RNA–Protein interactions for RNA: ENST00000618773.4

UCHL3-206, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

TSL 5 BASIC

Gene UCHL3, Length 1,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-206ENST00000618773 OTOP1Q7RTM1 612 aa12.96□□□□□ -0.33
UCHL3-206ENST00000618773 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.96□□□□□ -0.33
UCHL3-206ENST00000618773 BRI3BPQ8WY22 251 aa12.96□□□□□ -0.33
UCHL3-206ENST00000618773 DOCK1Q14185 1865 aa12.95□□□□□ -0.34
UCHL3-206ENST00000618773 ATAD5Q96QE3 1844 aa12.95□□□□□ -0.34
UCHL3-206ENST00000618773 KIF16BQ96L93 1317 aa12.95□□□□□ -0.34
UCHL3-206ENST00000618773 DXOO77932 396 aaKnown RBP12.95□□□□□ -0.34
UCHL3-206ENST00000618773 CLCN1P35523 988 aa12.95□□□□□ -0.34
UCHL3-206ENST00000618773 INHBEP58166 350 aa12.95□□□□□ -0.34
UCHL3-206ENST00000618773 ATG9AQ7Z3C6 839 aa12.95□□□□□ -0.34
UCHL3-206ENST00000618773 VPS37DQ86XT2 251 aa12.95□□□□□ -0.34
UCHL3-206ENST00000618773 TRMT2AQ8IZ69 625 aaKnown RBP12.95□□□□□ -0.34
UCHL3-206ENST00000618773 SNIP1Q8TAD8 396 aaKnown RBP12.95□□□□□ -0.34
UCHL3-206ENST00000618773 CD99L2Q8TCZ2 262 aa12.95□□□□□ -0.34
UCHL3-206ENST00000618773 HLA-CQ95604 372 aa12.95□□□□□ -0.34
UCHL3-206ENST00000618773 GPCPD1Q9NPB8 672 aa12.95□□□□□ -0.34
UCHL3-206ENST00000618773 DACH1Q9UI36 760 aa12.95□□□□□ -0.34
UCHL3-206ENST00000618773 TRIM17Q9Y577 477 aa12.95□□□□□ -0.34
UCHL3-206ENST00000618773 CDK5RAP2Q96SN8 1893 aa12.95□□□□□ -0.34
UCHL3-206ENST00000618773 MYO5AQ9Y4I1 1855 aaKnown RBP12.95□□□□□ -0.34
UCHL3-206ENST00000618773 RPAP1Q9BWH6 1393 aaPredicted RBP12.94□□□□□ -0.34
UCHL3-206ENST00000618773 EYA2O00167 538 aa12.94□□□□□ -0.34
UCHL3-206ENST00000618773 HOXA2O43364 376 aa12.94□□□□□ -0.34
UCHL3-206ENST00000618773 HDLBPQ00341 1268 aaKnown RBP12.94□□□□□ -0.34
UCHL3-206ENST00000618773 PUM3Q15397 648 aaKnown RBP12.94□□□□□ -0.34
UCHL3-206ENST00000618773 CAVIN4Q5BKX8 364 aa12.94□□□□□ -0.34
UCHL3-206ENST00000618773 APOBEC3HQ6NTF7 200 aaKnown RBP12.94□□□□□ -0.34
UCHL3-206ENST00000618773 TEKT1Q969V4 418 aa12.94□□□□□ -0.34
UCHL3-206ENST00000618773 ZDHHC15Q96MV8 337 aa12.94□□□□□ -0.34
UCHL3-206ENST00000618773 SMC4Q9NTJ3 1288 aa12.94□□□□□ -0.34
UCHL3-206ENST00000618773 SNCAIPQ9Y6H5 919 aa12.94□□□□□ -0.34
UCHL3-206ENST00000618773 FRAT2O75474 233 aaPredicted RBP12.93□□□□□ -0.34
UCHL3-206ENST00000618773 ALDH1L2Q3SY69 923 aa12.93□□□□□ -0.34
UCHL3-206ENST00000618773 TBC1D22AQ8WUA7 517 aa12.93□□□□□ -0.34
UCHL3-206ENST00000618773 SIL1Q9H173 461 aa12.93□□□□□ -0.34
UCHL3-206ENST00000618773 CCL15-CCL14A0A0B4J2E2 113 aa12.92□□□□□ -0.34
UCHL3-206ENST00000618773 SPDYE5A6NIY4 337 aa12.92□□□□□ -0.34
UCHL3-206ENST00000618773 PRDX5P30044 214 aa12.92□□□□□ -0.34
UCHL3-206ENST00000618773 TNNI2P48788 182 aa12.92□□□□□ -0.34
UCHL3-206ENST00000618773 CCL15Q16663 113 aa12.92□□□□□ -0.34
UCHL3-206ENST00000618773 FAM43AQ8N2R8 423 aa12.92□□□□□ -0.34
UCHL3-206ENST00000618773 ZKSCAN4Q969J2 545 aaPredicted RBP12.92□□□□□ -0.34
UCHL3-206ENST00000618773 MRGPRX2Q96LB1 330 aa12.92□□□□□ -0.34
UCHL3-206ENST00000618773 SIPA1L1O43166 1804 aa12.92□□□□□ -0.34
UCHL3-206ENST00000618773 MAST2Q6P0Q8 1798 aa12.92□□□□□ -0.34
UCHL3-206ENST00000618773 IFIT1P09914 478 aaKnown RBP12.91□□□□□ -0.34
UCHL3-206ENST00000618773 SLC5A1P13866 664 aa12.91□□□□□ -0.34
UCHL3-206ENST00000618773 SMCPP49901 116 aaPredicted RBP12.91□□□□□ -0.34
UCHL3-206ENST00000618773 DIXDC1Q155Q3 683 aa12.91□□□□□ -0.34
UCHL3-206ENST00000618773 LPIN2Q92539 896 aa12.91□□□□□ -0.34
UCHL3-206ENST00000618773 ERO1AQ96HE7 468 aa12.91□□□□□ -0.34
UCHL3-206ENST00000618773 WRNIP1Q96S55 665 aa12.91□□□□□ -0.34
UCHL3-206ENST00000618773 PA2G4Q9UQ80 394 aaKnown RBP12.91□□□□□ -0.34
UCHL3-206ENST00000618773 PTPN22Q9Y2R2 807 aa12.91□□□□□ -0.34
UCHL3-206ENST00000618773 DAGLAQ9Y4D2 1042 aa12.91□□□□□ -0.34
UCHL3-206ENST00000618773 RFX7Q2KHR2 1363 aa12.91□□□□□ -0.34
UCHL3-206ENST00000618773 MAST3O60307 1309 aa12.9□□□□□ -0.34
UCHL3-206ENST00000618773 FOCADQ5VW36 1801 aa12.9□□□□□ -0.34
UCHL3-206ENST00000618773 PHKA1P46020 1223 aa12.9□□□□□ -0.34
UCHL3-206ENST00000618773 SP3Q02447 781 aa12.9□□□□□ -0.34
UCHL3-206ENST00000618773 GUCA2AQ02747 115 aa12.9□□□□□ -0.34
UCHL3-206ENST00000618773 NFIAQ12857 509 aa12.9□□□□□ -0.34
UCHL3-206ENST00000618773 TAF1CQ15572 869 aaPredicted RBP12.9□□□□□ -0.34
UCHL3-206ENST00000618773 PRPF38BQ5VTL8 546 aaKnown RBP12.9□□□□□ -0.34
UCHL3-206ENST00000618773 HHIPL2Q6UWX4 724 aa12.9□□□□□ -0.34
UCHL3-206ENST00000618773 FAM83AQ86UY5 434 aa12.9□□□□□ -0.34
UCHL3-206ENST00000618773 MEIS3Q99687 375 aa12.9□□□□□ -0.34
UCHL3-206ENST00000618773 REPIN1Q9BWE0 567 aaKnown RBP12.9□□□□□ -0.34
UCHL3-206ENST00000618773 FAM217BQ9NTX9 383 aaPredicted RBP12.9□□□□□ -0.34
UCHL3-206ENST00000618773 GMPR2Q9P2T1 348 aaKnown RBP12.9□□□□□ -0.34
UCHL3-206ENST00000618773 NOB1Q9ULX3 412 aaKnown RBP12.9□□□□□ -0.34
UCHL3-206ENST00000618773 SUGT1Q9Y2Z0 365 aa12.9□□□□□ -0.34
UCHL3-206ENST00000618773 CSADQ9Y600 493 aa12.9□□□□□ -0.34
UCHL3-206ENST00000618773 LRRFIP2Q9Y608 721 aaKnown RBP12.9□□□□□ -0.34
UCHL3-206ENST00000618773 ATRNL1Q5VV63 1379 aa12.9□□□□□ -0.34
UCHL3-206ENST00000618773 CIAO1O76071 339 aa12.89□□□□□ -0.35
UCHL3-206ENST00000618773 UBTFL1P0CB47 393 aaPredicted RBP12.89□□□□□ -0.35
UCHL3-206ENST00000618773 SMPD1P17405 629 aa12.89□□□□□ -0.35
UCHL3-206ENST00000618773 ADORA1P30542 326 aa12.89□□□□□ -0.35
UCHL3-206ENST00000618773 INPP5BP32019 993 aa12.89□□□□□ -0.35
UCHL3-206ENST00000618773 GTF2A2P52657 109 aa12.89□□□□□ -0.35
UCHL3-206ENST00000618773 ATP2B3Q16720 1220 aa12.89□□□□□ -0.35
UCHL3-206ENST00000618773 FKBP1CQ5VVH2 108 aa12.89□□□□□ -0.35
UCHL3-206ENST00000618773 OTUD7BQ6GQQ9 843 aa12.89□□□□□ -0.35
UCHL3-206ENST00000618773 CDC42EP5Q6NZY7 148 aa12.89□□□□□ -0.35
UCHL3-206ENST00000618773 MRIQ9BWK5 157 aa12.89□□□□□ -0.35
UCHL3-206ENST00000618773 ARHGAP39Q9C0H5 1083 aa12.89□□□□□ -0.35
UCHL3-206ENST00000618773 EFCC1Q9HA90 598 aa12.89□□□□□ -0.35
UCHL3-206ENST00000618773 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.89□□□□□ -0.35
UCHL3-206ENST00000618773 LOC285556D6RIA3 1793 aa12.89□□□□□ -0.35
UCHL3-206ENST00000618773 BTBD19C9JJ37 291 aa12.88□□□□□ -0.35
UCHL3-206ENST00000618773 TCP10Q12799 353 aa12.88□□□□□ -0.35
UCHL3-206ENST00000618773 TREML4Q6UXN2 200 aa12.88□□□□□ -0.35
UCHL3-206ENST00000618773 MIGA2Q7L4E1 593 aa12.88□□□□□ -0.35
UCHL3-206ENST00000618773 ERO1BQ86YB8 467 aa12.88□□□□□ -0.35
UCHL3-206ENST00000618773 WDR66Q8TBY9 1149 aa12.88□□□□□ -0.35
UCHL3-206ENST00000618773 ARMC5Q96C12 935 aa12.88□□□□□ -0.35
UCHL3-206ENST00000618773 TMOD2Q9NZR1 351 aa12.88□□□□□ -0.35
UCHL3-206ENST00000618773 TNNQ9UQP3 1299 aa12.88□□□□□ -0.35
UCHL3-206ENST00000618773 SALL1Q9NSC2 1324 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms