RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 IFIT3O14879 490 aaKnown RBP20.97■□□□□ 0.95
PTCHD3-202ENST00000622555 TSPY3P0CV98 308 aa20.97■□□□□ 0.95
PTCHD3-202ENST00000622555 TSPY8P0CW00 308 aa20.97■□□□□ 0.95
PTCHD3-202ENST00000622555 SHMT1P34896 483 aa20.97■□□□□ 0.95
PTCHD3-202ENST00000622555 IQCA1Q86XH1 822 aa20.97■□□□□ 0.95
PTCHD3-202ENST00000622555 GPHNQ9NQX3 736 aaPredicted RBP20.97■□□□□ 0.95
PTCHD3-202ENST00000622555 PGAP2Q9UHJ9 254 aa20.97■□□□□ 0.95
PTCHD3-202ENST00000622555 LIMCH1Q9UPQ0 1083 aa20.97■□□□□ 0.95
PTCHD3-202ENST00000622555 EAPPQ56P03 285 aaPredicted RBP20.96■□□□□ 0.95
PTCHD3-202ENST00000622555 TMEM67Q5HYA8 995 aa20.96■□□□□ 0.95
PTCHD3-202ENST00000622555 METTL16Q86W50 562 aaKnown RBP20.96■□□□□ 0.95
PTCHD3-202ENST00000622555 DCPSQ96C86 337 aaKnown RBP20.96■□□□□ 0.95
PTCHD3-202ENST00000622555 TEPSINQ96N21 525 aa20.96■□□□□ 0.95
PTCHD3-202ENST00000622555 AGXT2Q9BYV1 514 aa20.96■□□□□ 0.95
PTCHD3-202ENST00000622555 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.96■□□□□ 0.95
PTCHD3-202ENST00000622555 DAXXQ9UER7 740 aaPredicted RBP20.96■□□□□ 0.95
PTCHD3-202ENST00000622555 HERC5Q9UII4 1024 aaKnown RBP20.96■□□□□ 0.95
PTCHD3-202ENST00000622555 ERICH2A1L162 156 aa20.95■□□□□ 0.94
PTCHD3-202ENST00000622555 SH2B2O14492 632 aaPredicted RBP20.95■□□□□ 0.94
PTCHD3-202ENST00000622555 FBXL16Q8N461 479 aa20.95■□□□□ 0.94
PTCHD3-202ENST00000622555 IGDCC4Q8TDY8 1250 aa20.95■□□□□ 0.94
PTCHD3-202ENST00000622555 ZSCAN10Q96SZ4 725 aaPredicted RBP20.95■□□□□ 0.94
PTCHD3-202ENST00000622555 MTA3Q9BTC8 594 aa20.95■□□□□ 0.94
PTCHD3-202ENST00000622555 ANGEL1Q9UNK9 670 aaKnown RBP20.95■□□□□ 0.94
PTCHD3-202ENST00000622555 SLC4A3P48751 1232 aa20.95■□□□□ 0.94
PTCHD3-202ENST00000622555 PNMA8AQ86V59 439 aaPredicted RBP20.95■□□□□ 0.94
PTCHD3-202ENST00000622555 TNKSO95271 1327 aa20.95■□□□□ 0.94
PTCHD3-202ENST00000622555 APOBRQ0VD83 1088 aa20.94■□□□□ 0.94
PTCHD3-202ENST00000622555 TMX3Q96JJ7 454 aa20.94■□□□□ 0.94
PTCHD3-202ENST00000622555 TPCN1Q9ULQ1 816 aa20.94■□□□□ 0.94
PTCHD3-202ENST00000622555 PPP2R3BQ9Y5P8 575 aa20.94■□□□□ 0.94
PTCHD3-202ENST00000622555 NMT2O60551 498 aa20.93■□□□□ 0.94
PTCHD3-202ENST00000622555 AKR1B1P15121 316 aa20.93■□□□□ 0.94
PTCHD3-202ENST00000622555 WTAPQ15007 396 aa20.93■□□□□ 0.94
PTCHD3-202ENST00000622555 TATDN1Q6P1N9 297 aa20.93■□□□□ 0.94
PTCHD3-202ENST00000622555 MIGA2Q7L4E1 593 aa20.93■□□□□ 0.94
PTCHD3-202ENST00000622555 SULF1Q8IWU6 871 aa20.93■□□□□ 0.94
PTCHD3-202ENST00000622555 NEDD1Q8NHV4 660 aa20.93■□□□□ 0.94
PTCHD3-202ENST00000622555 ZC3H15Q8WU90 426 aaKnown RBP20.93■□□□□ 0.94
PTCHD3-202ENST00000622555 LY9Q9HBG7 655 aa20.93■□□□□ 0.94
PTCHD3-202ENST00000622555 TBC1D12O60347 775 aa20.92■□□□□ 0.94
PTCHD3-202ENST00000622555 CERKLQ49MI3 558 aaPredicted RBP20.92■□□□□ 0.94
PTCHD3-202ENST00000622555 NBPF12Q5TAG4 269 aaPredicted RBP20.92■□□□□ 0.94
PTCHD3-202ENST00000622555 NFXL1Q6ZNB6 911 aa20.92■□□□□ 0.94
PTCHD3-202ENST00000622555 ENAHQ8N8S7 591 aaPredicted RBP20.92■□□□□ 0.94
PTCHD3-202ENST00000622555 ZSCAN31Q96LW9 406 aaPredicted RBP20.92■□□□□ 0.94
PTCHD3-202ENST00000622555 CCDC17Q96LX7 622 aa20.92■□□□□ 0.94
PTCHD3-202ENST00000622555 RRAGCQ9HB90 399 aa20.92■□□□□ 0.94
PTCHD3-202ENST00000622555 NAP1L2Q9ULW6 460 aaPredicted RBP20.92■□□□□ 0.94
PTCHD3-202ENST00000622555 MPHOSPH10O00566 681 aaKnown RBP20.92■□□□□ 0.94
PTCHD3-202ENST00000622555 VEGFAP15692 232 aaPredicted RBP20.92■□□□□ 0.94
PTCHD3-202ENST00000622555 LIFRP42702 1097 aa20.92■□□□□ 0.94
PTCHD3-202ENST00000622555 PRAMEF18Q5VWM3 479 aa20.92■□□□□ 0.94
PTCHD3-202ENST00000622555 SENP2Q9HC62 589 aa20.92■□□□□ 0.94
PTCHD3-202ENST00000622555 TCP11L1Q9NUJ3 509 aa20.92■□□□□ 0.94
PTCHD3-202ENST00000622555 GREB1LQ9C091 1923 aaPredicted RBP20.91■□□□□ 0.94
PTCHD3-202ENST00000622555 PLIN4Q96Q06 1357 aa20.91■□□□□ 0.94
PTCHD3-202ENST00000622555 LARGE1O95461 756 aa20.91■□□□□ 0.94
PTCHD3-202ENST00000622555 SEC23AQ15436 765 aa20.91■□□□□ 0.94
PTCHD3-202ENST00000622555 CCDC178Q5BJE1 867 aa20.91■□□□□ 0.94
PTCHD3-202ENST00000622555 KRT26Q7Z3Y9 468 aa20.91■□□□□ 0.94
PTCHD3-202ENST00000622555 SH2B1Q9NRF2 756 aaPredicted RBP20.91■□□□□ 0.94
PTCHD3-202ENST00000622555 IL17RBQ9NRM6 502 aa20.91■□□□□ 0.94
PTCHD3-202ENST00000622555 KLF18A0A0U1RQI7 1052 aa20.9■□□□□ 0.94
PTCHD3-202ENST00000622555 CCDC69A6NI79 296 aa20.9■□□□□ 0.94
PTCHD3-202ENST00000622555 ADM5C9JUS6 153 aa20.9■□□□□ 0.94
PTCHD3-202ENST00000622555 ME3Q16798 604 aa20.9■□□□□ 0.94
PTCHD3-202ENST00000622555 IFIT1BQ5T764 474 aaKnown RBP20.9■□□□□ 0.94
PTCHD3-202ENST00000622555 TMTC2Q8N394 836 aa20.9■□□□□ 0.94
PTCHD3-202ENST00000622555 ZNF526Q8TF50 670 aaPredicted RBP20.9■□□□□ 0.94
PTCHD3-202ENST00000622555 HOOK2Q96ED9 719 aa20.9■□□□□ 0.94
PTCHD3-202ENST00000622555 BRPF3Q9ULD4 1205 aa20.9■□□□□ 0.94
PTCHD3-202ENST00000622555 GDF11O95390 407 aa20.9■□□□□ 0.94
PTCHD3-202ENST00000622555 MAP3K10Q02779 954 aa20.9■□□□□ 0.94
PTCHD3-202ENST00000622555 STK3Q13188 491 aa20.9■□□□□ 0.94
PTCHD3-202ENST00000622555 SGMS1Q86VZ5 419 aa20.9■□□□□ 0.94
PTCHD3-202ENST00000622555 CLEC11AQ9Y240 323 aa20.9■□□□□ 0.94
PTCHD3-202ENST00000622555 HSP90AA1P07900 732 aaKnown RBP20.89■□□□□ 0.93
PTCHD3-202ENST00000622555 EVCP57679 992 aa20.89■□□□□ 0.93
PTCHD3-202ENST00000622555 ABCB5Q2M3G0 1257 aa20.89■□□□□ 0.93
PTCHD3-202ENST00000622555 DCAF15Q66K64 600 aa20.89■□□□□ 0.93
PTCHD3-202ENST00000622555 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.89■□□□□ 0.93
PTCHD3-202ENST00000622555 ATAD5Q96QE3 1844 aa20.88■□□□□ 0.93
PTCHD3-202ENST00000622555 GOLGA8BA8MQT2 603 aa20.88■□□□□ 0.93
PTCHD3-202ENST00000622555 RRP1BQ14684 758 aaKnown RBP20.88■□□□□ 0.93
PTCHD3-202ENST00000622555 SUPT20HL1Q3ZLR7 823 aa20.88■□□□□ 0.93
PTCHD3-202ENST00000622555 DGKHQ86XP1 1220 aa20.88■□□□□ 0.93
PTCHD3-202ENST00000622555 SPRYD3Q8NCJ5 442 aa20.88■□□□□ 0.93
PTCHD3-202ENST00000622555 ZNF274Q96GC6 653 aaPredicted RBP20.88■□□□□ 0.93
PTCHD3-202ENST00000622555 CEP95Q96GE4 821 aa20.88■□□□□ 0.93
PTCHD3-202ENST00000622555 SLKQ9H2G2 1235 aaPredicted RBP20.88■□□□□ 0.93
PTCHD3-202ENST00000622555 NMRK2Q9NPI5 230 aa20.88■□□□□ 0.93
PTCHD3-202ENST00000622555 SLC12A7Q9Y666 1083 aa20.88■□□□□ 0.93
PTCHD3-202ENST00000622555 MYH4Q9Y623 1939 aa20.88■□□□□ 0.93
PTCHD3-202ENST00000622555 PDIA3P30101 505 aaKnown RBP20.87■□□□□ 0.93
PTCHD3-202ENST00000622555 SHROOM1Q2M3G4 852 aaPredicted RBP20.87■□□□□ 0.93
PTCHD3-202ENST00000622555 RCSD1Q6JBY9 416 aa20.87■□□□□ 0.93
PTCHD3-202ENST00000622555 APOA5Q6Q788 366 aa20.87■□□□□ 0.93
PTCHD3-202ENST00000622555 SYNE3Q6ZMZ3 975 aa20.87■□□□□ 0.93
PTCHD3-202ENST00000622555 USP48Q86UV5 1035 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms