RNA–Protein interactions for RNA: ENST00000618449.4

CPEB1-216, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-216ENST00000618449 GUCY1B3Q02153 619 aa13.1□□□□□ -0.31
CPEB1-216ENST00000618449 R3HDM1Q15032 1099 aaKnown RBP13.1□□□□□ -0.31
CPEB1-216ENST00000618449 HS1BP3Q53T59 392 aa13.1□□□□□ -0.31
CPEB1-216ENST00000618449 IFIT1BQ5T764 474 aaKnown RBP13.1□□□□□ -0.31
CPEB1-216ENST00000618449 HHIPL2Q6UWX4 724 aa13.1□□□□□ -0.31
CPEB1-216ENST00000618449 USP17L1Q7RTZ2 530 aa13.1□□□□□ -0.31
CPEB1-216ENST00000618449 KIAA0825Q8IV33 1275 aa13.1□□□□□ -0.31
CPEB1-216ENST00000618449 PHKBQ93100 1093 aa13.1□□□□□ -0.31
CPEB1-216ENST00000618449 SCAND2PQ9GZW5 306 aaPredicted RBP13.1□□□□□ -0.31
CPEB1-216ENST00000618449 TSPY2A6NKD2 308 aa13.1□□□□□ -0.31
CPEB1-216ENST00000618449 FKBP1AP62942 108 aaKnown RBP13.1□□□□□ -0.31
CPEB1-216ENST00000618449 GRIPAP1Q4V328 841 aa13.1□□□□□ -0.31
CPEB1-216ENST00000618449 CPLX2Q6PUV4 134 aaKnown RBP13.1□□□□□ -0.31
CPEB1-216ENST00000618449 ZSCAN30Q86W11 494 aa13.1□□□□□ -0.31
CPEB1-216ENST00000618449 RTKN2Q8IZC4 609 aa13.1□□□□□ -0.31
CPEB1-216ENST00000618449 KLHL34Q8N239 644 aa13.1□□□□□ -0.31
CPEB1-216ENST00000618449 SLC44A5Q8NCS7 719 aa13.1□□□□□ -0.31
CPEB1-216ENST00000618449 NUP133Q8WUM0 1156 aa13.1□□□□□ -0.31
CPEB1-216ENST00000618449 TEKT1Q969V4 418 aa13.1□□□□□ -0.31
CPEB1-216ENST00000618449 SPATA32Q96LK8 384 aa13.1□□□□□ -0.31
CPEB1-216ENST00000618449 ADAMTSL1Q8N6G6 1762 aa13.09□□□□□ -0.31
CPEB1-216ENST00000618449 DDX60LQ5H9U9 1706 aaKnown RBP13.09□□□□□ -0.31
CPEB1-216ENST00000618449 POLD1P28340 1107 aa13.09□□□□□ -0.31
CPEB1-216ENST00000618449 RCAN1P53805 252 aa13.09□□□□□ -0.31
CPEB1-216ENST00000618449 PICALMQ13492 652 aa13.09□□□□□ -0.31
CPEB1-216ENST00000618449 RTN1Q16799 776 aa13.09□□□□□ -0.31
CPEB1-216ENST00000618449 OTUD7BQ6GQQ9 843 aa13.09□□□□□ -0.31
CPEB1-216ENST00000618449 APOBEC3HQ6NTF7 200 aaKnown RBP13.09□□□□□ -0.31
CPEB1-216ENST00000618449 FANCBQ8NB91 859 aa13.09□□□□□ -0.31
CPEB1-216ENST00000618449 C8orf76Q96K31 380 aa13.09□□□□□ -0.31
CPEB1-216ENST00000618449 ZSCAN16Q9H4T2 348 aaPredicted RBP13.09□□□□□ -0.31
CPEB1-216ENST00000618449 MKNK2Q9HBH9 465 aa13.09□□□□□ -0.31
CPEB1-216ENST00000618449 GJB4Q9NTQ9 266 aa13.09□□□□□ -0.31
CPEB1-216ENST00000618449 YDJCA8MPS7 323 aa13.08□□□□□ -0.31
CPEB1-216ENST00000618449 WDHD1O75717 1129 aaPredicted RBP13.08□□□□□ -0.31
CPEB1-216ENST00000618449 IARSP41252 1262 aaKnown RBP13.08□□□□□ -0.31
CPEB1-216ENST00000618449 CRKP46108 304 aa13.08□□□□□ -0.31
CPEB1-216ENST00000618449 TGFB2P61812 414 aa13.08□□□□□ -0.31
CPEB1-216ENST00000618449 TFAP4Q01664 338 aa13.08□□□□□ -0.31
CPEB1-216ENST00000618449 LEO1Q8WVC0 666 aaPredicted RBP13.08□□□□□ -0.31
CPEB1-216ENST00000618449 PSMD1Q99460 953 aa13.08□□□□□ -0.31
CPEB1-216ENST00000618449 USP40Q9NVE5 1235 aa13.08□□□□□ -0.31
CPEB1-216ENST00000618449 ZNF646O15015 1829 aaPredicted RBP13.08□□□□□ -0.32
CPEB1-216ENST00000618449 UVSSAQ2YD98 709 aa13.08□□□□□ -0.32
CPEB1-216ENST00000618449 CDC42EP5Q6NZY7 148 aa13.08□□□□□ -0.32
CPEB1-216ENST00000618449 FBXO18Q8NFZ0 1043 aa13.08□□□□□ -0.32
CPEB1-216ENST00000618449 AIFM3Q96NN9 605 aa13.08□□□□□ -0.32
CPEB1-216ENST00000618449 DDX4Q9NQI0 724 aaKnown RBP13.08□□□□□ -0.32
CPEB1-216ENST00000618449 TFIP11Q9UBB9 837 aaKnown RBP13.08□□□□□ -0.32
CPEB1-216ENST00000618449 FOCADQ5VW36 1801 aa13.08□□□□□ -0.32
CPEB1-216ENST00000618449 UBE2Q2LH0YL09 131 aa13.07□□□□□ -0.32
CPEB1-216ENST00000618449 IFNAR1P17181 557 aa13.07□□□□□ -0.32
CPEB1-216ENST00000618449 CATIPQ7Z7H3 387 aa13.07□□□□□ -0.32
CPEB1-216ENST00000618449 CMTR1Q8N1G2 835 aaKnown RBP13.07□□□□□ -0.32
CPEB1-216ENST00000618449 FUCA2Q9BTY2 467 aa13.07□□□□□ -0.32
CPEB1-216ENST00000618449 ZNF277Q9NRM2 450 aaPredicted RBP13.07□□□□□ -0.32
CPEB1-216ENST00000618449 IL17RBQ9NRM6 502 aa13.07□□□□□ -0.32
CPEB1-216ENST00000618449 PIM2Q9P1W9 311 aa13.07□□□□□ -0.32
CPEB1-216ENST00000618449 PCDHAC2Q9Y5I4 1007 aa13.07□□□□□ -0.32
CPEB1-216ENST00000618449 CCDC196A0A1B0GTZ2 297 aa13.07□□□□□ -0.32
CPEB1-216ENST00000618449 LIG1P18858 919 aa13.07□□□□□ -0.32
CPEB1-216ENST00000618449 NT5C2P49902 561 aa13.07□□□□□ -0.32
CPEB1-216ENST00000618449 TROAPQ12815 778 aa13.07□□□□□ -0.32
CPEB1-216ENST00000618449 RCSD1Q6JBY9 416 aa13.07□□□□□ -0.32
CPEB1-216ENST00000618449 C16orf86Q6ZW13 317 aa13.07□□□□□ -0.32
CPEB1-216ENST00000618449 ILDR1Q86SU0 546 aaPredicted RBP13.07□□□□□ -0.32
CPEB1-216ENST00000618449 ZDHHC15Q96MV8 337 aa13.07□□□□□ -0.32
CPEB1-216ENST00000618449 ALG1Q9BT22 464 aa13.07□□□□□ -0.32
CPEB1-216ENST00000618449 MRIQ9BWK5 157 aa13.07□□□□□ -0.32
CPEB1-216ENST00000618449 SLC26A6Q9BXS9 759 aa13.07□□□□□ -0.32
CPEB1-216ENST00000618449 MYH1P12882 1939 aa13.07□□□□□ -0.32
CPEB1-216ENST00000618449 FMNL1O95466 1100 aaPredicted RBP13.06□□□□□ -0.32
CPEB1-216ENST00000618449 RASA1P20936 1047 aa13.06□□□□□ -0.32
CPEB1-216ENST00000618449 CDK8P49336 464 aa13.06□□□□□ -0.32
CPEB1-216ENST00000618449 SSRP1Q08945 709 aaKnown RBP13.06□□□□□ -0.32
CPEB1-216ENST00000618449 ZNF444Q8N0Y2 327 aaPredicted RBP13.06□□□□□ -0.32
CPEB1-216ENST00000618449 CCDC82Q8N4S0 544 aa13.06□□□□□ -0.32
CPEB1-216ENST00000618449 PPP1R1BQ9UD71 204 aaPredicted RBP13.06□□□□□ -0.32
CPEB1-216ENST00000618449 GOLGA6L4A6NEF3 574 aa13.06□□□□□ -0.32
CPEB1-216ENST00000618449 TSPY3P0CV98 308 aa13.06□□□□□ -0.32
CPEB1-216ENST00000618449 TSPY8P0CW00 308 aa13.06□□□□□ -0.32
CPEB1-216ENST00000618449 MSNP26038 577 aaKnown RBP13.06□□□□□ -0.32
CPEB1-216ENST00000618449 NBPF11Q86T75 865 aa13.06□□□□□ -0.32
CPEB1-216ENST00000618449 LARGE2Q8N3Y3 721 aa13.06□□□□□ -0.32
CPEB1-216ENST00000618449 UPF1Q92900 1129 aaKnown RBP eCLIP13.06□□□□□ -0.32
CPEB1-216ENST00000618449 NUP62CLQ9H1M0 184 aa13.06□□□□□ -0.32
CPEB1-216ENST00000618449 ZNF287Q9HBT7 754 aa13.06□□□□□ -0.32
CPEB1-216ENST00000618449 STK36Q9NRP7 1315 aa13.06□□□□□ -0.32
CPEB1-216ENST00000618449 RBM5P52756 815 aaKnown RBP eCLIP13.05□□□□□ -0.32
CPEB1-216ENST00000618449 HDLBPQ00341 1268 aaKnown RBP13.05□□□□□ -0.32
CPEB1-216ENST00000618449 NFIAQ12857 509 aa13.05□□□□□ -0.32
CPEB1-216ENST00000618449 PPP2R5BQ15173 497 aa13.05□□□□□ -0.32
CPEB1-216ENST00000618449 CRACR2BQ8N4Y2 399 aaPredicted RBP13.05□□□□□ -0.32
CPEB1-216ENST00000618449 NAP1L5Q96NT1 182 aaPredicted RBP13.05□□□□□ -0.32
CPEB1-216ENST00000618449 CCDC39Q9UFE4 941 aa13.05□□□□□ -0.32
CPEB1-216ENST00000618449 TAOK2Q9UL54 1235 aa13.05□□□□□ -0.32
CPEB1-216ENST00000618449 COL4A5P29400 1685 aa13.05□□□□□ -0.32
CPEB1-216ENST00000618449 ECM29Q5VYK3 1845 aa13.05□□□□□ -0.32
CPEB1-216ENST00000618449 DDAH1O94760 285 aa13.05□□□□□ -0.32
CPEB1-216ENST00000618449 CALM1P0DP23 149 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms