRA1Q9HD15 236 aaKnown RBP12.32□□□□□ -0.44
CU633906.2-203ENST00000623989 ABI2Q9NYB9 513 aaPredicted RBP12.32□□□□□ -0.44
CU633906.2-203ENST00000623989 TFCP2L1Q9NZI6 479 aa12.32□□□□□ -0.44
CU633906.2-203ENST00000623989 CCNL1Q9UK58 526 aaPredicted RBP12.32□□□□□ -0.44
CU633906.2-203ENST00000623989 NCAPD2Q15021 1401 aa12.31□□□□□ -0.44
CU633906.2-203ENST00000623989 DLL1O00548 723 aa12.31□□□□□ -0.44
CU633906.2-203ENST00000623989 SCNN1AP37088 669 aa12.31□□□□□ -0.44
CU633906.2-203ENST00000623989 ATCAYQ86WG3 371 aa12.31□□□□□ -0.44
CU633906.2-203ENST00000623989 WFDC12Q8WWY7 111 aa12.31□□□□□ -0.44
CU633906.2-203ENST00000623989 TP53INP1Q96A56 240 aa12.31□□□□□ -0.44
CU633906.2-203ENST00000623989 SSBP4Q9BWG4 385 aaPredicted RBP12.31□□□□□ -0.44
CU633906.2-203ENST00000623989 TIMELESSQ9UNS1 1208 aa12.31□□□□□ -0.44
CU633906.2-203ENST00000623989 TMEM88BA6NKF7 163 aa12.3□□□□□ -0.44
CU633906.2-203ENST00000623989 CYP27B1O15528 508 aa12.3□□□□□ -0.44
CU633906.2-203ENST00000623989 POLD1P28340 1107 aa12.3□□□□□ -0.44
CU633906.2-203ENST00000623989 PDE12Q6L8Q7 609 aaKnown RBP12.3□□□□□ -0.44
CU633906.2-203ENST00000623989 CACTIN-AS1Q8N1I8 211 aa12.3□□□□□ -0.44
CU633906.2-203ENST00000623989 C1orf115Q9H7X2 142 aa12.3□□□□□ -0.44
CU633906.2-203ENST00000623989 PCDH11XQ9BZA7 1347 aa12.3□□□□□ -0.44
CU633906.2-203ENST00000623989 PCDH11YQ9BZA8 1340 aa12.3□□□□□ -0.44
CU633906.2-203ENST00000623989 NSD3Q9BZ95 1437 aa12.29□□□□□ -0.44
CU633906.2-203ENST00000623989 ANKRD26Q9UPS8 1709 aa12.29□□□□□ -0.44
CU633906.2-203ENST00000623989 NOS3P29474 1203 aa12.29□□□□□ -0.44
CU633906.2-203ENST00000623989 IREB2P48200 963 aaKnown RBP12.29□□□□□ -0.44
CU633906.2-203ENST00000623989 ATP11AP98196 1134 aa12.29□□□□□ -0.44
CU633906.2-203ENST00000623989 PRSS36Q5K4E3 855 aa12.29□□□□□ -0.44
CU633906.2-203ENST00000623989 COL23A1Q86Y22 540 aaPredicted RBP12.29□□□□□ -0.44
CU633906.2-203ENST00000623989 MAP4K3Q8IVH8 894 aa12.29□□□□□ -0.44
CU633906.2-203ENST00000623989 PKD1L3Q7Z443 1732 aa12.28□□□□□ -0.44
CU633906.2-203ENST00000623989 TAF1LQ8IZX4 1826 aa12.28□□□□□ -0.44
CU633906.2-203ENST00000623989 ZNF438Q7Z4V0 828 aa12.28□□□□□ -0.44
CU633906.2-203ENST00000623989 MUC3BQ9H195 1237 aa12.28□□□□□ -0.44
CU633906.2-203ENST00000623989 WASHC2AQ641Q2 1341 aa12.28□□□□□ -0.44
CU633906.2-203ENST00000623989 C5P01031 1676 aa12.28□□□□□ -0.44
CU633906.2-203ENST00000623989 TOGARAM1Q9Y4F4 1720 aa12.28□□□□□ -0.44
CU633906.2-203ENST00000623989 GOLGB1Q14789 3259 aaKnown RBP12.28□□□□□ -0.44
CU633906.2-203ENST00000623989 ITGB4P16144 1822 aa12.27□□□□□ -0.44
CU633906.2-203ENST00000623989 SMNDC1O75940 238 aaKnown RBP eCLIP12.27□□□□□ -0.45
CU633906.2-203ENST00000623989 KIF4AO95239 1232 aa12.27□□□□□ -0.45
CU633906.2-203ENST00000623989 RPLP1P05386 114 aaKnown RBP12.27□□□□□ -0.45
CU633906.2-203ENST00000623989 EDEM1Q92611 657 aa12.27□□□□□ -0.45
CU633906.2-203ENST00000623989 ELP3Q9H9T3 547 aa12.27□□□□□ -0.45
CU633906.2-203ENST00000623989 TMEM63CQ9P1W3 806 aa12.27□□□□□ -0.45
CU633906.2-203ENST00000623989 PPME1Q9Y570 386 aa12.27□□□□□ -0.45
CU633906.2-203ENST00000623989 MAP2P11137 1827 aaKnown RBP12.27□□□□□ -0.45
CU633906.2-203ENST00000623989 CYP2E1P05181 493 aaPredicted RBP12.26□□□□□ -0.45
CU633906.2-203ENST00000623989 HMGB2P26583 209 aaKnown RBP12.26□□□□□ -0.45
CU633906.2-203ENST00000623989 SSFA2P28290 1259 aa12.26□□□□□ -0.45
CU633906.2-203ENST00000623989 SETDB1Q15047 1291 aa12.26□□□□□ -0.45
CU633906.2-203ENST00000623989 CEP135Q66GS9 1140 aa12.26□□□□□ -0.45
CU633906.2-203ENST00000623989 NLGN2Q8NFZ4 835 aa12.26□□□□□ -0.45
CU633906.2-203ENST00000623989 GTF3C2Q8WUA4 911 aaPredicted RBP12.26□□□□□ -0.45
CU633906.2-203ENST00000623989 MRPL18Q9H0U6 180 aaKnown RBP12.26□□□□□ -0.45
CU633906.2-203ENST00000623989 CLSPNQ9HAW4 1339 aa12.26□□□□□ -0.45
CU633906.2-203ENST00000623989 PALLDQ8WX93 1383 aa12.26□□□□□ -0.45
CU633906.2-203ENST00000623989 PCSK2P16519 638 aa12.25□□□□□ -0.45
CU633906.2-203ENST00000623989 MPSTP25325 297 aa12.25□□□□□ -0.45
CU633906.2-203ENST00000623989 DNM1Q05193 864 aaKnown RBP12.25□□□□□ -0.45
CU633906.2-203ENST00000623989 GPR162Q16538 588 aa12.25□□□□□ -0.45
CU633906.2-203ENST00000623989 NOM1Q5C9Z4 860 aaKnown RBP12.25□□□□□ -0.45
CU633906.2-203ENST00000623989 MPRIPQ6WCQ1 1025 aa12.25□□□□□ -0.45
CU633906.2-203ENST00000623989 NCAPG2Q86XI2 1143 aa12.25□□□□□ -0.45
CU633906.2-203ENST00000623989 LACRTQ9GZZ8 138 aa12.25□□□□□ -0.45
CU633906.2-203ENST00000623989 RASSF4Q9H2L5 321 aa12.25□□□□□ -0.45
CU633906.2-203ENST00000623989 AKTIPQ9H8T0 292 aa12.25□□□□□ -0.45
CU633906.2-203ENST00000623989 POLKQ9UBT6 870 aa12.25□□□□□ -0.45
CU633906.2-203ENST00000623989 PIGBQ92521 554 aa12.24□□□□□ -0.45
CU633906.2-203ENST00000623989 SMARCC1Q92922 1105 aaPredicted RBP12.24□□□□□ -0.45
CU633906.2-203ENST00000623989 MEGF10Q96KG7 1140 aa12.24□□□□□ -0.45
CU633906.2-203ENST00000623989 C4BP0C0L5 1744 aa12.23□□□□□ -0.45
CU633906.2-203ENST00000623989 EIF1AXP47813 144 aaKnown RBP12.23□□□□□ -0.45
CU633906.2-203ENST00000623989 FOXD4L6Q3SYB3 417 aaPredicted RBP12.23□□□□□ -0.45
CU633906.2-203ENST00000623989 FOXD4L3Q6VB84 417 aaPredicted RBP12.23□□□□□ -0.45
CU633906.2-203ENST00000623989 AMIGO3Q86WK7 504 aa12.23□□□□□ -0.45
CU633906.2-203ENST00000623989 FLAD1Q8NFF5 587 aa12.23□□□□□ -0.45
CU633906.2-203ENST00000623989 SPG7Q9UQ90 795 aa12.23□□□□□ -0.45
CU633906.2-203ENST00000623989 SCO2A0A1W2PP80 73 aa12.22□□□□□ -0.45
CU633906.2-203ENST00000623989 PPM1GO15355 546 aaPredicted RBP12.22□□□□□ -0.45
CU633906.2-203ENST00000623989 PDGFAP04085 211 aa12.22□□□□□ -0.45
CU633906.2-203ENST00000623989 YBX3P16989 372 aaKnown RBP eCLIP12.22□□□□□ -0.45
CU633906.2-203ENST00000623989 CDC27P30260 824 aa12.22□□□□□ -0.45
CU633906.2-203ENST00000623989 TTC16Q8NEE8 873 aa12.22□□□□□ -0.45
CU633906.2-203ENST00000623989 PBX4Q9BYU1 374 aa12.22□□□□□ -0.45
CU633906.2-203ENST00000623989 KANSL3Q9P2N6 904 aa12.22□□□□□ -0.45
CU633906.2-203ENST00000623989 UBR3Q6ZT12 1888 aa12.22□□□□□ -0.45
CU633906.2-203ENST00000623989 PLEKHG2Q9H7P9 1386 aa12.21□□□□□ -0.45
CU633906.2-203ENST00000623989 F8W735 103 aaPredicted RBP12.21□□□□□ -0.45
CU633906.2-203ENST00000623989 MZF1P28698 734 aaPredicted RBP12.21□□□□□ -0.45
CU633906.2-203ENST00000623989 CEP120Q8N960 986 aa12.21□□□□□ -0.45
CU633906.2-203ENST00000623989 CD2APQ9Y5K6 639 aa12.21□□□□□ -0.45
CU633906.2-203ENST00000623989 LINC01387J3KSC0 135 aa12.2□□□□□ -0.46
CU633906.2-203ENST00000623989 PHKG2P15735 406 aa12.2□□□□□ -0.46
CU633906.2-203ENST00000623989 MTMR3Q13615 1198 aa12.2□□□□□ -0.46
CU633906.2-203ENST00000623989 EIF4A2Q14240 407 aaKnown RBP12.2□□□□□ -0.46
CU633906.2-203ENST00000623989 C8orf34Q49A92 452 aa12.2□□□□□ -0.46
CU633906.2-203ENST00000623989 XKR5Q6UX68 686 aa12.2□□□□□ -0.46
CU633906.2-203ENST00000623989 TMEM130Q8N3G9 435 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms