RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 FAM161BQ96MY7 647 aa11.17□□□□□ -0.62
SYN3-213ENST00000619146 NEUROD6Q96NK8 337 aa11.17□□□□□ -0.62
SYN3-213ENST00000619146 COL25A1Q9BXS0 654 aaPredicted RBP11.17□□□□□ -0.62
SYN3-213ENST00000619146 CRISPLD2Q9H0B8 497 aa11.17□□□□□ -0.62
SYN3-213ENST00000619146 CCDC8Q9H0W5 538 aaPredicted RBP11.17□□□□□ -0.62
SYN3-213ENST00000619146 AFG3L2Q9Y4W6 797 aa11.17□□□□□ -0.62
SYN3-213ENST00000619146 MYH8P13535 1937 aa11.16□□□□□ -0.62
SYN3-213ENST00000619146 RLFQ13129 1914 aa11.16□□□□□ -0.62
SYN3-213ENST00000619146 DDTLA6NHG4 134 aaPredicted RBP11.16□□□□□ -0.62
SYN3-213ENST00000619146 FGFR2P21802 821 aa11.16□□□□□ -0.62
SYN3-213ENST00000619146 TIMM10P62072 90 aa11.16□□□□□ -0.62
SYN3-213ENST00000619146 CCDC158Q5M9N0 1113 aa11.16□□□□□ -0.62
SYN3-213ENST00000619146 PXYLP1Q8TE99 480 aa11.16□□□□□ -0.62
SYN3-213ENST00000619146 MRIQ9BWK5 157 aa11.16□□□□□ -0.62
SYN3-213ENST00000619146 UBE2OQ9C0C9 1292 aaKnown RBP11.16□□□□□ -0.62
SYN3-213ENST00000619146 DBNLQ9UJU6 430 aaKnown RBP11.16□□□□□ -0.62
SYN3-213ENST00000619146 SUGT1Q9Y2Z0 365 aa11.16□□□□□ -0.62
SYN3-213ENST00000619146 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.16□□□□□ -0.62
SYN3-213ENST00000619146 ATRNL1Q5VV63 1379 aa11.16□□□□□ -0.62
SYN3-213ENST00000619146 ATP5JP18859 108 aa11.15□□□□□ -0.62
SYN3-213ENST00000619146 CYP2B6P20813 491 aa11.15□□□□□ -0.62
SYN3-213ENST00000619146 PHKA1P46020 1223 aa11.15□□□□□ -0.62
SYN3-213ENST00000619146 MDM2Q00987 491 aaPredicted RBP11.15□□□□□ -0.62
SYN3-213ENST00000619146 IRF5Q13568 498 aa11.15□□□□□ -0.62
SYN3-213ENST00000619146 TTC22Q5TAA0 569 aa11.15□□□□□ -0.62
SYN3-213ENST00000619146 XAGE2Q96GT9 111 aa11.15□□□□□ -0.62
SYN3-213ENST00000619146 ZNF512BQ96KM6 892 aaPredicted RBP11.15□□□□□ -0.62
SYN3-213ENST00000619146 DBNDD2Q9BQY9 259 aa11.15□□□□□ -0.62
SYN3-213ENST00000619146 DDX4Q9NQI0 724 aaKnown RBP11.15□□□□□ -0.62
SYN3-213ENST00000619146 MTMR10Q9NXD2 777 aa11.15□□□□□ -0.62
SYN3-213ENST00000619146 UQCRFS1P1P0C7P4 283 aa11.14□□□□□ -0.63
SYN3-213ENST00000619146 ADORA1P30542 326 aa11.14□□□□□ -0.63
SYN3-213ENST00000619146 TDHQ8IZJ6 230 aa11.14□□□□□ -0.63
SYN3-213ENST00000619146 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.14□□□□□ -0.63
SYN3-213ENST00000619146 NBPF3Q9H094 633 aa11.14□□□□□ -0.63
SYN3-213ENST00000619146 C11orf49Q9H6J7 331 aa11.14□□□□□ -0.63
SYN3-213ENST00000619146 HMX1Q9NP08 348 aaPredicted RBP11.14□□□□□ -0.63
SYN3-213ENST00000619146 GNL3LQ9NVN8 582 aaKnown RBP11.14□□□□□ -0.63
SYN3-213ENST00000619146 TLR7Q9NYK1 1049 aaKnown RBP11.14□□□□□ -0.63
SYN3-213ENST00000619146 STXBP5LQ9Y2K9 1186 aa11.14□□□□□ -0.63
SYN3-213ENST00000619146 HMGCRP04035 888 aa11.13□□□□□ -0.63
SYN3-213ENST00000619146 BMP8BP34820 402 aa11.13□□□□□ -0.63
SYN3-213ENST00000619146 HMGCS2P54868 508 aa11.13□□□□□ -0.63
SYN3-213ENST00000619146 SPP2Q13103 211 aa11.13□□□□□ -0.63
SYN3-213ENST00000619146 TTC39AQ5SRH9 613 aa11.13□□□□□ -0.63
SYN3-213ENST00000619146 PI4K2BQ8TCG2 481 aa11.13□□□□□ -0.63
SYN3-213ENST00000619146 TRIB2Q92519 343 aa11.13□□□□□ -0.63
SYN3-213ENST00000619146 ABCF2Q9UG63 623 aa11.13□□□□□ -0.63
SYN3-213ENST00000619146 AGTPBP1Q9UPW5 1226 aa11.13□□□□□ -0.63
SYN3-213ENST00000619146 PFASO15067 1338 aa11.12□□□□□ -0.63
SYN3-213ENST00000619146 RPTORQ8N122 1335 aa11.12□□□□□ -0.63
SYN3-213ENST00000619146 ZBTB22O15209 634 aa11.12□□□□□ -0.63
SYN3-213ENST00000619146 BTDP43251 543 aa11.12□□□□□ -0.63
SYN3-213ENST00000619146 TSHZ3Q63HK5 1081 aa11.12□□□□□ -0.63
SYN3-213ENST00000619146 CCDC102BQ68D86 513 aa11.12□□□□□ -0.63
SYN3-213ENST00000619146 TICAM2Q86XR7 235 aa11.12□□□□□ -0.63
SYN3-213ENST00000619146 DZIP1Q86YF9 867 aaKnown RBP11.12□□□□□ -0.63
SYN3-213ENST00000619146 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.12□□□□□ -0.63
SYN3-213ENST00000619146 HAUS7Q99871 368 aa11.12□□□□□ -0.63
SYN3-213ENST00000619146 GBF1Q92538 1859 aa11.12□□□□□ -0.63
SYN3-213ENST00000619146 PLXNA1Q9UIW2 1896 aa11.12□□□□□ -0.63
SYN3-213ENST00000619146 COL11A1P12107 1806 aaPredicted RBP11.12□□□□□ -0.63
SYN3-213ENST00000619146 TCF20Q9UGU0 1960 aaKnown RBP11.11□□□□□ -0.63
SYN3-213ENST00000619146 SEMA3EO15041 775 aa11.11□□□□□ -0.63
SYN3-213ENST00000619146 CTNND1O60716 968 aaKnown RBP11.11□□□□□ -0.63
SYN3-213ENST00000619146 EIF5BO60841 1220 aaKnown RBP11.11□□□□□ -0.63
SYN3-213ENST00000619146 ENTPD3O75355 529 aa11.11□□□□□ -0.63
SYN3-213ENST00000619146 PRKAR2AP13861 404 aaKnown RBP11.11□□□□□ -0.63
SYN3-213ENST00000619146 GSPT1P15170 499 aaKnown RBP11.11□□□□□ -0.63
SYN3-213ENST00000619146 RRP1BQ14684 758 aaKnown RBP11.11□□□□□ -0.63
SYN3-213ENST00000619146 FAM110CQ1W6H9 321 aa11.11□□□□□ -0.63
SYN3-213ENST00000619146 LRRC26Q2I0M4 334 aa11.11□□□□□ -0.63
SYN3-213ENST00000619146 CASC1Q6TDU7 716 aa11.11□□□□□ -0.63
SYN3-213ENST00000619146 EVI5LQ96CN4 794 aa11.11□□□□□ -0.63
SYN3-213ENST00000619146 ASCC2Q9H1I8 757 aaPredicted RBP11.11□□□□□ -0.63
SYN3-213ENST00000619146 BOLA2Q9H3K6 86 aa11.11□□□□□ -0.63
SYN3-213ENST00000619146 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.11□□□□□ -0.63
SYN3-213ENST00000619146 GJD2Q9UKL4 321 aa11.11□□□□□ -0.63
SYN3-213ENST00000619146 PNMA3Q9UL41 463 aa11.11□□□□□ -0.63
SYN3-213ENST00000619146 SLC45A1Q9Y2W3 748 aa11.11□□□□□ -0.63
SYN3-213ENST00000619146 RFX7Q2KHR2 1363 aa11.11□□□□□ -0.63
SYN3-213ENST00000619146 TTC28Q96AY4 2481 aa11.11□□□□□ -0.63
SYN3-213ENST00000619146 CDH23Q9H251 3354 aa11.11□□□□□ -0.63
SYN3-213ENST00000619146 TRIM6-TRIM34B2RNG4 842 aa11.1□□□□□ -0.63
SYN3-213ENST00000619146 SDSP20132 328 aa11.1□□□□□ -0.63
SYN3-213ENST00000619146 ARID4AP29374 1257 aaPredicted RBP11.1□□□□□ -0.63
SYN3-213ENST00000619146 CCND3P30281 292 aaPredicted RBP11.1□□□□□ -0.63
SYN3-213ENST00000619146 CCL14Q16627 93 aa11.1□□□□□ -0.63
SYN3-213ENST00000619146 SHROOM1Q2M3G4 852 aaPredicted RBP11.1□□□□□ -0.63
SYN3-213ENST00000619146 LRRFIP1Q32MZ4 808 aaKnown RBP11.1□□□□□ -0.63
SYN3-213ENST00000619146 LRIT3Q3SXY7 679 aa11.1□□□□□ -0.63
SYN3-213ENST00000619146 ANKLE1Q8NAG6 615 aa11.1□□□□□ -0.63
SYN3-213ENST00000619146 GUCD1Q96NT3 240 aa11.1□□□□□ -0.63
SYN3-213ENST00000619146 IDI2Q9BXS1 227 aa11.1□□□□□ -0.63
SYN3-213ENST00000619146 DENND2AQ9ULE3 1009 aa11.1□□□□□ -0.63
SYN3-213ENST00000619146 NDUFB9Q9Y6M9 179 aa11.1□□□□□ -0.63
SYN3-213ENST00000619146 SPTBN5Q9NRC6 3674 aaKnown RBP11.09□□□□□ -0.63
SYN3-213ENST00000619146 TTF1Q15361 905 aaPredicted RBP11.09□□□□□ -0.63
SYN3-213ENST00000619146 OGDHLQ9ULD0 1010 aa11.09□□□□□ -0.63
SYN3-213ENST00000619146 MROH7-TTC4A0A0A0MT08 1334 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms