RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 GRB10Q13322 594 aa8.55□□□□□ -1.04
CDKL5-204ENST00000623364 CCL14Q16627 93 aa8.55□□□□□ -1.04
CDKL5-204ENST00000623364 PRRT2Q7Z6L0 340 aaPredicted RBP8.55□□□□□ -1.04
CDKL5-204ENST00000623364 RNF135Q8IUD6 432 aa8.55□□□□□ -1.04
CDKL5-204ENST00000623364 CERS5Q8N5B7 392 aa8.55□□□□□ -1.04
CDKL5-204ENST00000623364 LMCD1Q9NZU5 365 aa8.55□□□□□ -1.04
CDKL5-204ENST00000623364 UTYO14607 1347 aa8.54□□□□□ -1.04
CDKL5-204ENST00000623364 ADRB1P08588 477 aa8.54□□□□□ -1.04
CDKL5-204ENST00000623364 CSF2RAP15509 400 aa8.54□□□□□ -1.04
CDKL5-204ENST00000623364 SDHBP21912 280 aa8.54□□□□□ -1.04
CDKL5-204ENST00000623364 MKRN4PQ13434 485 aaPredicted RBP8.54□□□□□ -1.04
CDKL5-204ENST00000623364 RSPO4Q2I0M5 234 aaPredicted RBP8.54□□□□□ -1.04
CDKL5-204ENST00000623364 TMEM67Q5HYA8 995 aa8.54□□□□□ -1.04
CDKL5-204ENST00000623364 KCNG4Q8TDN1 519 aa8.54□□□□□ -1.04
CDKL5-204ENST00000623364 APBA2Q99767 749 aa8.54□□□□□ -1.04
CDKL5-204ENST00000623364 SEC31BQ9NQW1 1179 aa8.54□□□□□ -1.04
CDKL5-204ENST00000623364 BPTFQ12830 3046 aa8.54□□□□□ -1.04
CDKL5-204ENST00000623364 CYSRT1A8MQ03 144 aa8.53□□□□□ -1.04
CDKL5-204ENST00000623364 FGBP02675 491 aa8.53□□□□□ -1.04
CDKL5-204ENST00000623364 CA3P07451 260 aa8.53□□□□□ -1.04
CDKL5-204ENST00000623364 FAAP100Q0VG06 881 aa8.53□□□□□ -1.04
CDKL5-204ENST00000623364 CDCA8Q53HL2 280 aa8.53□□□□□ -1.04
CDKL5-204ENST00000623364 FAM89AQ96GI7 184 aa8.53□□□□□ -1.04
CDKL5-204ENST00000623364 SLC4A7Q9Y6M7 1214 aa8.53□□□□□ -1.04
CDKL5-204ENST00000623364 ZXDAP98168 799 aa8.52□□□□□ -1.05
CDKL5-204ENST00000623364 MIGA2Q7L4E1 593 aa8.52□□□□□ -1.05
CDKL5-204ENST00000623364 ANKRD18AQ8IVF6 992 aa8.52□□□□□ -1.05
CDKL5-204ENST00000623364 TDRD7Q8NHU6 1098 aaKnown RBP8.52□□□□□ -1.05
CDKL5-204ENST00000623364 TOX2Q96NM4 488 aa8.52□□□□□ -1.05
CDKL5-204ENST00000623364 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.52□□□□□ -1.05
CDKL5-204ENST00000623364 AGTPBP1Q9UPW5 1226 aa8.52□□□□□ -1.05
CDKL5-204ENST00000623364 SSUH2Q9Y2M2 353 aa8.52□□□□□ -1.05
CDKL5-204ENST00000623364 ZHX2Q9Y6X8 837 aa8.52□□□□□ -1.05
CDKL5-204ENST00000623364 H3BQ06 376 aaPredicted RBP8.51□□□□□ -1.05
CDKL5-204ENST00000623364 ATP2A2P16615 1042 aaKnown RBP8.51□□□□□ -1.05
CDKL5-204ENST00000623364 CCT4P50991 539 aaKnown RBP8.51□□□□□ -1.05
CDKL5-204ENST00000623364 NOL9Q5SY16 702 aaKnown RBP8.51□□□□□ -1.05
CDKL5-204ENST00000623364 OTOP2Q7RTS6 562 aa8.51□□□□□ -1.05
CDKL5-204ENST00000623364 ANKRD33Q7Z3H0 272 aa8.51□□□□□ -1.05
CDKL5-204ENST00000623364 TXNRD3Q86VQ6 643 aa8.51□□□□□ -1.05
CDKL5-204ENST00000623364 CCAR1Q8IX12 1150 aaKnown RBP8.51□□□□□ -1.05
CDKL5-204ENST00000623364 DZIP1LQ8IYY4 767 aaKnown RBP8.51□□□□□ -1.05
CDKL5-204ENST00000623364 NEK9Q8TD19 979 aa8.51□□□□□ -1.05
CDKL5-204ENST00000623364 ZNF428Q96B54 188 aa8.51□□□□□ -1.05
CDKL5-204ENST00000623364 HINFPQ9BQA5 517 aa8.51□□□□□ -1.05
CDKL5-204ENST00000623364 IL23AQ9NPF7 189 aa8.51□□□□□ -1.05
CDKL5-204ENST00000623364 DMDP11532 3685 aa8.51□□□□□ -1.05
CDKL5-204ENST00000623364 IRS4O14654 1257 aaPredicted RBP8.5□□□□□ -1.05
CDKL5-204ENST00000623364 LPXNO60711 386 aa8.5□□□□□ -1.05
CDKL5-204ENST00000623364 PRR29P0C7W0 189 aa8.5□□□□□ -1.05
CDKL5-204ENST00000623364 MAPK4P31152 587 aa8.5□□□□□ -1.05
CDKL5-204ENST00000623364 FKBP1AP62942 108 aaKnown RBP8.5□□□□□ -1.05
CDKL5-204ENST00000623364 SIGLEC14Q08ET2 396 aa8.5□□□□□ -1.05
CDKL5-204ENST00000623364 COPS6Q7L5N1 327 aa8.5□□□□□ -1.05
CDKL5-204ENST00000623364 USP6NLQ92738 828 aa8.5□□□□□ -1.05
CDKL5-204ENST00000623364 PICK1Q9NRD5 415 aa8.5□□□□□ -1.05
CDKL5-204ENST00000623364 ZNF112Q9UJU3 913 aa8.5□□□□□ -1.05
CDKL5-204ENST00000623364 SERPINA10Q9UK55 444 aa8.5□□□□□ -1.05
CDKL5-204ENST00000623364 TBX21Q9UL17 535 aa8.5□□□□□ -1.05
CDKL5-204ENST00000623364 PHF24Q9UPV7 400 aa8.5□□□□□ -1.05
CDKL5-204ENST00000623364 ASPMQ8IZT6 3477 aa8.49□□□□□ -1.05
CDKL5-204ENST00000623364 LMNAP02545 664 aaKnown RBP8.49□□□□□ -1.05
CDKL5-204ENST00000623364 HSP90B1P14625 803 aaKnown RBP8.49□□□□□ -1.05
CDKL5-204ENST00000623364 LRRC41Q15345 812 aa8.49□□□□□ -1.05
CDKL5-204ENST00000623364 CCDC152Q4G0S7 254 aa8.49□□□□□ -1.05
CDKL5-204ENST00000623364 RTL5Q5HYW3 569 aaPredicted RBP8.49□□□□□ -1.05
CDKL5-204ENST00000623364 LRSAM1Q6UWE0 723 aa8.49□□□□□ -1.05
CDKL5-204ENST00000623364 PRR23BQ6ZRT6 265 aa8.49□□□□□ -1.05
CDKL5-204ENST00000623364 SEMA4AQ9H3S1 761 aa8.49□□□□□ -1.05
CDKL5-204ENST00000623364 TMOD2Q9NZR1 351 aa8.49□□□□□ -1.05
CDKL5-204ENST00000623364 MORF4L1Q9UBU8 362 aa8.49□□□□□ -1.05
CDKL5-204ENST00000623364 LEMD3Q9Y2U8 911 aa8.49□□□□□ -1.05
CDKL5-204ENST00000623364 ZNF462Q96JM2 2506 aa8.49□□□□□ -1.05
CDKL5-204ENST00000623364 MYO18BQ8IUG5 2567 aa8.48□□□□□ -1.05
CDKL5-204ENST00000623364 ATXN1P54253 815 aaKnown RBP8.48□□□□□ -1.05
CDKL5-204ENST00000623364 EIF4G2P78344 907 aaKnown RBP eCLIP8.48□□□□□ -1.05
CDKL5-204ENST00000623364 ATP2B2Q01814 1243 aa8.48□□□□□ -1.05
CDKL5-204ENST00000623364 TAP1Q03518 808 aa8.48□□□□□ -1.05
CDKL5-204ENST00000623364 PABPC4Q13310 644 aaKnown RBP eCLIP8.48□□□□□ -1.05
CDKL5-204ENST00000623364 MORN1Q5T089 497 aa8.48□□□□□ -1.05
CDKL5-204ENST00000623364 FAM83AQ86UY5 434 aa8.48□□□□□ -1.05
CDKL5-204ENST00000623364 CD209Q9NNX6 404 aa8.48□□□□□ -1.05
CDKL5-204ENST00000623364 AFG3L2Q9Y4W6 797 aa8.48□□□□□ -1.05
CDKL5-204ENST00000623364 ZBBXA8MT70 800 aa8.47□□□□□ -1.05
CDKL5-204ENST00000623364 DIAPH1O60610 1272 aaKnown RBP8.47□□□□□ -1.05
CDKL5-204ENST00000623364 TREML2Q5T2D2 321 aa8.47□□□□□ -1.05
CDKL5-204ENST00000623364 ANO1Q5XXA6 986 aa8.47□□□□□ -1.05
CDKL5-204ENST00000623364 GPRC5AQ8NFJ5 357 aa8.47□□□□□ -1.05
CDKL5-204ENST00000623364 RTF1Q92541 710 aaKnown RBP8.47□□□□□ -1.05
CDKL5-204ENST00000623364 EDC3Q96F86 508 aaKnown RBP8.47□□□□□ -1.05
CDKL5-204ENST00000623364 THUMPD2Q9BTF0 503 aaKnown RBP8.47□□□□□ -1.05
CDKL5-204ENST00000623364 CWC22Q9HCG8 908 aaKnown RBP8.47□□□□□ -1.05
CDKL5-204ENST00000623364 MINPP1Q9UNW1 487 aa8.47□□□□□ -1.05
CDKL5-204ENST00000623364 OTOGLQ3ZCN5 2332 aa8.47□□□□□ -1.05
CDKL5-204ENST00000623364 PTPN13Q12923 2485 aa8.46□□□□□ -1.05
CDKL5-204ENST00000623364 TEP1Q99973 2627 aaKnown RBP8.46□□□□□ -1.05
CDKL5-204ENST00000623364 TRIM75PA6NK02 468 aa8.46□□□□□ -1.06
CDKL5-204ENST00000623364 CACNB3P54284 484 aa8.46□□□□□ -1.06
CDKL5-204ENST00000623364 PROSER3Q2NL68 480 aa8.46□□□□□ -1.06
CDKL5-204ENST00000623364 EP400NLQ6ZTU2 488 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms