RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 PPATQ06203 517 aa17.1■□□□□ 0.33
CBWD3-217ENST00000621474 ALX1Q15699 326 aa17.1■□□□□ 0.33
CBWD3-217ENST00000621474 NACAP1Q9BZK3 213 aa17.1■□□□□ 0.33
CBWD3-217ENST00000621474 NAPBQ9H115 298 aa17.1■□□□□ 0.33
CBWD3-217ENST00000621474 SGSM2O43147 1006 aa17.1■□□□□ 0.33
CBWD3-217ENST00000621474 CDK8P49336 464 aa17.1■□□□□ 0.33
CBWD3-217ENST00000621474 TRIM34Q9BYJ4 488 aa17.1■□□□□ 0.33
CBWD3-217ENST00000621474 SWAP70Q9UH65 585 aa17.1■□□□□ 0.33
CBWD3-217ENST00000621474 TACC3Q9Y6A5 838 aa17.1■□□□□ 0.33
CBWD3-217ENST00000621474 MINDY4BA8MYZ0 360 aa17.09■□□□□ 0.33
CBWD3-217ENST00000621474 PPIL2Q13356 520 aa17.09■□□□□ 0.33
CBWD3-217ENST00000621474 TAOK2Q9UL54 1235 aa17.09■□□□□ 0.33
CBWD3-217ENST00000621474 ZBTB21Q9ULJ3 1066 aa17.09■□□□□ 0.33
CBWD3-217ENST00000621474 AFG3L2Q9Y4W6 797 aa17.09■□□□□ 0.33
CBWD3-217ENST00000621474 GUCY1A2P33402 732 aa17.08■□□□□ 0.32
CBWD3-217ENST00000621474 MFAP1P55081 439 aaKnown RBP17.08■□□□□ 0.32
CBWD3-217ENST00000621474 PPARAQ07869 468 aa17.08■□□□□ 0.32
CBWD3-217ENST00000621474 CERKLQ49MI3 558 aaPredicted RBP17.08■□□□□ 0.32
CBWD3-217ENST00000621474 AMOTL1Q8IY63 956 aa17.08■□□□□ 0.32
CBWD3-217ENST00000621474 PICK1Q9NRD5 415 aa17.08■□□□□ 0.32
CBWD3-217ENST00000621474 KCNH4Q9UQ05 1017 aa17.08■□□□□ 0.32
CBWD3-217ENST00000621474 ZHX2Q9Y6X8 837 aa17.08■□□□□ 0.32
CBWD3-217ENST00000621474 GH2P01242 217 aa17.07■□□□□ 0.32
CBWD3-217ENST00000621474 ASNSP08243 561 aa17.07■□□□□ 0.32
CBWD3-217ENST00000621474 STK11IPQ8N1F8 1099 aa17.07■□□□□ 0.32
CBWD3-217ENST00000621474 PTPN18Q99952 460 aa17.07■□□□□ 0.32
CBWD3-217ENST00000621474 DSCC1Q9BVC3 393 aa17.07■□□□□ 0.32
CBWD3-217ENST00000621474 NBPF3Q9H094 633 aa17.07■□□□□ 0.32
CBWD3-217ENST00000621474 ANAPC4Q9UJX5 808 aa17.07■□□□□ 0.32
CBWD3-217ENST00000621474 LOC285556D6RIA3 1793 aa17.07■□□□□ 0.32
CBWD3-217ENST00000621474 TESPA1A2RU30 521 aaPredicted RBP17.07■□□□□ 0.32
CBWD3-217ENST00000621474 AKR1B1P15121 316 aa17.07■□□□□ 0.32
CBWD3-217ENST00000621474 RASA1P20936 1047 aa17.07■□□□□ 0.32
CBWD3-217ENST00000621474 TM4SF4P48230 202 aa17.07■□□□□ 0.32
CBWD3-217ENST00000621474 PTH1RQ03431 593 aa17.07■□□□□ 0.32
CBWD3-217ENST00000621474 MOGSQ13724 837 aa17.07■□□□□ 0.32
CBWD3-217ENST00000621474 RUFY2Q8WXA3 655 aa17.07■□□□□ 0.32
CBWD3-217ENST00000621474 WBP1LQ9NX94 342 aa17.07■□□□□ 0.32
CBWD3-217ENST00000621474 MANSC4A6NHS7 340 aaPredicted RBP17.06■□□□□ 0.32
CBWD3-217ENST00000621474 IGF2BP3O00425 579 aaKnown RBP eCLIP17.06■□□□□ 0.32
CBWD3-217ENST00000621474 CTDSPL2Q05D32 466 aa17.06■□□□□ 0.32
CBWD3-217ENST00000621474 ABCB5Q2M3G0 1257 aa17.06■□□□□ 0.32
CBWD3-217ENST00000621474 BRI3BPQ8WY22 251 aa17.06■□□□□ 0.32
CBWD3-217ENST00000621474 ESYT1Q9BSJ8 1104 aa17.06■□□□□ 0.32
CBWD3-217ENST00000621474 INCENPQ9NQS7 918 aa17.06■□□□□ 0.32
CBWD3-217ENST00000621474 GINM1Q9NU53 330 aa17.06■□□□□ 0.32
CBWD3-217ENST00000621474 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.06■□□□□ 0.32
CBWD3-217ENST00000621474 PRDM1O75626 825 aa17.05■□□□□ 0.32
CBWD3-217ENST00000621474 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.05■□□□□ 0.32
CBWD3-217ENST00000621474 USP17L5A8MUK1 530 aa17.04■□□□□ 0.32
CBWD3-217ENST00000621474 CDC45O75419 566 aa17.04■□□□□ 0.32
CBWD3-217ENST00000621474 FGRP09769 529 aa17.04■□□□□ 0.32
CBWD3-217ENST00000621474 GTF2A2P52657 109 aa17.04■□□□□ 0.32
CBWD3-217ENST00000621474 HAND2P61296 217 aa17.04■□□□□ 0.32
CBWD3-217ENST00000621474 MAP2K1Q02750 393 aaPredicted RBP17.04■□□□□ 0.32
CBWD3-217ENST00000621474 CLEC10AQ8IUN9 316 aa17.04■□□□□ 0.32
CBWD3-217ENST00000621474 NKX2-3Q8TAU0 364 aa17.04■□□□□ 0.32
CBWD3-217ENST00000621474 CCL15-CCL14A0A0B4J2E2 113 aa17.03■□□□□ 0.32
CBWD3-217ENST00000621474 A0A0G2JLL6 359 aaPredicted RBP17.03■□□□□ 0.32
CBWD3-217ENST00000621474 TRIM75PA6NK02 468 aa17.03■□□□□ 0.32
CBWD3-217ENST00000621474 SREBF2Q12772 1141 aa17.03■□□□□ 0.32
CBWD3-217ENST00000621474 SPP2Q13103 211 aa17.03■□□□□ 0.32
CBWD3-217ENST00000621474 SNAPC2Q13487 334 aa17.03■□□□□ 0.32
CBWD3-217ENST00000621474 DGKZQ13574 1117 aa17.03■□□□□ 0.32
CBWD3-217ENST00000621474 SEPT2Q15019 361 aa17.03■□□□□ 0.32
CBWD3-217ENST00000621474 RAB3GAP1Q15042 981 aa17.03■□□□□ 0.32
CBWD3-217ENST00000621474 CCL15Q16663 113 aa17.03■□□□□ 0.32
CBWD3-217ENST00000621474 PRRT2Q7Z6L0 340 aaPredicted RBP17.03■□□□□ 0.32
CBWD3-217ENST00000621474 IFNL1Q8IU54 200 aa17.03■□□□□ 0.32
CBWD3-217ENST00000621474 TBC1D10CQ8IV04 446 aa17.03■□□□□ 0.32
CBWD3-217ENST00000621474 ZNF280CQ8ND82 737 aa17.03■□□□□ 0.32
CBWD3-217ENST00000621474 WDR18Q9BV38 432 aa17.03■□□□□ 0.32
CBWD3-217ENST00000621474 CXCL11O14625 94 aa17.03■□□□□ 0.32
CBWD3-217ENST00000621474 SIAH1Q8IUQ4 282 aa17.03■□□□□ 0.32
CBWD3-217ENST00000621474 REM2Q8IYK8 340 aaPredicted RBP17.03■□□□□ 0.32
CBWD3-217ENST00000621474 FAM43AQ8N2R8 423 aa17.03■□□□□ 0.32
CBWD3-217ENST00000621474 CCDC17Q96LX7 622 aa17.03■□□□□ 0.32
CBWD3-217ENST00000621474 TBC1D2Q9BYX2 928 aa17.03■□□□□ 0.32
CBWD3-217ENST00000621474 LSG1Q9H089 658 aaKnown RBP17.03■□□□□ 0.32
CBWD3-217ENST00000621474 MYH4Q9Y623 1939 aa17.02■□□□□ 0.32
CBWD3-217ENST00000621474 HSPA1AP0DMV8 641 aaKnown RBP17.02■□□□□ 0.31
CBWD3-217ENST00000621474 HSPA1BP0DMV9 641 aaKnown RBP17.02■□□□□ 0.31
CBWD3-217ENST00000621474 INHBEP58166 350 aa17.02■□□□□ 0.31
CBWD3-217ENST00000621474 TMEM179Q6ZVK1 233 aa17.02■□□□□ 0.31
CBWD3-217ENST00000621474 MAP4K1Q92918 833 aa17.02■□□□□ 0.31
CBWD3-217ENST00000621474 MKNK2Q9HBH9 465 aa17.02■□□□□ 0.31
CBWD3-217ENST00000621474 CABP5Q9NP86 173 aa17.02■□□□□ 0.31
CBWD3-217ENST00000621474 RNF186Q9NXI6 227 aa17.02■□□□□ 0.31
CBWD3-217ENST00000621474 PLIN4Q96Q06 1357 aa17.02■□□□□ 0.31
CBWD3-217ENST00000621474 A0A1W2PRG0 241 aa17.01■□□□□ 0.31
CBWD3-217ENST00000621474 BTBD19C9JJ37 291 aa17.01■□□□□ 0.31
CBWD3-217ENST00000621474 MPHOSPH10O00566 681 aaKnown RBP17.01■□□□□ 0.31
CBWD3-217ENST00000621474 CETPP11597 493 aa17.01■□□□□ 0.31
CBWD3-217ENST00000621474 PDE4BQ07343 736 aa17.01■□□□□ 0.31
CBWD3-217ENST00000621474 MTMR2Q13614 643 aa17.01■□□□□ 0.31
CBWD3-217ENST00000621474 SH3D19Q5HYK7 790 aa17.01■□□□□ 0.31
CBWD3-217ENST00000621474 ACER1Q8TDN7 264 aa17.01■□□□□ 0.31
CBWD3-217ENST00000621474 STAG1Q8WVM7 1258 aa17.01■□□□□ 0.31
CBWD3-217ENST00000621474 AS3MTQ9HBK9 375 aa17.01■□□□□ 0.31
CBWD3-217ENST00000621474 IGKV6D-41A0A0C4DH26 115 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms