RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 DEFB129Q9H1M3 183 aa9.52□□□□□ -0.89
TARDBP-219ENST00000617757 TAF1DQ9H5J8 278 aaPredicted RBP9.52□□□□□ -0.89
TARDBP-219ENST00000617757 DNAJC18Q9H819 358 aa9.52□□□□□ -0.89
TARDBP-219ENST00000617757 ZNF287Q9HBT7 754 aa9.52□□□□□ -0.89
TARDBP-219ENST00000617757 GGA3Q9NZ52 723 aa9.52□□□□□ -0.89
TARDBP-219ENST00000617757 TAOK2Q9UL54 1235 aa9.52□□□□□ -0.89
TARDBP-219ENST00000617757 PAPPA2Q9BXP8 1791 aa9.51□□□□□ -0.89
TARDBP-219ENST00000617757 TFAP4Q01664 338 aa9.51□□□□□ -0.89
TARDBP-219ENST00000617757 MAP3K10Q02779 954 aa9.51□□□□□ -0.89
TARDBP-219ENST00000617757 FAM47AQ5JRC9 791 aa9.51□□□□□ -0.89
TARDBP-219ENST00000617757 PNMA8AQ86V59 439 aaPredicted RBP9.51□□□□□ -0.89
TARDBP-219ENST00000617757 ZC3H15Q8WU90 426 aaKnown RBP9.51□□□□□ -0.89
TARDBP-219ENST00000617757 TMEM87BQ96K49 555 aa9.51□□□□□ -0.89
TARDBP-219ENST00000617757 ZKSCAN3Q9BRR0 538 aa9.51□□□□□ -0.89
TARDBP-219ENST00000617757 MTA3Q9BTC8 594 aa9.51□□□□□ -0.89
TARDBP-219ENST00000617757 TBC1D2Q9BYX2 928 aa9.51□□□□□ -0.89
TARDBP-219ENST00000617757 RRAGCQ9HB90 399 aa9.51□□□□□ -0.89
TARDBP-219ENST00000617757 FOXD4L1Q9NU39 408 aa9.51□□□□□ -0.89
TARDBP-219ENST00000617757 HERC5Q9UII4 1024 aaKnown RBP9.51□□□□□ -0.89
TARDBP-219ENST00000617757 OTOFQ9HC10 1997 aa9.51□□□□□ -0.89
TARDBP-219ENST00000617757 PHIPQ8WWQ0 1821 aa9.5□□□□□ -0.89
TARDBP-219ENST00000617757 TSPY2A6NKD2 308 aa9.5□□□□□ -0.89
TARDBP-219ENST00000617757 FAM196BA6NMK8 535 aa9.5□□□□□ -0.89
TARDBP-219ENST00000617757 TBC1D12O60347 775 aa9.5□□□□□ -0.89
TARDBP-219ENST00000617757 VEGFAP15692 232 aaPredicted RBP9.5□□□□□ -0.89
TARDBP-219ENST00000617757 MCM2P49736 904 aa9.5□□□□□ -0.89
TARDBP-219ENST00000617757 FGD1P98174 961 aa9.5□□□□□ -0.89
TARDBP-219ENST00000617757 BECN1Q14457 450 aa9.5□□□□□ -0.89
TARDBP-219ENST00000617757 ANKRD1Q15327 319 aa9.5□□□□□ -0.89
TARDBP-219ENST00000617757 NBPF12Q5TAG4 269 aaPredicted RBP9.5□□□□□ -0.89
TARDBP-219ENST00000617757 NOL8Q76FK4 1167 aaKnown RBP9.5□□□□□ -0.89
TARDBP-219ENST00000617757 HSCBQ8IWL3 235 aa9.5□□□□□ -0.89
TARDBP-219ENST00000617757 IGDCC4Q8TDY8 1250 aa9.5□□□□□ -0.89
TARDBP-219ENST00000617757 BRF1Q92994 677 aa9.5□□□□□ -0.89
TARDBP-219ENST00000617757 DCPSQ96C86 337 aaKnown RBP9.5□□□□□ -0.89
TARDBP-219ENST00000617757 TRIM34Q9BYJ4 488 aa9.5□□□□□ -0.89
TARDBP-219ENST00000617757 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.5□□□□□ -0.89
TARDBP-219ENST00000617757 GPHNQ9NQX3 736 aaPredicted RBP9.5□□□□□ -0.89
TARDBP-219ENST00000617757 PPP2R3BQ9Y5P8 575 aa9.5□□□□□ -0.89
TARDBP-219ENST00000617757 MYH6P13533 1939 aa9.5□□□□□ -0.89
TARDBP-219ENST00000617757 PLIN4Q96Q06 1357 aa9.5□□□□□ -0.89
TARDBP-219ENST00000617757 TRPM7Q96QT4 1865 aa9.49□□□□□ -0.89
TARDBP-219ENST00000617757 K7ELQ4 463 aaPredicted RBP9.49□□□□□ -0.89
TARDBP-219ENST00000617757 SH2B2O14492 632 aaPredicted RBP9.49□□□□□ -0.89
TARDBP-219ENST00000617757 IFIT3O14879 490 aaKnown RBP9.49□□□□□ -0.89
TARDBP-219ENST00000617757 TSPY3P0CV98 308 aa9.49□□□□□ -0.89
TARDBP-219ENST00000617757 TSPY8P0CW00 308 aa9.49□□□□□ -0.89
TARDBP-219ENST00000617757 AKR1B1P15121 316 aa9.49□□□□□ -0.89
TARDBP-219ENST00000617757 LIFRP42702 1097 aa9.49□□□□□ -0.89
TARDBP-219ENST00000617757 APOBRQ0VD83 1088 aa9.49□□□□□ -0.89
TARDBP-219ENST00000617757 SART3Q15020 963 aaKnown RBP9.49□□□□□ -0.89
TARDBP-219ENST00000617757 SEC23AQ15436 765 aa9.49□□□□□ -0.89
TARDBP-219ENST00000617757 CERKLQ49MI3 558 aaPredicted RBP9.49□□□□□ -0.89
TARDBP-219ENST00000617757 EAPPQ56P03 285 aaPredicted RBP9.49□□□□□ -0.89
TARDBP-219ENST00000617757 MIGA2Q7L4E1 593 aa9.49□□□□□ -0.89
TARDBP-219ENST00000617757 IQCA1Q86XH1 822 aa9.49□□□□□ -0.89
TARDBP-219ENST00000617757 NEDD1Q8NHV4 660 aa9.49□□□□□ -0.89
TARDBP-219ENST00000617757 CCDC17Q96LX7 622 aa9.49□□□□□ -0.89
TARDBP-219ENST00000617757 ZSCAN10Q96SZ4 725 aaPredicted RBP9.49□□□□□ -0.89
TARDBP-219ENST00000617757 LARP6Q9BRS8 491 aaKnown RBP9.49□□□□□ -0.89
TARDBP-219ENST00000617757 LY9Q9HBG7 655 aa9.49□□□□□ -0.89
TARDBP-219ENST00000617757 SENP2Q9HC62 589 aa9.49□□□□□ -0.89
TARDBP-219ENST00000617757 IL17RBQ9NRM6 502 aa9.49□□□□□ -0.89
TARDBP-219ENST00000617757 TCP11L1Q9NUJ3 509 aa9.49□□□□□ -0.89
TARDBP-219ENST00000617757 ANGEL1Q9UNK9 670 aaKnown RBP9.49□□□□□ -0.89
TARDBP-219ENST00000617757 LIMCH1Q9UPQ0 1083 aa9.49□□□□□ -0.89
TARDBP-219ENST00000617757 TNKSO95271 1327 aa9.49□□□□□ -0.89
TARDBP-219ENST00000617757 IGKV6D-41A0A0C4DH26 115 aa9.48□□□□□ -0.89
TARDBP-219ENST00000617757 ERICH2A1L162 156 aa9.48□□□□□ -0.89
TARDBP-219ENST00000617757 ADM5C9JUS6 153 aa9.48□□□□□ -0.89
TARDBP-219ENST00000617757 NMT2O60551 498 aa9.48□□□□□ -0.89
TARDBP-219ENST00000617757 LARGE1O95461 756 aa9.48□□□□□ -0.89
TARDBP-219ENST00000617757 POTEIP0CG38 1075 aa9.48□□□□□ -0.89
TARDBP-219ENST00000617757 POTEJP0CG39 1038 aa9.48□□□□□ -0.89
TARDBP-219ENST00000617757 EVCP57679 992 aa9.48□□□□□ -0.89
TARDBP-219ENST00000617757 RRP1BQ14684 758 aaKnown RBP9.48□□□□□ -0.89
TARDBP-219ENST00000617757 WTAPQ15007 396 aa9.48□□□□□ -0.89
TARDBP-219ENST00000617757 ME3Q16798 604 aa9.48□□□□□ -0.89
TARDBP-219ENST00000617757 CCDC178Q5BJE1 867 aa9.48□□□□□ -0.89
TARDBP-219ENST00000617757 TMEM67Q5HYA8 995 aa9.48□□□□□ -0.89
TARDBP-219ENST00000617757 PRAMEF18Q5VWM3 479 aa9.48□□□□□ -0.89
TARDBP-219ENST00000617757 USP48Q86UV5 1035 aa9.48□□□□□ -0.89
TARDBP-219ENST00000617757 SULF1Q8IWU6 871 aa9.48□□□□□ -0.89
TARDBP-219ENST00000617757 ENAHQ8N8S7 591 aaPredicted RBP9.48□□□□□ -0.89
TARDBP-219ENST00000617757 HOOK2Q96ED9 719 aa9.48□□□□□ -0.89
TARDBP-219ENST00000617757 ZSCAN31Q96LW9 406 aaPredicted RBP9.48□□□□□ -0.89
TARDBP-219ENST00000617757 IPO9Q96P70 1041 aaKnown RBP9.48□□□□□ -0.89
TARDBP-219ENST00000617757 UBAC1Q9BSL1 405 aa9.48□□□□□ -0.89
TARDBP-219ENST00000617757 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.48□□□□□ -0.89
TARDBP-219ENST00000617757 TPCN1Q9ULQ1 816 aa9.48□□□□□ -0.89
TARDBP-219ENST00000617757 CLEC11AQ9Y240 323 aa9.48□□□□□ -0.89
TARDBP-219ENST00000617757 SSC5DA1L4H1 1573 aa9.48□□□□□ -0.89
TARDBP-219ENST00000617757 KLF18A0A0U1RQI7 1052 aa9.47□□□□□ -0.89
TARDBP-219ENST00000617757 PHF20L1A8MW92 1017 aa9.47□□□□□ -0.89
TARDBP-219ENST00000617757 MPHOSPH10O00566 681 aaKnown RBP9.47□□□□□ -0.89
TARDBP-219ENST00000617757 GDF11O95390 407 aa9.47□□□□□ -0.89
TARDBP-219ENST00000617757 NOVP48745 357 aa9.47□□□□□ -0.89
TARDBP-219ENST00000617757 JAG1P78504 1218 aa9.47□□□□□ -0.89
TARDBP-219ENST00000617757 ABCB5Q2M3G0 1257 aa9.47□□□□□ -0.89
TARDBP-219ENST00000617757 SUPT20HL1Q3ZLR7 823 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms