RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 KCNQ4P56696 695 aa14.54□□□□□ -0.08
MSH6-215ENST00000622629 GSTO1P78417 241 aa14.54□□□□□ -0.08
MSH6-215ENST00000622629 SLF2Q8IX21 1173 aa14.54□□□□□ -0.08
MSH6-215ENST00000622629 NYXQ9GZU5 481 aa14.54□□□□□ -0.08
MSH6-215ENST00000622629 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.54□□□□□ -0.08
MSH6-215ENST00000622629 DIP2AQ14689 1571 aa14.54□□□□□ -0.08
MSH6-215ENST00000622629 SYNRGQ9UMZ2 1314 aa14.54□□□□□ -0.08
MSH6-215ENST00000622629 MED23Q9ULK4 1368 aa14.54□□□□□ -0.08
MSH6-215ENST00000622629 CTAGE15A4D2H0 777 aa14.54□□□□□ -0.08
MSH6-215ENST00000622629 CTAGE9A4FU28 777 aa14.54□□□□□ -0.08
MSH6-215ENST00000622629 RHOXF2BP0C7M4 288 aa14.54□□□□□ -0.08
MSH6-215ENST00000622629 CTAGE8P0CG41 777 aa14.54□□□□□ -0.08
MSH6-215ENST00000622629 ATP1A3P13637 1013 aa14.54□□□□□ -0.08
MSH6-215ENST00000622629 CTAGE6Q86UF2 777 aa14.54□□□□□ -0.08
MSH6-215ENST00000622629 CTAGE4Q8IX94 777 aa14.54□□□□□ -0.08
MSH6-215ENST00000622629 RHOXF2Q9BQY4 288 aa14.54□□□□□ -0.08
MSH6-215ENST00000622629 BRD2P25440 801 aaKnown RBP14.53□□□□□ -0.08
MSH6-215ENST00000622629 LMAN1P49257 510 aa14.53□□□□□ -0.08
MSH6-215ENST00000622629 RASGRF1Q13972 1273 aa14.53□□□□□ -0.08
MSH6-215ENST00000622629 SPECC1LQ69YQ0 1117 aa14.53□□□□□ -0.08
MSH6-215ENST00000622629 GRAMD1CQ8IYS0 662 aa14.53□□□□□ -0.08
MSH6-215ENST00000622629 LCORLQ8N3X6 602 aa14.53□□□□□ -0.08
MSH6-215ENST00000622629 GOLGA1Q92805 767 aa14.53□□□□□ -0.08
MSH6-215ENST00000622629 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.53□□□□□ -0.08
MSH6-215ENST00000622629 MMRN2Q9H8L6 949 aa14.53□□□□□ -0.08
MSH6-215ENST00000622629 PXDNLA1KZ92 1463 aa14.53□□□□□ -0.08
MSH6-215ENST00000622629 SH2B2O14492 632 aaPredicted RBP14.53□□□□□ -0.08
MSH6-215ENST00000622629 FGFR1OPO95684 399 aaKnown RBP14.53□□□□□ -0.08
MSH6-215ENST00000622629 LUC7L2Q9Y383 392 aaKnown RBP14.53□□□□□ -0.08
MSH6-215ENST00000622629 TFAP4Q01664 338 aa14.52□□□□□ -0.08
MSH6-215ENST00000622629 TRMT1LQ7Z2T5 733 aaKnown RBP14.52□□□□□ -0.08
MSH6-215ENST00000622629 CNGA4Q8IV77 575 aa14.52□□□□□ -0.08
MSH6-215ENST00000622629 SMARCC2Q8TAQ2 1214 aa14.52□□□□□ -0.08
MSH6-215ENST00000622629 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.52□□□□□ -0.08
MSH6-215ENST00000622629 TAB2Q9NYJ8 693 aa14.52□□□□□ -0.08
MSH6-215ENST00000622629 LOC102724428A0A0B4J2F2 783 aa14.52□□□□□ -0.08
MSH6-215ENST00000622629 MYO1BO43795 1136 aa14.52□□□□□ -0.08
MSH6-215ENST00000622629 TNNI2P48788 182 aa14.52□□□□□ -0.08
MSH6-215ENST00000622629 SIK1P57059 783 aa14.52□□□□□ -0.08
MSH6-215ENST00000622629 RPS8P62241 208 aaKnown RBP14.52□□□□□ -0.08
MSH6-215ENST00000622629 CCDC144BQ3MJ40 725 aa14.52□□□□□ -0.08
MSH6-215ENST00000622629 LONRF3Q496Y0 759 aa14.52□□□□□ -0.08
MSH6-215ENST00000622629 TCERG1LQ5VWI1 586 aa14.52□□□□□ -0.08
MSH6-215ENST00000622629 TBC1D10CQ8IV04 446 aa14.52□□□□□ -0.08
MSH6-215ENST00000622629 ANKRD2Q9GZV1 360 aa14.52□□□□□ -0.08
MSH6-215ENST00000622629 IL6STP40189 918 aaPredicted RBP14.52□□□□□ -0.09
MSH6-215ENST00000622629 PAFAH1B1P43034 410 aa14.52□□□□□ -0.09
MSH6-215ENST00000622629 RFX5P48382 616 aaPredicted RBP14.52□□□□□ -0.09
MSH6-215ENST00000622629 WWC2Q6AWC2 1192 aa14.52□□□□□ -0.09
MSH6-215ENST00000622629 FAM114A1Q8IWE2 563 aa14.52□□□□□ -0.09
MSH6-215ENST00000622629 TXLNBQ8N3L3 684 aa14.52□□□□□ -0.09
MSH6-215ENST00000622629 C6orf50Q9HD87 102 aa14.52□□□□□ -0.09
MSH6-215ENST00000622629 CRKLP46109 303 aaKnown RBP14.52□□□□□ -0.09
MSH6-215ENST00000622629 ETF1P62495 437 aaKnown RBP14.52□□□□□ -0.09
MSH6-215ENST00000622629 PPP2R3AQ06190 1150 aa14.52□□□□□ -0.09
MSH6-215ENST00000622629 USPL1Q5W0Q7 1092 aa14.52□□□□□ -0.09
MSH6-215ENST00000622629 COBLO75128 1261 aa14.51□□□□□ -0.09
MSH6-215ENST00000622629 CYLC1P35663 651 aaPredicted RBP14.51□□□□□ -0.09
MSH6-215ENST00000622629 GPIHBP1Q8IV16 184 aa14.51□□□□□ -0.09
MSH6-215ENST00000622629 TAF4BQ92750 862 aa14.51□□□□□ -0.09
MSH6-215ENST00000622629 CAPZA3Q96KX2 299 aa14.51□□□□□ -0.09
MSH6-215ENST00000622629 STRBPQ96SI9 672 aaKnown RBP14.51□□□□□ -0.09
MSH6-215ENST00000622629 ZSCAN10Q96SZ4 725 aaPredicted RBP14.51□□□□□ -0.09
MSH6-215ENST00000622629 CYP2D7A0A087X1C5 515 aa14.51□□□□□ -0.09
MSH6-215ENST00000622629 ERCC3P19447 782 aa14.51□□□□□ -0.09
MSH6-215ENST00000622629 MAP9Q49MG5 647 aa14.51□□□□□ -0.09
MSH6-215ENST00000622629 ZNF804AQ7Z570 1209 aa14.51□□□□□ -0.09
MSH6-215ENST00000622629 SMAP1Q8IYB5 467 aaPredicted RBP14.51□□□□□ -0.09
MSH6-215ENST00000622629 EEF2KMTQ96G04 330 aa14.51□□□□□ -0.09
MSH6-215ENST00000622629 MYO5BQ9ULV0 1848 aa14.51□□□□□ -0.09
MSH6-215ENST00000622629 PHACTR2O75167 634 aa14.51□□□□□ -0.09
MSH6-215ENST00000622629 KRT9P35527 623 aa14.51□□□□□ -0.09
MSH6-215ENST00000622629 EIF6P56537 245 aaKnown RBP14.51□□□□□ -0.09
MSH6-215ENST00000622629 ZFYVE27Q5T4F4 411 aa14.51□□□□□ -0.09
MSH6-215ENST00000622629 ITSN1Q15811 1721 aa14.51□□□□□ -0.09
MSH6-215ENST00000622629 DYNLL1P63167 89 aaKnown RBP14.5□□□□□ -0.09
MSH6-215ENST00000622629 CYB5R4Q7L1T6 521 aa14.5□□□□□ -0.09
MSH6-215ENST00000622629 ZFP91Q96JP5 570 aaPredicted RBP14.5□□□□□ -0.09
MSH6-215ENST00000622629 QTRT2Q9H974 415 aaKnown RBP14.5□□□□□ -0.09
MSH6-215ENST00000622629 PPP2R5BQ15173 497 aa14.5□□□□□ -0.09
MSH6-215ENST00000622629 C3P01024 1663 aa14.5□□□□□ -0.09
MSH6-215ENST00000622629 RIMBP2O15034 1052 aa14.5□□□□□ -0.09
MSH6-215ENST00000622629 EXOSC10Q01780 885 aaKnown RBP14.5□□□□□ -0.09
MSH6-215ENST00000622629 TEX11Q8IYF3 940 aa14.5□□□□□ -0.09
MSH6-215ENST00000622629 FERMT2Q96AC1 680 aa14.5□□□□□ -0.09
MSH6-215ENST00000622629 RRP36Q96EU6 259 aaKnown RBP14.5□□□□□ -0.09
MSH6-215ENST00000622629 ISCA1Q9BUE6 129 aa14.5□□□□□ -0.09
MSH6-215ENST00000622629 CSRNP2Q9H175 543 aa14.5□□□□□ -0.09
MSH6-215ENST00000622629 HSPA1LP34931 641 aa14.5□□□□□ -0.09
MSH6-215ENST00000622629 SUSD4Q5VX71 490 aa14.5□□□□□ -0.09
MSH6-215ENST00000622629 MAPKAPK5Q8IW41 473 aa14.5□□□□□ -0.09
MSH6-215ENST00000622629 FMR1NBQ8N0W7 255 aaPredicted RBP14.5□□□□□ -0.09
MSH6-215ENST00000622629 ALDH8A1Q9H2A2 487 aaPredicted RBP14.5□□□□□ -0.09
MSH6-215ENST00000622629 H0YHG0 523 aa14.49□□□□□ -0.09
MSH6-215ENST00000622629 POTEB2H3BUK9 544 aa14.49□□□□□ -0.09
MSH6-215ENST00000622629 PPP6R2O75170 966 aa14.49□□□□□ -0.09
MSH6-215ENST00000622629 ARID5AQ03989 594 aa14.49□□□□□ -0.09
MSH6-215ENST00000622629 PAK1Q13153 545 aa14.49□□□□□ -0.09
MSH6-215ENST00000622629 MB21D2Q8IYB1 491 aaPredicted RBP14.49□□□□□ -0.09
MSH6-215ENST00000622629 CCDC42Q96M95 316 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms