RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 ARID5BQ14865 1188 aa9.57□□□□□ -0.88
SND1-IT1-201ENST00000623342 LONRF3Q496Y0 759 aa9.57□□□□□ -0.88
SND1-IT1-201ENST00000623342 TPTE2Q6XPS3 522 aa9.57□□□□□ -0.88
SND1-IT1-201ENST00000623342 CCDC24Q8N4L8 307 aa9.57□□□□□ -0.88
SND1-IT1-201ENST00000623342 CNNM3Q8NE01 707 aa9.57□□□□□ -0.88
SND1-IT1-201ENST00000623342 OSBPL5Q9H0X9 879 aaPredicted RBP9.57□□□□□ -0.88
SND1-IT1-201ENST00000623342 RBM28Q9NW13 759 aaKnown RBP9.57□□□□□ -0.88
SND1-IT1-201ENST00000623342 FBXO2Q9UK22 296 aaPredicted RBP9.57□□□□□ -0.88
SND1-IT1-201ENST00000623342 CEP131Q9UPN4 1083 aa9.57□□□□□ -0.88
SND1-IT1-201ENST00000623342 USP17L12C9JPN9 530 aa9.56□□□□□ -0.88
SND1-IT1-201ENST00000623342 USP17L21D6R901 530 aa9.56□□□□□ -0.88
SND1-IT1-201ENST00000623342 GNPATO15228 680 aa9.56□□□□□ -0.88
SND1-IT1-201ENST00000623342 SMC2O95347 1197 aa9.56□□□□□ -0.88
SND1-IT1-201ENST00000623342 CALM1P0DP23 149 aa9.56□□□□□ -0.88
SND1-IT1-201ENST00000623342 CALM2P0DP24 149 aa9.56□□□□□ -0.88
SND1-IT1-201ENST00000623342 CALM3P0DP25 149 aa9.56□□□□□ -0.88
SND1-IT1-201ENST00000623342 NR5A1Q13285 461 aa9.56□□□□□ -0.88
SND1-IT1-201ENST00000623342 ISM2Q6H9L7 571 aa9.56□□□□□ -0.88
SND1-IT1-201ENST00000623342 TMED8Q6PL24 325 aaPredicted RBP9.56□□□□□ -0.88
SND1-IT1-201ENST00000623342 MTERF4Q7Z6M4 381 aaKnown RBP9.56□□□□□ -0.88
SND1-IT1-201ENST00000623342 METTL16Q86W50 562 aaKnown RBP9.56□□□□□ -0.88
SND1-IT1-201ENST00000623342 ZNF579Q8NAF0 562 aaKnown RBP9.56□□□□□ -0.88
SND1-IT1-201ENST00000623342 CRNKL1Q9BZJ0 848 aaKnown RBP9.56□□□□□ -0.88
SND1-IT1-201ENST00000623342 XPO4Q9C0E2 1151 aaKnown RBP9.56□□□□□ -0.88
SND1-IT1-201ENST00000623342 IFNKQ9P0W0 207 aa9.56□□□□□ -0.88
SND1-IT1-201ENST00000623342 HOOK1Q9UJC3 728 aaKnown RBP9.56□□□□□ -0.88
SND1-IT1-201ENST00000623342 BAZ2AQ9UIF9 1905 aaKnown RBP9.56□□□□□ -0.88
SND1-IT1-201ENST00000623342 PRPF3O43395 683 aaKnown RBP9.56□□□□□ -0.88
SND1-IT1-201ENST00000623342 SKILP12757 684 aa9.56□□□□□ -0.88
SND1-IT1-201ENST00000623342 TPD52L1Q16890 204 aaPredicted RBP9.56□□□□□ -0.88
SND1-IT1-201ENST00000623342 OLFM4Q6UX06 510 aa9.56□□□□□ -0.88
SND1-IT1-201ENST00000623342 FNBP4Q8N3X1 1017 aaPredicted RBP9.56□□□□□ -0.88
SND1-IT1-201ENST00000623342 OXER1Q8TDS5 423 aa9.56□□□□□ -0.88
SND1-IT1-201ENST00000623342 C16orf45Q96MC5 204 aaPredicted RBP9.56□□□□□ -0.88
SND1-IT1-201ENST00000623342 TFCP2L1Q9NZI6 479 aa9.56□□□□□ -0.88
SND1-IT1-201ENST00000623342 RTCBQ9Y3I0 505 aaKnown RBP9.56□□□□□ -0.88
SND1-IT1-201ENST00000623342 PCDHB6Q9Y5E3 794 aa9.56□□□□□ -0.88
SND1-IT1-201ENST00000623342 MYH13Q9UKX3 1938 aa9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 RIOK3O14730 519 aaKnown RBP9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 ORC4O43929 436 aa9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 PRDM1O75626 825 aa9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 DDAH1O94760 285 aa9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 CCZ1BP86790 482 aa9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 CCZ1P86791 482 aaPredicted RBP9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 FUT2Q10981 343 aa9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 TROAPQ12815 778 aa9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 DHX8Q14562 1220 aaKnown RBP9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 PKN1Q16512 942 aa9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 CABP5Q9NP86 173 aa9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 DCP1AQ9NPI6 582 aaPredicted RBP9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 ATP8A2Q9NTI2 1148 aa9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 AATFQ9NY61 560 aaKnown RBP eCLIP9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 CCNL1Q9UK58 526 aaPredicted RBP9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 SRPRBQ9Y5M8 271 aaKnown RBP9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 DLEC1Q9Y238 1755 aa9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 MYH2Q9UKX2 1941 aa9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 BTAF1O14981 1849 aa9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 MYH6P13533 1939 aa9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 ZBTB22O15209 634 aa9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 TNNT1P13805 278 aa9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 KRT2P35908 639 aa9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 MDM2Q00987 491 aaPredicted RBP9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 MYL5Q02045 173 aa9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 SPECC1Q5M775 1068 aa9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 NOL10Q9BSC4 688 aaKnown RBP9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 PHF20Q9BVI0 1012 aa9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 VPS54Q9P1Q0 977 aa9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 PCDHA5Q9Y5H7 936 aa9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 MORC2Q9Y6X9 1032 aaPredicted RBP9.55□□□□□ -0.88
SND1-IT1-201ENST00000623342 MAST2Q6P0Q8 1798 aa9.54□□□□□ -0.88
SND1-IT1-201ENST00000623342 MYO1BO43795 1136 aa9.54□□□□□ -0.88
SND1-IT1-201ENST00000623342 PLEKHA8P1O95397 391 aa9.54□□□□□ -0.88
SND1-IT1-201ENST00000623342 LMOD1P29536 600 aaPredicted RBP9.54□□□□□ -0.88
SND1-IT1-201ENST00000623342 PRDX5P30044 214 aa9.54□□□□□ -0.88
SND1-IT1-201ENST00000623342 TM4SF1P30408 202 aa9.54□□□□□ -0.88
SND1-IT1-201ENST00000623342 FANCCQ00597 558 aa9.54□□□□□ -0.88
SND1-IT1-201ENST00000623342 GRIN1Q05586 938 aa9.54□□□□□ -0.88
SND1-IT1-201ENST00000623342 TMC6Q7Z403 805 aa9.54□□□□□ -0.88
SND1-IT1-201ENST00000623342 FOXP4Q8IVH2 680 aaPredicted RBP9.54□□□□□ -0.88
SND1-IT1-201ENST00000623342 CCDC150Q8NCX0 1101 aa9.54□□□□□ -0.88
SND1-IT1-201ENST00000623342 CERKQ8TCT0 537 aa9.54□□□□□ -0.88
SND1-IT1-201ENST00000623342 SHISA4Q96DD7 197 aa9.54□□□□□ -0.88
SND1-IT1-201ENST00000623342 HSD3B7Q9H2F3 369 aa9.54□□□□□ -0.88
SND1-IT1-201ENST00000623342 ARPP21Q9UBL0 812 aaPredicted RBP9.54□□□□□ -0.88
SND1-IT1-201ENST00000623342 V9GY48 417 aaPredicted RBP9.54□□□□□ -0.88
SND1-IT1-201ENST00000623342 NHSQ6T4R5 1651 aa9.54□□□□□ -0.88
SND1-IT1-201ENST00000623342 LAMB1P07942 1786 aa9.54□□□□□ -0.88
SND1-IT1-201ENST00000623342 TRIM75PA6NK02 468 aa9.54□□□□□ -0.88
SND1-IT1-201ENST00000623342 POLR2DO15514 142 aaKnown RBP9.54□□□□□ -0.88
SND1-IT1-201ENST00000623342 ATP2B1P20020 1258 aa9.54□□□□□ -0.88
SND1-IT1-201ENST00000623342 POSTNQ15063 836 aa9.54□□□□□ -0.88
SND1-IT1-201ENST00000623342 SBK1Q52WX2 424 aa9.54□□□□□ -0.88
SND1-IT1-201ENST00000623342 SPTY2D1Q68D10 685 aaPredicted RBP9.54□□□□□ -0.88
SND1-IT1-201ENST00000623342 TMTC3Q6ZXV5 915 aa9.54□□□□□ -0.88
SND1-IT1-201ENST00000623342 ARHGEF1Q92888 912 aaKnown RBP9.54□□□□□ -0.88
SND1-IT1-201ENST00000623342 BRMS1Q9HCU9 246 aa9.54□□□□□ -0.88
SND1-IT1-201ENST00000623342 KCND1Q9NSA2 647 aa9.54□□□□□ -0.88
SND1-IT1-201ENST00000623342 PAXBP1Q9Y5B6 917 aa9.54□□□□□ -0.88
SND1-IT1-201ENST00000623342 CBFA2T2O43439 604 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms